Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G03
         (860 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y075 Cluster: Putative uncharacterized protein; n=1; ...    40   0.11 
UniRef50_Q1FKX6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q048C3 Cluster: Predicted Zn-dependent protease; n=2; L...    33   9.3  
UniRef50_A0DVZ9 Cluster: Chromosome undetermined scaffold_66, wh...    33   9.3  

>UniRef50_Q4Y075 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 55

 Score = 39.5 bits (88), Expect = 0.11
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 543 SPTMFLRILFFNNEY*ISLNLNSNICFVFSA-CPNFYEFLKVQYFFTIFTKNK 698
           S T ++ I +F N+   +L + S+  FV    CP+ Y +L + +F  I+TK K
Sbjct: 2   SSTFYITIFYFVNKKNKNLQIKSSFMFVLQIICPHIYAYLCIYFFLLIYTKKK 54


>UniRef50_Q1FKX6 Cluster: Putative uncharacterized protein; n=1;
           Clostridium phytofermentans ISDg|Rep: Putative
           uncharacterized protein - Clostridium phytofermentans
           ISDg
          Length = 648

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +2

Query: 11  IYFKSSFNYYLYNS----RKPRKMPSNISTI---KMQI-HTEIFSMRAQSVIFTHILYL* 166
           +Y K  FNYY Y +    +K     S I  +     +I   E F++   S++F HIL   
Sbjct: 68  LYKKKDFNYYKYLNDLACKKKYVFKSMIEEVFGNNFKITEVEKFTLNDYSIVFKHILKDK 127

Query: 167 *SRYTLNFDTYYFQKLLFNYT 229
            S+  L+FD  Y Q  LFN T
Sbjct: 128 NSK--LDFDLLYLQMKLFNIT 146


>UniRef50_Q048C3 Cluster: Predicted Zn-dependent protease; n=2;
           Lactobacillus delbrueckii subsp. bulgaricus|Rep:
           Predicted Zn-dependent protease - Lactobacillus
           delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
          Length = 220

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 11/29 (37%), Positives = 23/29 (79%)
 Frame = +2

Query: 191 DTYYFQKLLFNYTCFKILHTIKYEIGYSI 277
           +TYY +   +NYT  +I++T+++E+G++I
Sbjct: 156 NTYYLENDYYNYTQARIVNTVEHELGHAI 184


>UniRef50_A0DVZ9 Cluster: Chromosome undetermined scaffold_66, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_66,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 642

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = +3

Query: 36  IISIIRENRGKCLRTSLPLKCKYILKY----SQCVPSQSSLHIFYI---YNNHVTHLISI 194
           +I +I++N+ +  +  + LK K   K     SQ V  Q  L + Y+    NN +TH IS+
Sbjct: 321 VIILIKQNKKEAQKQQIKLKLKIANKLIDQASQTVQQQLRLSLIYLKQLLNNQITHQISL 380

Query: 195 H 197
           H
Sbjct: 381 H 381


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,938,090
Number of Sequences: 1657284
Number of extensions: 11940153
Number of successful extensions: 26969
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26955
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)