Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G03
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 1.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 1.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 1.2
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 2.7
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 23 2.7
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 23 2.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.6
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 97 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 137
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 330 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 370
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 421 NYDQINKHKKTTCLFNLNFVSC*LNYKLYSNVYFKNFNKKNLPP 552
NY+ NKH +N+N++ + VY NF + + P
Sbjct: 330 NYNNYNKHNYNKLYYNINYIE---QIPIPVPVYCGNFPPRPMGP 370
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/29 (27%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 221 NYTCFKILHTIKYEIGYSIRY-YLRAPLV 304
N+TC +I+ ++ +GY + + Y+ + L+
Sbjct: 199 NFTCIQIVFNLRRRLGYHLFHTYIPSALI 227
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 63 GKCLRTSLPLKCKYILKYSQCVPSQSSLHIFYI 161
GKCL TS C I ++CV +S+ ++++
Sbjct: 112 GKCLPTSGSDNCNKIYNLAKCV-QESAPDVWFV 143
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 63 GKCLRTSLPLKCKYILKYSQCVPSQSSLHIFYI 161
GKCL TS C I ++CV +S+ ++++
Sbjct: 112 GKCLPTSGSDNCNKIYNLAKCV-QESAPDVWFV 143
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.6
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +2
Query: 221 NYTCFKILHTIKYEIGY 271
N+TC +++ +K +GY
Sbjct: 230 NFTCLEVVFVLKRRLGY 246
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 493 NYKLYSNVYFKNFNKK 540
NY Y+N + N+NKK
Sbjct: 329 NYNNYNNNNYNNYNKK 344
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,426
Number of Sequences: 438
Number of extensions: 4447
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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