Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G08
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    50   2e-06
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    48   6e-06
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    47   2e-05
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    46   4e-05
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780...    28   9.5  

>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 35/55 (63%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 338
           Y  +KQATVG  + A  PG+ A + +AK+DAW  + G SKE+A   YI  V+ L+
Sbjct: 30  YGLYKQATVGDVNTAR-PGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 335
           Y  +KQATVG  + +  PG+ A + +AK+DAW  + G SKE+A   YI  V+ L
Sbjct: 30  YGLYKQATVGDVNTSR-PGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQL 82


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/55 (43%), Positives = 32/55 (58%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 338
           Y  +KQATVG       PG+  LK + K+DAW  + G SKE+A   YI  V+ L+
Sbjct: 30  YGLYKQATVGPVTTGR-PGIFNLKDRYKWDAWKAVEGKSKEEAMADYITKVKQLL 83


>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 23/54 (42%), Positives = 31/54 (57%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 335
           Y  +K AT G    A  P  L LK +AK++AWHKL     E+A + YI +V+ L
Sbjct: 120 YGLYKIATEGPCT-APQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITVVDEL 172


>06_03_0237 +
           18576317-18576412,18577273-18577778,18577906-18578024,
           18578409-18578763,18578803-18578866,18578967-18579231,
           18579354-18579529
          Length = 526

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 486 HFCLKC-FFLRTQIHIDFIKLSCSYINERYFQGAKA 590
           H C+ C   LR  +H+   K+  +YI +RY +  K+
Sbjct: 467 HTCMFCTHMLRAFVHVQLEKIPAAYILKRYTKKVKS 502


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,363,905
Number of Sequences: 37544
Number of extensions: 349113
Number of successful extensions: 772
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)