Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G12
         (620 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K2N3 Cluster: Putative uncharacterized protein; n=2; ...    33   7.3  

>UniRef50_A5K2N3 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2173

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = -1

Query: 389  FQNYVYQM-VKNCKSFTV*LLNGLFVSMFYSDR*LNNHVFA-LS*INRMSFSSVISPNRS 216
            FQ Y+ +M V+N   F    LN  F+S+FY +  +NN++F  ++ +N     +  S    
Sbjct: 1248 FQYYIEKMEVRNLNQF----LN--FISLFYQNE-INNNIFLFINLLNESLLDTTSSHKCG 1300

Query: 215  QY*MSKSELKLLTYFDNFI*HF 150
             Y    S L+ L +F  F+ H+
Sbjct: 1301 SYKEHSSFLRALKFFSFFLEHY 1322


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,741,420
Number of Sequences: 1657284
Number of extensions: 8087805
Number of successful extensions: 13437
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13436
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)