BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G05
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0187 - 1492732-1492935,1493708-1493765,1494871-1494947,149... 36 0.025
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 33 0.23
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 32 0.40
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 32 0.53
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 1.2
11_01_0791 + 6627961-6630702 30 1.6
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 30 2.2
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 30 2.2
03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413... 30 2.2
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 30 2.2
11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483... 29 3.8
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 3.8
03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574 29 5.0
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 28 6.6
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 28 6.6
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 28 6.6
12_01_0610 + 5030130-5030247,5030957-5033193 28 8.7
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 28 8.7
08_02_0316 + 15690452-15690555,15690871-15690965,15693707-156937... 28 8.7
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 8.7
02_04_0209 - 20942021-20942181,20942354-20942420,20942651-209427... 28 8.7
>03_01_0187 -
1492732-1492935,1493708-1493765,1494871-1494947,
1495086-1495160,1495259-1495315,1495451-1495567,
1495805-1495915,1496029-1496151,1496304-1496393,
1496480-1496605,1496687-1496740,1496975-1497055,
1497147-1497254,1497443-1497514,1497626-1497688,
1498417-1498629
Length = 542
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +3
Query: 498 LATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEF 677
+AT+ FE+ LH+ + + L+ N + +LK ++ K+ SD +AA K+ +
Sbjct: 402 VATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKSESDAKAAKKREYKNA 461
Query: 678 KTYEIQKEFEK 710
++Y+I + K
Sbjct: 462 ESYDIDSCWRK 472
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Frame = +3
Query: 240 APPVTPDKSE-----DSEIKDDLEEYMEYHRYLKEV--VQALESDPDFRERLEKADEED 395
A V PDKSE D E ++ EE +EY +E+ + +E D D E +E+ DEE+
Sbjct: 419 ANSVEPDKSEECLEFDDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEE 477
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 32.3 bits (70), Expect = 0.40
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Frame = +3
Query: 321 LKEVVQALESDPD---FRERLEKADEEDVKSGKIAE--QLDFVNHNVRTRLDEIKRRELE 485
LKE LE + +R +LEK D++ K E +L ++ +LDE + L
Sbjct: 1428 LKEAKDKLEKKVEELTWRVQLEKRMRTDLEEAKAQELSKLQSSMEALQAKLDETSAK-LV 1486
Query: 486 RLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKR 665
+ R +A E + V +E +D A E+E+LK + + +KKR
Sbjct: 1487 KEREVARAIEEAPPVVQQTEVLVQDTEKVDSLTA---EVEELKTSLQSEKQRADDLEKKR 1543
Query: 666 REEFKTYEIQKEFEKHXKME 725
EE + E EK KME
Sbjct: 1544 SEEQQANE-----EKQKKME 1558
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 31.9 bits (69), Expect = 0.53
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Frame = +3
Query: 375 EKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 554
EK +E ++ +IAE+ + ++ D IK+ E + LR E + H
Sbjct: 527 EKKEELQKEAIRIAEERRAITEYLKNESDIIKQ-EKDNLRVQFKSNSETLSREHKEFMSK 585
Query: 555 PSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTY--EIQKEFEKHXKME 725
EH + E +DLK+ I +L + K R+ E +Y E ++EFE+ E
Sbjct: 586 MQQEHASWLSKIQQERQDLKRDIDIQRVELLNSAKARQMEIDSYLREREEEFEQKKAKE 644
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/126 (23%), Positives = 55/126 (43%)
Frame = +3
Query: 273 SEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRT 452
S +K EEY H++ ++++ LE+ + +D +D G ++ N+N++T
Sbjct: 116 SLVKGFHEEYEYLHKHYQQLIGKLENVGHSSSDSDSSDSDD--EGDSSD-----NNNLKT 168
Query: 453 RLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKT 632
++++ E + L + L + K+ +T EI DLK L+ K
Sbjct: 169 KVEDALSEENGWKQKLVEDREAKEESLEAEIEKLK-----QNTEEQAKEISDLKHLLDKA 223
Query: 633 TSDLEA 650
D EA
Sbjct: 224 IKDKEA 229
>11_01_0791 + 6627961-6630702
Length = 913
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 192 LLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALES 350
+ V+ C I+ L P+ P + E SE K+DL M H KE+ + E+
Sbjct: 226 ITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTEN 278
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +3
Query: 249 VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLD 428
+ P+ D EI + EY R K+ + S+ D RLE+ D+E+ + ++ D
Sbjct: 537 IDPNFDSDDEIMGEAVYDEEYLRTRKQQKTSSASEEDEEFRLEEDDDEEEEEYSLSTSED 596
Query: 429 FVNHNVRTRLDEIKRR 476
R +L RR
Sbjct: 597 LEEPQQRKKLQTRGRR 612
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 439 WLTKSSCSAIFPDLTSSSSAFSNRSLKSGSLSNAC 335
WLT C+ +FPD +S S S GS+ NAC
Sbjct: 1373 WLTHCHCT-LFPDGNNSDSLLSALLKIRGSMDNAC 1406
>03_01_0555 +
4132630-4132923,4133514-4133771,4134125-4134249,
4134789-4134990,4135172-4135297,4135404-4135660,
4135968-4136075,4136142-4136310,4136378-4136543,
4136967-4136998,4137256-4137579,4137683-4137757,
4138093-4138162,4138228-4138385,4138872-4139021
Length = 837
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
D + + D L++ E + + + D D R LE+ADE+D +G E V
Sbjct: 85 DHAWSFRLSDALKQLREVPGLAERMAALMCVDLDERTELEEADEQDNGNGGSLESALEVV 144
Query: 438 HNVRTRLDE 464
RTR+ E
Sbjct: 145 EKERTRIQE 153
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/139 (21%), Positives = 64/139 (46%)
Frame = +3
Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
DK E + + + + +E+ + +E + L D E L +++ K E L
Sbjct: 820 DKVERQQAEMETQR-LEFKQKQQEAQRKLSEAQDDSEVLRRSNS---KLQSTVESLIEEC 875
Query: 438 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKK 617
+++ ++ E+KR++LE HL ++ EL N N+ + E L+ + + +D+
Sbjct: 876 SSLQNQIAELKRQKLELHGHLTQQEQELDNSKKRNLDFCKTVEFLE-AKLSSLQ-KDISS 933
Query: 618 LIMKTTSDLEAADKKRREE 674
S+LE+ ++ E+
Sbjct: 934 KEQSLLSELESIFQEHTEQ 952
>11_04_0450 -
17847676-17847841,17848024-17848131,17848223-17848377,
17848471-17848560,17848650-17848748,17848862-17848928,
17849028-17849124,17849357-17849492,17849579-17849634,
17849718-17849801,17849909-17850125
Length = 424
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
D S+ SE++ LEEY+ L LES +FR R DEE S E L ++
Sbjct: 76 DVSDVSELQHALEEYLPVVLGLTMKESRLESSVEFRWRTLDDDEECCLSSAWYEVLSVIH 135
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 29.1 bits (62), Expect = 3.8
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +3
Query: 267 EDSE--IKDDLEEYMEYHRYLKEVVQALESDPDF-RERLEKADEEDVKSGKIAEQLDFVN 437
EDS + DLEE + L + A++++ +F + LEK + + + A Q +FV
Sbjct: 1525 EDSSEMLISDLEESHKRISELSAEIVAVKAEKEFFSQSLEKLRFDFLGLSEKAVQDEFVR 1584
Query: 438 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 554
N+R L E++ + E+ T++ +L +D+ + + K+
Sbjct: 1585 DNLRKDLAELQEKLAEK-----TEESKLYHDMEMEIKKL 1618
>03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574
Length = 602
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +3
Query: 270 DSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 440
D EI+D D++ + ++L++ + SD F+E K +EE+ K E+ +
Sbjct: 247 DKEIEDVNADIKAHEVCLQHLEQESYNVLSDAGFQEEKLKIEEEEKKLNAAIEEAEKQYS 306
Query: 441 NVRTRLD--EIKRRELERLRHLATKQF 515
+ + + EIK +E E L +F
Sbjct: 307 EISSEMKDLEIKSKEFEELEERYWHEF 333
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 321 LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVR--TRLDEIKRRELERLR 494
L E E + RE LEK EE+ K + A+ + + + R E++R + ER
Sbjct: 108 LVEAQHKAERERKEREELEKKLEEERKKAEEAQMKEAMEQQQKELERYQELERLQKEREE 167
Query: 495 HLATKQFE 518
+ KQ E
Sbjct: 168 AMKRKQME 175
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 246 PVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDP-DFRERLEKADEED 395
P P +S++ ++DLE+Y Y+ + SD D E LE D ED
Sbjct: 494 PPPPTESDEERFREDLEQYYN-DGYVSTPCPSPPSDLFDCEENLEDGDVED 543
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 357 DFRERLEKAD-EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLA 503
DFRER+ K + ++D K G + ++ ++ + D K+R +ER R +A
Sbjct: 402 DFRERILKENLKDDRKKGSLT-RMGSISSEQADKGDPTKKRRVERSRKMA 450
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3
Query: 213 MIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 338
++V HCS +PP PD EY Y RY K VVQ
Sbjct: 281 VLVMTHCSSSPPEGPDGYP--------LEYDSYARYCKNVVQ 314
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 234 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 398
S PP T KS D+E K + EE E L+E+ D D E E+ ++E++
Sbjct: 104 SQPPPRTESKSADAEEKSEEEEDGEGDEELEEL-----DDVDDEEESEEEEKEEL 153
>08_02_0316 +
15690452-15690555,15690871-15690965,15693707-15693783,
15693854-15693908,15695158-15695227,15695388-15695457,
15696047-15696340
Length = 254
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 252 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 338
TPD E E+K+ L ME R L E V+
Sbjct: 129 TPDLKESQELKEALRAQMEVQRKLHEQVE 157
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 27.9 bits (59), Expect = 8.7
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +3
Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALES------DPDFRERLEKADEEDVKSGKIAE 419
D ED+E + + YHR+ + +Q LE+ PD ++R E + + A
Sbjct: 254 DDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLD----AR 309
Query: 420 QLDFVNHNVRTRLDEIKRRELERLRHLATKQ 512
Q+ F N RT++ + +LER + KQ
Sbjct: 310 QVKFWFQNRRTQM----KTQLERHENALLKQ 336
>02_04_0209 -
20942021-20942181,20942354-20942420,20942651-20942743,
20943026-20943119,20943690-20943762,20943865-20943973,
20944564-20944663,20945389-20945487,20945571-20945641,
20946067-20946144,20946317-20946403,20946538-20946636
Length = 376
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 80 GQQNSTYSKIIQSISNENCHYLHVDLVVLAKLTHQYEALS--YNRLYD 217
G+ + Y+K I+ I +E+ Y+H D + H +E LS YN++ D
Sbjct: 93 GRLHDRYAKSIEPILSEDIRYVHFDFHRICGHIH-FERLSQLYNQIED 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,734
Number of Sequences: 37544
Number of extensions: 277183
Number of successful extensions: 936
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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