Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G08
         (773 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3091| Best HMM Match : No HMM Matches (HMM E-Value=.)               41   0.001
SB_5622| Best HMM Match : DUF6 (HMM E-Value=2.6e-12)                   31   1.4  
SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1)                   28   7.3  
SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1)                   28   7.3  

>SB_3091| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 159

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIE 320
           Y  FKQAT G    +  PG   + GKAK+++WH+     +E A K Y++
Sbjct: 39  YGLFKQATEGPCKTSR-PGFWDIVGKAKWESWHQHGKMPQEKAMKIYVQ 86


>SB_5622| Best HMM Match : DUF6 (HMM E-Value=2.6e-12)
          Length = 224

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
 Frame = -1

Query: 305 LGILLRSAGQFVPSVKFGFTLQG*KTRAIGWI---GSSNCGLFEMGIQVKEL----GSSW 147
           LGILL + G F  S+K G +  G  + A+G++   G++ C    + IQ + +     S+W
Sbjct: 32  LGILLAAVGAFTMSIKGGLSNNGDSSEALGYVFLLGNTLCMSVYVLIQKRFIFNVEDSTW 91

Query: 146 KSXQXT 129
           +S   T
Sbjct: 92  RSKPVT 97


>SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1)
          Length = 175

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 247 VKPNLTLGTNWPALRRRMPRKPTSRSSKVS*LPSASK 357
           ++  + +GTN P LR R+ R+P  + +K   L  AS+
Sbjct: 134 IRDQIVVGTNSPVLRERLLREPELKLTKTINLCRASE 170


>SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1)
          Length = 175

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 247 VKPNLTLGTNWPALRRRMPRKPTSRSSKVS*LPSASK 357
           ++  + +GTN P LR R+ R+P  + +K   L  AS+
Sbjct: 134 IRDQIVVGTNSPVLRERLLREPELKLTKTINLCRASE 170


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,047,828
Number of Sequences: 59808
Number of extensions: 395501
Number of successful extensions: 861
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)