Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G09
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 301 5e-83
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 155 5e-39
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 151 1e-37
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 146 4e-36
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 144 1e-35
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 134 2e-32
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 126 5e-30
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 122 8e-29
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 105 9e-24
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 86 5e-18
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 83 3e-17
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 83 4e-17
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 78 2e-15
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 73 3e-14
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 73 6e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 73 6e-14
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 67 3e-12
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 66 7e-12
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 44 2e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 44 2e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 42 1e-04
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 38 0.002
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 31 0.24
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 30 0.42
SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 28 1.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 27 3.0
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 27 3.0
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 27 3.0
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 27 3.0
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.0
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 5.2
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 5.2
SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.9
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 26 6.9
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 26 6.9
SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase comp... 26 6.9
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 26 6.9
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 301 bits (740), Expect = 5e-83
Identities = 143/180 (79%), Positives = 160/180 (88%)
Frame = +1
Query: 169 SGEFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 348
S + LRKFKLVFLGEQSVGKTSLITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVR
Sbjct: 2 SENYSFSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVR 61
Query: 349 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIML 528
LQLWDTAGQERFRSLIPSYIRDS+VA++VYDITN NSF T KWI+DVR ERG DVII+L
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVL 121
Query: 529 VGNKTDLSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENK 708
VGNKTDL+DKRQV+ EEG+KKAKEL +M +ETSAKAG+NVK LFR++A LPGM++ E +
Sbjct: 122 VGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVETQ 181
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 155 bits (377), Expect = 5e-39
Identities = 73/163 (44%), Positives = 111/163 (68%), Gaps = 2/163 (1%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQE 378
KLV LG+ +VGK+SL+ RF+ D FD+ ++TIG FL++T+ +++ T V+L++WDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 379 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLS-D 555
R++SL P Y R++ A+VVYDIT A S + WI +++ + ++I L GNK DL+ +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 556 KRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 684
+R V + + A E N++F ETSAK NV +LF +A LP
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 151 bits (366), Expect = 1e-37
Identities = 68/157 (43%), Positives = 107/157 (68%)
Frame = +1
Query: 199 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 378
FK V +G+ VGK++L+ RF + F+ ++TIG++F ++ + L+++ ++ Q+WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 379 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDK 558
R+R++ +Y R + A++VYDIT +SF +W+ ++R S+++IMLVGNKTDL
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 559 RQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRV 669
R VSTEE A E N+ FIETSA NV++ F+ V
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTV 167
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 146 bits (353), Expect = 4e-36
Identities = 67/154 (43%), Positives = 102/154 (66%)
Frame = +1
Query: 199 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 378
FKL+ +G+ VGK+ L+ RF D++ +Y +TIG+DF +T LE +TV+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 379 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDK 558
RFR++ SY R + ++VYD+T+ +SF+ +W+ ++ V +LVGNK+D+ DK
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 559 RQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 660
+ V + A LN+ F+ETSAK NV+Q F
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAF 162
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 144 bits (349), Expect = 1e-35
Identities = 70/170 (41%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
KL+ +G+ VGK+ L+ RF DSF ++ TIGIDF +T+ L+ + ++LQ+WDTAGQER
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKR 561
FR++ +Y R + +++YD+T+ SF W +V +V +L+GNK D D+R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 562 QVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMD-SAENK 708
QVS E+G A EL V F+E SAK NV + F +A + AEN+
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENE 180
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 134 bits (323), Expect = 2e-32
Identities = 64/165 (38%), Positives = 105/165 (63%), Gaps = 5/165 (3%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYL----EDRTVRLQLWDTA 369
K+V G GK+ L+ RF+ + +D+ T+GIDF S+ + + + + ++LQ+WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 370 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDL 549
GQE+FRS+ +Y R + AV+VYD+TN +SF + S W+ D+R S + ++L G+K+DL
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 550 SDKRQVSTEEGDKKAKELNVMFI-ETSAKAGYNVKQLFRRVAAAL 681
++RQVSTEE + E ++ ETS+ G NV++ F V + +
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTI 175
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 126 bits (303), Expect = 5e-30
Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Frame = +1
Query: 181 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 360
G K++ LGE VGKTS++ +++ F Y+ATIG DFL+K + ++D+ V LQLW
Sbjct: 3 GKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLW 62
Query: 361 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG----SDVIIML 528
DTAGQERF+SL ++ R + V+VYD+ N+ SF W D+ + +L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFIL 122
Query: 529 VGNKTDLSD-KRQVSTEEGDKKAKEL-NVMFIETSAKAGYNVKQLFRRVA-AALPGMDS 696
+GNK D+ + KR VS + + + + ETSAK NV++ F VA AL MDS
Sbjct: 123 LGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDS 181
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 122 bits (293), Expect = 8e-29
Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
K+V LG+ VGKT L+ +F+ F Y+ATIG DFL+K + ++D+ V LQLWDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI---IMLVGNKTDL- 549
F+SL ++ R + V+VY++ N+ SF W + + D ++VGN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 550 SDKRQVSTEEG---DKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPED 720
+ KR VS K N++ E SAK NV LF V+ +S+ + D
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENESSRDDFVND 189
Query: 721 MHEVILXQSPGDN 759
E +L P +N
Sbjct: 190 FSEPLLLSKPLNN 202
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 105 bits (251), Expect = 9e-24
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Frame = +1
Query: 190 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 369
LR++KLV +G+ VGK++L + + F + Y TI D K ++ L + DTA
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIE-DSYRKKCEIDGEGALLDVLDTA 64
Query: 370 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI-IMLVGNKTD 546
GQE + ++ Y+R ++VY+IT+ +SF + S + + + D ++LV NK D
Sbjct: 65 GQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCD 124
Query: 547 LSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMH 726
L +R VS EG++ AK ++ +++ETSAK NV++ F + + + +E K ++
Sbjct: 125 LEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKGFQNKQ 184
Query: 727 EVILXQSPGDNKEQDS 774
V Q P ++ S
Sbjct: 185 AVQTAQVPASTAKRAS 200
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 86.2 bits (204), Expect = 5e-18
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 187 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 366
P++ ++ LG +SVGK+SL +++ + F +Y TI F SK + + + ++ DT
Sbjct: 3 PIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDT 61
Query: 367 AGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD-VIIMLVGNKT 543
AGQ+ + L + V+VY IT+ +SF D + G++ V I++VGNK+
Sbjct: 62 AGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKS 121
Query: 544 DLSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPED 720
DL +R V+ EEG A E + E SA+ NV + F + + + A PP D
Sbjct: 122 DLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEIE--KQANPSPPGD 178
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 83.4 bits (197), Expect = 3e-17
Identities = 47/168 (27%), Positives = 85/168 (50%)
Frame = +1
Query: 199 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 378
FKLV +G+ GKT+ + R + F+ Y AT+G++ + + +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 379 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDK 558
+ L Y ++++D+T+ ++ W D+ ++ I+L GNK D+ +
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKE- 127
Query: 559 RQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAE 702
R+V + K+ N+ + + SAK+ YN ++ F +A L G + E
Sbjct: 128 RKVKAKAITFHRKK-NLQYYDISAKSNYNFEKPFLWLARKLVGNPNLE 174
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 83.0 bits (196), Expect = 4e-17
Identities = 42/164 (25%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
K+ +G+ S+GKTSL+ ++ SFD T+G++F+ KT+ + + + +WD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD----- 546
F +++P D+ + ++D++ ++ + +W R + V I L+G K D
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPI-LIGTKYDHFMTF 130
Query: 547 -LSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAA 675
D+ ++ T++ + AK + + S NV+++F+ V A
Sbjct: 131 PREDQEEI-TKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLA 173
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 77.8 bits (183), Expect = 2e-15
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
K+V LG+ + GKTSL+ F F Y+ TI +++ ++++ ++ L LWDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHD-IFVDGNSIELSLWDTAGQEE 73
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL--S 552
+ L D+ V ++ + + + +S +KW+ +V + V ++LV K DL +
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEV-SSNCPGVKLVLVALKCDLRGA 132
Query: 553 DKRQV------STEEGDKKAKELN-VMFIETSAKAGYNVKQLFRRVA 672
D+ QV EEG AK++N V ++E SAK V + F A
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAA 179
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 73.3 bits (172), Expect = 3e-14
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
KLV +G+ + GKT L+ F +F Y T+ ++++ + ++ R V L LWDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL--- 549
+ L P DS V ++ + + + +S KWI +V S + I+LV K DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADLRND 125
Query: 550 ---------SDKRQVSTEEGDKKAKELNV-MFIETSAKAGYNVKQLFRRVAAA 678
+++ V+TEEG A+++ ++E SAK V+++F A
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRA 178
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 72.5 bits (170), Expect = 6e-14
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
KLV +G+ + GKT L+ F +F Y T+ ++++ + ++ R + L LWDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL--- 549
+ L P DS V ++ + + S KWI +V S++ I+LVG K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDLRND 125
Query: 550 ---------SDKRQVSTEEGDKKAKELNV-MFIETSAKAGYNVKQLFRRVAAA 678
+ ++ ++ EEG A+++ ++E SAK V ++F A A
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARA 178
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 72.5 bits (170), Expect = 6e-14
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Frame = +1
Query: 187 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 366
P+R+ KLV +G+ + GKTSL++ F F Y T+ +++S ++ ++V+L LWDT
Sbjct: 6 PIRR-KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCR-VDGKSVQLALWDT 63
Query: 367 AGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS-KWIDDVRTERGSDVIIMLVGNKT 543
AGQE + L P + + +V + I + +S S KWI+++ T +V +LVG K
Sbjct: 64 AGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINT-LCPNVPFILVGMKA 122
Query: 544 DL-SD-------KRQ----VSTEEGDKKAKELNV-MFIETSAKAGYNVKQLFRRVA-AAL 681
DL SD +R+ V +++ + A+ + ++E S+ G V +F AAL
Sbjct: 123 DLRSDPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAAL 182
Query: 682 PGMDSAENK 708
DS +K
Sbjct: 183 TVRDSENDK 191
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 66.9 bits (156), Expect = 3e-12
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
K V +G+ +VGKT L+ + + F + Y T+ D + T+ + D L L+DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDLSD- 555
+ L P + V +V + +T+ SF KW +V V ++VG + DL D
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVH-HHCPGVPCLIVGTQIDLRDD 122
Query: 556 -----------KRQVSTEEGDKKAKELN-VMFIETSAKAGYNVKQLF-RRVAAAL 681
+ ++ E+G++ A+EL V ++E SA +K +F + AAL
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAAL 177
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 65.7 bits (153), Expect = 7e-12
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMY-LEDRTVRLQLWDTAGQE 378
KLV +G+ GKT L+ F +F Y T+ ++++ Y + + L LWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 379 RFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKWIDDVRTERGSDVIIMLVGNKTDLSD 555
+ L P +S V ++ + I S + T KW +V+ I+LVG K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVGLKADLRK 134
Query: 556 KRQ------------VSTEEGDKKAKELNVMFIETSAKAGYNVKQLFR 663
R V+ ++ A +N ++E SAK V ++F+
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQ 182
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.4 bits (100), Expect = 2e-05
Identities = 25/120 (20%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +1
Query: 193 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 372
++ +++ LG + GKT+++ + + T T+G + + T + ++ +WD G
Sbjct: 20 KEMRILMLGLDAAGKTTILYKLKLNQSVVTIP-TVGFNVETVTY----KNIKFNVWDVGG 74
Query: 373 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDL 549
Q++ R L Y + + V D ++N + + + + ++R D +++++ NK DL
Sbjct: 75 QDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 44.0 bits (99), Expect = 2e-05
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Frame = +1
Query: 193 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 372
R+ +++ LG + GKT+++ + + N T G F +T+ +E +R +WD G
Sbjct: 15 REVRVLLLGLDNAGKTTILKCLLNEDV-NEVSPTFG--FQIRTLEVEG--LRFTIWDIGG 69
Query: 373 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRT-ERGSDVIIMLVGNKTDL 549
Q+ R+ +Y + + V D + + + ++ E+ I+++ NK+D+
Sbjct: 70 QKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDV 129
Query: 550 S---DKRQVSTEEGDKKAKELNVMFIETSAKAGYNVK 651
S ++S K K + SA G N+K
Sbjct: 130 SGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIK 166
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 41.9 bits (94), Expect = 1e-04
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +1
Query: 193 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 372
R+ +++ +G + GKT+++ + T TIG + + +E R + +WD G
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYRNISFTVWDVGG 70
Query: 373 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-RGSDVIIMLVGNKTDL 549
Q++ R L Y +++ + V D + + + + + E D ++++ NK DL
Sbjct: 71 QDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 37.9 bits (84), Expect = 0.002
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Frame = +1
Query: 190 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 369
+++ ++V G+Q VGK+SLI+ + + + I + D V L L DT
Sbjct: 1 MKEVRVVICGDQGVGKSSLISALIQEDNVTSIPKVFPIISIPSNPDSND-DVSLVLVDTQ 59
Query: 370 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS-KWIDDVRTERGSDVIIMLVGNKT- 543
R + + I+ + V +VY ++ S+ + S W+ R+ G +V I+L NK+
Sbjct: 60 SDSNEREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRS-LGVNVPIVLCENKSE 116
Query: 544 DLSDKRQVSTEEGD-----KKAKELNVMFIETSAKAGYNVKQLF 660
DL + + + T E + + KE+ + SA NV +LF
Sbjct: 117 DLDNYQGLHTIEHEMIPLINEFKEIEACIL-CSALEKINVNELF 159
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 30.7 bits (66), Expect = 0.24
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 205 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLE--DRTVRLQLWDTAG 372
L+ +GE S+GKT+ + F+ S D ++ +DF+ L D+ L + DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFL-QSNDTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.42
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = +1
Query: 202 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 381
K++FLG + GKT+L+ D Q T+ + L VR +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLLHMLKNDRL-AVMQPTLH----PTSEELAIGNVRFTTFDLGGHQQ 76
Query: 382 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTERGSDVIIMLVGNKTD 546
R L Y + V + D + ++ +D + E + V +++GNK D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 175
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 436 YDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGDKKAKELNVMF 615
++ N S Q DD+ T +GSD KT ++D S K+KE V+F
Sbjct: 67 HEPANVYSIEQRRSHDDDLPTIKGSDASTQQYERKTYITDASPESQNLFLSKSKEEGVIF 126
Query: 616 I 618
+
Sbjct: 127 L 127
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.3
Identities = 34/146 (23%), Positives = 65/146 (44%)
Frame = -3
Query: 734 ITSCMSSGGLFSAESMPGRAAATLRNNCLTL*PALALVSMNITFSSLAFLSPSSVETCLL 555
I+S M+S L S+ S+P +++ ++ T+ ++ S+ TFSS++ + SS +
Sbjct: 531 ISSPMTSV-LSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSS 589
Query: 554 SERSVLLPTNMMMTSEPRSVRTSSIHFEVWWNEFALVIS*TTTATVESLMYEGMRDRNRS 375
+ S+ + S + SSI + + + ++S + T + SLM + S
Sbjct: 590 TSLSISSSSTSSTFSSASTSSPSSISSSI--SSSSTILS-SPTPSTSSLMISSSSIISGS 646
Query: 374 WPAVSHSWSRTVRSSKYIVFDRKSIP 297
+S S S SS + IP
Sbjct: 647 SSILSSSISTIPISSSLSTYSSSVIP 672
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = -3
Query: 773 LSCSLLSPGDCXKITSCMSSGG-LFSAESMPGRAAATLRNNCLTL*PALALVSMNITFSS 597
LS S LS + TS SS L+ + P A++ + L+ + + N +
Sbjct: 228 LSVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSS-QTVKTTTSNASRQP 286
Query: 596 LAFLSPSSVETCLLSERSVLLPTNMMMTSEPRSVRTSS 483
+S S + + S VLL + TSE + +R ++
Sbjct: 287 SPLVSSKSTDNIIRSHSPVLLTPQTLSTSETKHIRPNN 324
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = -3
Query: 452 ALVIS*TTTATVESLMYEGMRDRNRSWPAVSHSWSRTVRSSKYIVFDRKSIPI 294
+++I+ + T + G+ D + W ++++WS + K+I + SIP+
Sbjct: 7 SVIINPSVAHTATVIFLHGLGDSGQGWSFMANTWS-NFKHIKWIFPNAPSIPV 58
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 27.1 bits (57), Expect = 3.0
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +1
Query: 190 LRKFKLVFLGEQSVGKTSL--ITRFMYDSFDNT-YQATIGIDFLSKTMYLEDRTVRLQLW 360
+RK K++ +G GK+S+ I Y + D ATI I+ S +L + L LW
Sbjct: 1 MRK-KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEH-SHVRFLGNLV--LNLW 56
Query: 361 DTAGQERFRSLIPSYIRD---STVAVVVY 438
D GQE F S RD V V++Y
Sbjct: 57 DCGGQEAFMENYLSAQRDHIFRNVQVLIY 85
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 772 CPAPCCRRAIVSRSPRACLREVCFRQSPCQAGQQLLFG 659
CPAP C AI +A L V C G+Q FG
Sbjct: 217 CPAPDCEFAIECHVTQASLSSV-VPTVTCNCGKQFCFG 253
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 301 IDFLSKTMYLEDRTVRLQLWDTAGQE-RFRSLIPSYIRDSTVAVVVYDITN 450
I F + Y ED T + + +A + +F+SLI Y DST+A Y+ N
Sbjct: 27 ISFCTCKAYFEDNTSLSRRFFSAKKSLQFKSLIRKYSEDSTLAWRDYENYN 77
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 259 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVA 426
+Y FD+ Y + D+LS L ++ W+ + R +PSY S +A
Sbjct: 1167 LYSEFDSIYLNSSTSDYLSLNSILRVLQGKMVKWEQRFLDYQRLYLPSYKELSKIA 1222
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 276 QYLSGNNWN 302
QYLSGNNWN
Sbjct: 1173 QYLSGNNWN 1181
>SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 25.8 bits (54), Expect = 6.9
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = -2
Query: 426 RHSRISYV*R--YEGPEPLLARSVPQLESHRTVF---QVHSLR*KIYSNCCLISIVEAVV 262
RHS ++Y+ +E L ++ +L S + Q+ SLR ++SN + +E +V
Sbjct: 114 RHSHLNYLSEADFENCSYLFRTALSELRSEKINMRKDQISSLRSGLFSNQREVESLEQLV 173
Query: 261 HESSDERRLPNTLFAEKDK 205
HE ++ + + E K
Sbjct: 174 HEQLNKLNTESKMEFENRK 192
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 281 VLSKLSYMNLVMRDVFPTLCSPR 213
+LS + +NL+ D+F T+ SPR
Sbjct: 819 LLSVMDLINLLYTDIFSTISSPR 841
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 571 TEEGDKKAKELNVMFIETSAKAGYNVK 651
TEEGD K+ ELN +++ K+ K
Sbjct: 60 TEEGDSKSSELNDDYLDAHRKSSTKKK 86
>SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase complex
II subunit Rpb7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 484 DDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGD 585
+D E+GS+V + +VG +TD ++ ++T + D
Sbjct: 134 EDQVIEKGSNVRLKIVGTRTDATEIFAIATMKED 167
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 562 QVSTEEGDKKAKELNVMFIETSAKAG-YNVKQLFRRVAAALPGMDSA 699
++ +E KKAKEL+ +F +TS G ++ + + LPG DS+
Sbjct: 99 EIFFDEALKKAKELDDVFQKTSKVVGPFHGIPISLKDQVDLPGKDSS 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,217,700
Number of Sequences: 5004
Number of extensions: 65875
Number of successful extensions: 237
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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