Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G08
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    66   3e-11
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    51   8e-07
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    34   0.098
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.098
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    34   0.098
U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 32/59 (54%), Positives = 41/59 (69%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASIG 350
           YA FKQ TVG  +  + PG+  LKGKAK+ AW +  G +K+DAQKAY+ +VE LIA  G
Sbjct: 28  YALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 341
           Y  FKQAT G       PG++   G+AK+DAW+ L G ++++A+  Y ++V GLI+
Sbjct: 52  YGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/58 (31%), Positives = 38/58 (65%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 347
           Y+ FKQA++G  +  + PG+ ++  + K+D+W +L G S+++A++ YI+ +  +   I
Sbjct: 34  YSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 32/98 (32%), Positives = 48/98 (48%)
 Frame = +3

Query: 75  FAQSVSPSQNLPKPQPTCSXXXXXXXXXXXXXXYAHFKQATVGAADPANSPGLLALKGKA 254
           F  +V   QNLPK  P  +              YA FKQAT G  D    P    ++G  
Sbjct: 4   FETAVFIVQNLPKDGPIKTSTDEKLNF------YALFKQATHGKCD-LPKPSFYDIQGVY 56

Query: 255 KFDAWHKLAGTSKEDAQKAYIEIVEGLIASIGLKE*KT 368
           K++AW+KL   + ++A++AY++ +   I  +  KE KT
Sbjct: 57  KWNAWNKLDNMTMDEAKQAYVDSIVQKIREV-QKEYKT 93


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 344
           Y  +KQA  G AD    P       + KF++W   +  S+  A +AY E++  L  S
Sbjct: 55  YGLYKQAVEGPADSKKGPYWFETVARKKFNSWLANSQMSRSRAMEAYCELMAQLDTS 111


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 240 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 335
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +3

Query: 174 YAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIE 320
           Y+ +KQAT G  D    P    ++ + K++AW++L    + +A+  Y+E
Sbjct: 36  YSLYKQATSGKCDTIQ-PYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83


>U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical
           protein T05B11.4 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 264 RQIWLYPSRLEDQGYWLDRQLQLW-PV*NGHTS*GVG 157
           RQ W+  + L    Y  DRQL  W P    H+S G+G
Sbjct: 338 RQQWIMKTELMPPKYEGDRQLDKWMPTHRWHSSSGIG 374


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,772,940
Number of Sequences: 27780
Number of extensions: 305634
Number of successful extensions: 668
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)