SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G05
         (725 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0187 - 1492732-1492935,1493708-1493765,1494871-1494947,149...    36   0.025
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181...    33   0.23 
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472...    32   0.40 
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235...    32   0.53 
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    31   1.2  
11_01_0791 + 6627961-6630702                                           30   1.6  
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510...    30   2.2  
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701...    30   2.2  
03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413...    30   2.2  
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42...    30   2.2  
11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483...    29   3.8  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    29   3.8  
03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574           29   5.0  
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754     28   6.6  
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348...    28   6.6  
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87...    28   6.6  
12_01_0610 + 5030130-5030247,5030957-5033193                           28   8.7  
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171...    28   8.7  
08_02_0316 + 15690452-15690555,15690871-15690965,15693707-156937...    28   8.7  
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092...    28   8.7  
02_04_0209 - 20942021-20942181,20942354-20942420,20942651-209427...    28   8.7  

>03_01_0187 -
           1492732-1492935,1493708-1493765,1494871-1494947,
           1495086-1495160,1495259-1495315,1495451-1495567,
           1495805-1495915,1496029-1496151,1496304-1496393,
           1496480-1496605,1496687-1496740,1496975-1497055,
           1497147-1497254,1497443-1497514,1497626-1497688,
           1498417-1498629
          Length = 542

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 19/71 (26%), Positives = 38/71 (53%)
 Frame = +3

Query: 498 LATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEF 677
           +AT+ FE+   LH+   +    + L+  N +     +LK ++ K+ SD +AA K+  +  
Sbjct: 402 VATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKSESDAKAAKKREYKNA 461

Query: 678 KTYEIQKEFEK 710
           ++Y+I   + K
Sbjct: 462 ESYDIDSCWRK 472


>11_01_0236 +
           1811822-1812971,1814930-1814979,1815676-1816116,
           1816199-1816309,1816934-1817074,1817153-1817323,
           1817421-1817625,1817714-1817886,1817997-1818079,
           1818487-1818626,1818806-1818891,1818957-1819142,
           1819172-1819365,1820387-1820736,1821153-1821235
          Length = 1187

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
 Frame = +3

Query: 240 APPVTPDKSE-----DSEIKDDLEEYMEYHRYLKEV--VQALESDPDFRERLEKADEED 395
           A  V PDKSE     D E ++  EE +EY    +E+   + +E D D  E +E+ DEE+
Sbjct: 419 ANSVEPDKSEECLEFDDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEE 477


>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
            16547322-16547469,16550080-16550148,16550348-16550509,
            16550625-16550785,16551240-16551324,16552068-16552144,
            16552234-16552441,16555844-16555921,16556463-16556591,
            16556665-16556808,16556893-16557038,16557137-16557293,
            16557391-16557449,16557582-16557741,16557849-16557998,
            16558093-16558229,16558325-16558471,16558556-16558657,
            16558742-16558799,16558895-16558996,16559729-16559766,
            16559868-16559994,16560075-16560245,16560334-16560465,
            16560577-16560686,16560866-16560926,16561031-16561208,
            16561293-16561498,16561590-16561709,16561903-16562001,
            16562152-16562370,16562701-16562840,16563175-16563286,
            16563375-16563425,16563509-16563589,16563683-16563853,
            16563934-16564089,16564174-16564380,16565145-16565215,
            16565315-16565414,16565783-16565839,16566156-16566212,
            16566308-16566388,16566467-16566606,16566641-16566764
          Length = 2041

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
 Frame = +3

Query: 321  LKEVVQALESDPD---FRERLEKADEEDVKSGKIAE--QLDFVNHNVRTRLDEIKRRELE 485
            LKE    LE   +   +R +LEK    D++  K  E  +L      ++ +LDE   + L 
Sbjct: 1428 LKEAKDKLEKKVEELTWRVQLEKRMRTDLEEAKAQELSKLQSSMEALQAKLDETSAK-LV 1486

Query: 486  RLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKR 665
            + R +A    E    +      V  +E +D   A   E+E+LK  +       +  +KKR
Sbjct: 1487 KEREVARAIEEAPPVVQQTEVLVQDTEKVDSLTA---EVEELKTSLQSEKQRADDLEKKR 1543

Query: 666  REEFKTYEIQKEFEKHXKME 725
             EE +  E     EK  KME
Sbjct: 1544 SEEQQANE-----EKQKKME 1558


>01_06_0836 -
           32321431-32321556,32321656-32321872,32321975-32323590,
           32323670-32323753,32323834-32324104,32324294-32324547,
           32324709-32324918,32325839-32326024
          Length = 987

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
 Frame = +3

Query: 375 EKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 554
           EK +E   ++ +IAE+   +   ++   D IK+ E + LR       E  +  H      
Sbjct: 527 EKKEELQKEAIRIAEERRAITEYLKNESDIIKQ-EKDNLRVQFKSNSETLSREHKEFMSK 585

Query: 555 PSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTY--EIQKEFEKHXKME 725
              EH    +    E +DLK+ I     +L  + K R+ E  +Y  E ++EFE+    E
Sbjct: 586 MQQEHASWLSKIQQERQDLKRDIDIQRVELLNSAKARQMEIDSYLREREEEFEQKKAKE 644


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 29/126 (23%), Positives = 55/126 (43%)
 Frame = +3

Query: 273 SEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRT 452
           S +K   EEY   H++ ++++  LE+        + +D +D   G  ++     N+N++T
Sbjct: 116 SLVKGFHEEYEYLHKHYQQLIGKLENVGHSSSDSDSSDSDD--EGDSSD-----NNNLKT 168

Query: 453 RLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKT 632
           ++++    E    + L   +      L   + K+       +T     EI DLK L+ K 
Sbjct: 169 KVEDALSEENGWKQKLVEDREAKEESLEAEIEKLK-----QNTEEQAKEISDLKHLLDKA 223

Query: 633 TSDLEA 650
             D EA
Sbjct: 224 IKDKEA 229


>11_01_0791 + 6627961-6630702
          Length = 913

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 192 LLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALES 350
           + V+  C I+ L      P+ P + E SE K+DL   M  H   KE+ +  E+
Sbjct: 226 ITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTEN 278


>07_01_0678 -
           5103836-5104613,5104697-5104888,5104994-5105036,
           5105712-5105835,5105924-5106016,5106754-5106931,
           5107032-5107138,5108098-5108179,5108277-5108314,
           5108409-5108495,5109025-5109135,5109282-5109773
          Length = 774

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = +3

Query: 249 VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLD 428
           + P+   D EI  +     EY R  K+   +  S+ D   RLE+ D+E+ +   ++   D
Sbjct: 537 IDPNFDSDDEIMGEAVYDEEYLRTRKQQKTSSASEEDEEFRLEEDDDEEEEEYSLSTSED 596

Query: 429 FVNHNVRTRLDEIKRR 476
                 R +L    RR
Sbjct: 597 LEEPQQRKKLQTRGRR 612


>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
            30670186-30670281,30670679-30670828,30670956-30671100,
            30671178-30671251,30671325-30671445,30671697-30671821,
            30671898-30672047,30672249-30672324,30672496-30672557,
            30672597-30672839,30673354-30673683,30673776-30673932,
            30674008-30674139,30674219-30674277,30674734-30674798,
            30674878-30675094,30675413-30675499,30675655-30675750,
            30675938-30676003,30676096-30676287,30676380-30676532,
            30676812-30677052,30677322-30677515,30678212-30678348,
            30678474-30678480,30678708-30678830,30679370-30679427,
            30680018-30680090,30680493-30681765
          Length = 1714

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 439  WLTKSSCSAIFPDLTSSSSAFSNRSLKSGSLSNAC 335
            WLT   C+ +FPD  +S S  S      GS+ NAC
Sbjct: 1373 WLTHCHCT-LFPDGNNSDSLLSALLKIRGSMDNAC 1406


>03_01_0555 +
           4132630-4132923,4133514-4133771,4134125-4134249,
           4134789-4134990,4135172-4135297,4135404-4135660,
           4135968-4136075,4136142-4136310,4136378-4136543,
           4136967-4136998,4137256-4137579,4137683-4137757,
           4138093-4138162,4138228-4138385,4138872-4139021
          Length = 837

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +3

Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
           D +    + D L++  E     + +   +  D D R  LE+ADE+D  +G   E    V 
Sbjct: 85  DHAWSFRLSDALKQLREVPGLAERMAALMCVDLDERTELEEADEQDNGNGGSLESALEVV 144

Query: 438 HNVRTRLDE 464
              RTR+ E
Sbjct: 145 EKERTRIQE 153


>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
            420334-420502,421115-424273,424367-424485,424915-425116
          Length = 1363

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 30/139 (21%), Positives = 64/139 (46%)
 Frame = +3

Query: 258  DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
            DK E  + + + +  +E+ +  +E  + L    D  E L +++    K     E L    
Sbjct: 820  DKVERQQAEMETQR-LEFKQKQQEAQRKLSEAQDDSEVLRRSNS---KLQSTVESLIEEC 875

Query: 438  HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKK 617
             +++ ++ E+KR++LE   HL  ++ EL N    N+    + E L+     + + +D+  
Sbjct: 876  SSLQNQIAELKRQKLELHGHLTQQEQELDNSKKRNLDFCKTVEFLE-AKLSSLQ-KDISS 933

Query: 618  LIMKTTSDLEAADKKRREE 674
                  S+LE+  ++  E+
Sbjct: 934  KEQSLLSELESIFQEHTEQ 952


>11_04_0450 -
           17847676-17847841,17848024-17848131,17848223-17848377,
           17848471-17848560,17848650-17848748,17848862-17848928,
           17849028-17849124,17849357-17849492,17849579-17849634,
           17849718-17849801,17849909-17850125
          Length = 424

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +3

Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
           D S+ SE++  LEEY+     L      LES  +FR R    DEE   S    E L  ++
Sbjct: 76  DVSDVSELQHALEEYLPVVLGLTMKESRLESSVEFRWRTLDDDEECCLSSAWYEVLSVIH 135


>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
            2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = +3

Query: 267  EDSE--IKDDLEEYMEYHRYLKEVVQALESDPDF-RERLEKADEEDVKSGKIAEQLDFVN 437
            EDS   +  DLEE  +    L   + A++++ +F  + LEK   + +   + A Q +FV 
Sbjct: 1525 EDSSEMLISDLEESHKRISELSAEIVAVKAEKEFFSQSLEKLRFDFLGLSEKAVQDEFVR 1584

Query: 438  HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 554
             N+R  L E++ +  E+     T++ +L +D+ + + K+
Sbjct: 1585 DNLRKDLAELQEKLAEK-----TEESKLYHDMEMEIKKL 1618


>03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574
          Length = 602

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +3

Query: 270 DSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 440
           D EI+D   D++ +    ++L++    + SD  F+E   K +EE+ K     E+ +    
Sbjct: 247 DKEIEDVNADIKAHEVCLQHLEQESYNVLSDAGFQEEKLKIEEEEKKLNAAIEEAEKQYS 306

Query: 441 NVRTRLD--EIKRRELERLRHLATKQF 515
            + + +   EIK +E E L      +F
Sbjct: 307 EISSEMKDLEIKSKEFEELEERYWHEF 333


>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
          Length = 203

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +3

Query: 321 LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVR--TRLDEIKRRELERLR 494
           L E     E +   RE LEK  EE+ K  + A+  + +    +   R  E++R + ER  
Sbjct: 108 LVEAQHKAERERKEREELEKKLEEERKKAEEAQMKEAMEQQQKELERYQELERLQKEREE 167

Query: 495 HLATKQFE 518
            +  KQ E
Sbjct: 168 AMKRKQME 175


>06_02_0345 +
           14833838-14833997,14834095-14834552,14834633-14834870,
           14834974-14835431,14836554-14836955
          Length = 571

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 246 PVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDP-DFRERLEKADEED 395
           P  P +S++   ++DLE+Y     Y+     +  SD  D  E LE  D ED
Sbjct: 494 PPPPTESDEERFREDLEQYYN-DGYVSTPCPSPPSDLFDCEENLEDGDVED 543


>06_01_0111 +
           870781-871017,871194-871240,871681-871947,872196-872848,
           872997-873043,873124-873169,873371-873416,873592-873720,
           873822-873942
          Length = 530

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 357 DFRERLEKAD-EEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLA 503
           DFRER+ K + ++D K G +  ++  ++     + D  K+R +ER R +A
Sbjct: 402 DFRERILKENLKDDRKKGSLT-RMGSISSEQADKGDPTKKRRVERSRKMA 450


>12_01_0610 + 5030130-5030247,5030957-5033193
          Length = 784

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +3

Query: 213 MIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 338
           ++V  HCS +PP  PD            EY  Y RY K VVQ
Sbjct: 281 VLVMTHCSSSPPEGPDGYP--------LEYDSYARYCKNVVQ 314


>11_01_0219 -
           1710206-1710246,1710479-1710620,1710699-1710752,
           1710838-1710909,1711631-1711699,1711807-1711848,
           1711946-1712014,1712130-1712267,1712390-1712500,
           1712576-1712726,1713720-1713775,1714076-1714753
          Length = 540

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 234 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 398
           S  PP T  KS D+E K + EE  E    L+E+      D D  E  E+ ++E++
Sbjct: 104 SQPPPRTESKSADAEEKSEEEEDGEGDEELEEL-----DDVDDEEESEEEEKEEL 153


>08_02_0316 +
           15690452-15690555,15690871-15690965,15693707-15693783,
           15693854-15693908,15695158-15695227,15695388-15695457,
           15696047-15696340
          Length = 254

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 252 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 338
           TPD  E  E+K+ L   ME  R L E V+
Sbjct: 129 TPDLKESQELKEALRAQMEVQRKLHEQVE 157


>02_05_0286 -
           27506925-27507278,27508439-27508812,27509041-27509218,
           27510878-27511105,27511215-27511316,27511415-27512131,
           27512270-27512387,27512500-27512744,27512854-27513054,
           27513920-27514324
          Length = 973

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
 Frame = +3

Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALES------DPDFRERLEKADEEDVKSGKIAE 419
           D  ED+E  +  +    YHR+  + +Q LE+       PD ++R E +    +     A 
Sbjct: 254 DDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLD----AR 309

Query: 420 QLDFVNHNVRTRLDEIKRRELERLRHLATKQ 512
           Q+ F   N RT++    + +LER  +   KQ
Sbjct: 310 QVKFWFQNRRTQM----KTQLERHENALLKQ 336


>02_04_0209 -
           20942021-20942181,20942354-20942420,20942651-20942743,
           20943026-20943119,20943690-20943762,20943865-20943973,
           20944564-20944663,20945389-20945487,20945571-20945641,
           20946067-20946144,20946317-20946403,20946538-20946636
          Length = 376

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 80  GQQNSTYSKIIQSISNENCHYLHVDLVVLAKLTHQYEALS--YNRLYD 217
           G+ +  Y+K I+ I +E+  Y+H D   +    H +E LS  YN++ D
Sbjct: 93  GRLHDRYAKSIEPILSEDIRYVHFDFHRICGHIH-FERLSQLYNQIED 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,734
Number of Sequences: 37544
Number of extensions: 277183
Number of successful extensions: 936
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -