Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G04
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 86 4e-18
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 50 3e-07
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 47 2e-06
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 44 2e-05
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.035
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 30 0.33
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 0.43
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 29 0.43
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 2.3
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 4.0
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 26 5.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.3
SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Ma... 25 7.0
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 25 7.0
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 7.0
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 9.3
SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual 25 9.3
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 86.2 bits (204), Expect = 4e-18
Identities = 40/117 (34%), Positives = 70/117 (59%)
Frame = +2
Query: 185 ILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRL 364
++R +GQ L+++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAF++
Sbjct: 37 VMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNE---EEVREAFKV 93
Query: 365 YDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMMTGE 535
+DK+GNGYI L + I+E DTDG G ++++EF +++ +
Sbjct: 94 FDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISSK 150
Score = 50.0 bits (114), Expect = 3e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 341 ELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFME 520
E REAF L+D++ +G I ++ L + I E+D DG+GT+DF EF+
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLT 72
Query: 521 MM 526
MM
Sbjct: 73 MM 74
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LPPEQIAVLRKAFDGFDHNRSGSI 162
L EQIA R+AF FD ++ G+I
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNI 29
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 50.0 bits (114), Expect = 3e-07
Identities = 30/116 (25%), Positives = 53/116 (45%)
Frame = +2
Query: 188 LRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLY 367
+R +G K + +++ + D G L+ +FV + + IVE D +E++ AF L+
Sbjct: 63 MRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDP---LEEIKRAFELF 119
Query: 368 DKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMMTGE 535
D + G I +LR + I+E D D G ++ EF+ +M E
Sbjct: 120 DDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIMMDE 175
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +2
Query: 317 EDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGT 496
E E ++++ EAF+L+D + + I LR +++ D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 497 VDFDEFMEMMT 529
+ ++F+ +MT
Sbjct: 90 LQMEDFVRVMT 100
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 47.2 bits (107), Expect = 2e-06
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Frame = +2
Query: 221 ILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTS 400
+ L VD D G ++F EF+ + F V + E ++L+ AF++YD + +GYI
Sbjct: 57 LASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNG 113
Query: 401 SL-----REIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMMTG 532
L + I E+D D G + F+EF ++++G
Sbjct: 114 ELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIVSG 162
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 43.6 bits (98), Expect = 2e-05
Identities = 28/119 (23%), Positives = 55/119 (46%)
Frame = +2
Query: 164 PXDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKE 343
P V +LR +G L +L E+ ++ +F++ + + E ++E +E
Sbjct: 27 PTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSFVSNKLRETESE---EE 79
Query: 344 LREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFME 520
+AFR++DK+ +GYI T+ + +QE D SG+ D+ +F++
Sbjct: 80 YIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138
Score = 29.1 bits (62), Expect = 0.57
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 341 ELREAFRLYDKEGNGYIPTSSLREI 415
E++EAF LYD + +G IPTS + +
Sbjct: 10 EMKEAFVLYDIDKDGLIPTSHVGSV 34
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 33.1 bits (72), Expect = 0.035
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +2
Query: 227 EELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSL 406
E + DADK+G ++F EF+ + V E + +L AF+LYD + NG I +
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 407 REI 415
I
Sbjct: 122 LRI 124
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 218 KILEELIEEVDADKSGRLEFPEF 286
+ LEE ++ DAD SG+L F EF
Sbjct: 333 EFLEETFQKADADHSGKLSFEEF 355
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 29.5 bits (63), Expect = 0.43
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -1
Query: 514 ELVEVDGAASVSV-DLLDEAIEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFF 338
EL V A S DL D AI ++Q+L F +DL + VT+ + +P ++
Sbjct: 1246 ELTNVVNVALTSTGDLDDSAIVSKLNQILSDFRDDLLEHNVRRVTIVGGRINKSAYPSYY 1305
Query: 337 LHGLS 323
+ +S
Sbjct: 1306 TYRVS 1310
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 29.5 bits (63), Expect = 0.43
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +2
Query: 347 REAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGTVDFDEFMEMM 526
++AF L+D+ G G IP +S+ ++ I EI++ VD ++F++++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDL----LRACGQNPTLAEITEIESTLPAEVDMEQFLQVL 64
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 338 KELREAFRLYDKEGNGYI 391
+EL+EAF L DK+G+G I
Sbjct: 48 QELKEAFALLDKDGDGNI 65
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 108 DLFWGQLIGPVFGVQEPWLMSLVNTVRRTTRL 13
DL G LI + G++EP L +VN T+L
Sbjct: 1022 DLIDGSLIESILGLREPILNEIVNGGHEGTKL 1053
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 332 MQKELREAFRLYDKEGNGYIPTSSLR 409
M +E EAF L+D GYI LR
Sbjct: 10 MDEEAEEAFDLFDVTHKGYIDFEDLR 35
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 408 ARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 515
A ++G+ TSS T + SS S T +A +STSS
Sbjct: 968 ASATGSSTSSIATASVSGSSTSSVATASATDSSTSS 1003
Score = 25.4 bits (53), Expect = 7.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 402 ACARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 515
A A +G+ TSS T + SS S T +A +STSS
Sbjct: 1005 AAASVTGSSTSSVATASVTDSSTSSVATASATDSSTSS 1042
>SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 535
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 209 MAAPSFSGYQPRSXQGILPERL 144
+ PSFS Y+ +S Q +LP+ L
Sbjct: 447 LTGPSFSRYELQSAQSVLPKDL 468
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 224 LEELIEEVDADKSGRLEFPEFV 289
+ E I EV+ D SGR+E +FV
Sbjct: 56 VREAIREVNVDSSGRVEPEDFV 77
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.4 bits (53), Expect = 7.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 61 TMVDVTS*HCETHNTTHRP 5
T++D+ S HCE N RP
Sbjct: 1099 TLIDIGSIHCEISNFARRP 1117
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 278 PEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEG 379
PEF AA+ +VEED E + EA + D+EG
Sbjct: 38 PEFSDEAAEALVEEDIEDLD---GEALDVEDEEG 68
>SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 399 RACARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSSW 518
R C S +W SS +T + S+R L S + W
Sbjct: 59 RLCKLPSKSWVSSTVTNEKLRESRRLALQAYVQCLSETPW 98
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,143,416
Number of Sequences: 5004
Number of extensions: 37617
Number of successful extensions: 154
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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