Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G01
(530 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm... 175 5e-43
UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole ge... 134 1e-30
UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -... 128 1e-28
UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 124 2e-27
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 119 5e-26
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 113 3e-24
UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative; ... 107 1e-22
UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein, pu... 107 2e-22
UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein NCU019... 100 2e-20
UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 smal... 97 3e-19
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 95 1e-18
UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm... 85 1e-15
UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein, pu... 78 1e-13
UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of s... 64 2e-09
UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, wh... 62 1e-08
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 60 4e-08
UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein... 59 5e-08
UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1; ... 57 2e-07
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 56 4e-07
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 54 2e-06
UniRef50_Q6BPZ1 Cluster: Debaryomyces hansenii chromosome E of s... 54 2e-06
UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm... 54 3e-06
UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6; Trypanoso... 53 5e-06
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 53 5e-06
UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6 sn... 52 8e-06
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 52 8e-06
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 51 2e-05
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 50 4e-05
UniRef50_UPI0000499B3D Cluster: hypothetical protein 7.t00009; n... 48 1e-04
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 48 1e-04
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 46 4e-04
UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces cere... 46 5e-04
UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putati... 45 0.001
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 43 0.004
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 43 0.005
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 42 0.007
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 42 0.009
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 42 0.009
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 42 0.012
UniRef50_Q4WP21 Cluster: Small nuclear ribonucleoprotein SmB, pu... 42 0.012
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 42 0.012
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 42 0.012
UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;... 41 0.016
UniRef50_UPI0000D55DF4 Cluster: PREDICTED: similar to CG31950-PA... 41 0.021
UniRef50_Q4UC24 Cluster: U6 snRNA-associated Sm-like potein, put... 41 0.021
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 41 0.021
UniRef50_Q4N5C8 Cluster: Small nuclear ribonucleoprotein B, puta... 40 0.036
UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G, puta... 40 0.036
UniRef50_Q3LW01 Cluster: MRNA splicing factor; n=1; Bigelowiella... 40 0.047
UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, wh... 40 0.047
UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole gen... 39 0.063
UniRef50_Q5CME6 Cluster: Similar to small nuclear ribonucleoprot... 39 0.083
UniRef50_A5K5F8 Cluster: U6 snRNA-associated Sm-like protein LSm... 39 0.083
UniRef50_Q8ILU8 Cluster: Ribonucleoprotein, putative; n=2; Plasm... 38 0.11
UniRef50_Q4YVP4 Cluster: Ribonucleoprotein, putative; n=3; Plasm... 38 0.11
UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1; Ae... 38 0.11
UniRef50_Q8IB34 Cluster: Ribonucleoprotein, putative; n=1; Plasm... 38 0.14
UniRef50_A5K5Q0 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.14
UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.14
UniRef50_Q9Y7M4 Cluster: Probable U6 snRNA-associated Sm-like pr... 38 0.14
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 38 0.19
UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog... 37 0.25
UniRef50_Q5K8A9 Cluster: RNA cap binding protein, putative; n=1;... 37 0.33
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 36 0.58
UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep... 36 0.58
UniRef50_P62310 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.58
UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep: S... 36 0.77
UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis ... 36 0.77
UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babe... 35 1.0
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 35 1.0
UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lambl... 35 1.3
UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces cere... 35 1.3
UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p... 34 1.8
UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1; Filobas... 34 1.8
UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 34 1.8
UniRef50_A5ZXY7 Cluster: Putative uncharacterized protein; n=2; ... 34 2.4
UniRef50_Q9FI15 Cluster: Similarity to small nuclear ribonucleop... 34 2.4
UniRef50_Q7REA8 Cluster: Putative uncharacterized protein PY0515... 34 2.4
UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q54F39 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q7S1Q3 Cluster: Putative uncharacterized protein NCU095... 33 3.1
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 33 3.1
UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 4.1
UniRef50_UPI0000513250 Cluster: PREDICTED: similar to CG31950-PA... 33 5.4
UniRef50_Q72NN3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A7BMV6 Cluster: Membrane protein; n=1; Beggiatoa sp. SS... 33 5.4
UniRef50_Q4D1G4 Cluster: Mucin-associated surface protein (MASP)... 33 5.4
UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Re... 33 5.4
UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 5.4
UniRef50_Q8F7N9 Cluster: Putative uncharacterized protein; n=3; ... 32 7.2
UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E hom... 32 7.2
UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza sat... 32 7.2
UniRef50_Q5CLJ8 Cluster: U6 snRNA-associated sm-like protein; n=... 32 7.2
UniRef50_A7APW1 Cluster: LSM domain containing protein; n=1; Bab... 32 7.2
UniRef50_Q6BIX4 Cluster: Similar to CA2640|IPF2930 Candida albic... 32 7.2
UniRef50_Q59ZT4 Cluster: Potential RNA processing complex subuni... 32 7.2
UniRef50_Q2UFI8 Cluster: Predicted protein; n=4; Trichocomaceae|... 32 7.2
UniRef50_A3LX11 Cluster: Predicted protein; n=3; Saccharomycetac... 32 7.2
UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep: Zgc:... 32 9.5
UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein, puta... 32 9.5
UniRef50_Q4UCJ8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_Q0UCR7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_A7EA47 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_A7D237 Cluster: Like-Sm ribonucleoprotein, core; n=1; H... 32 9.5
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 32 9.5
>UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=26; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm7 - Homo sapiens (Human)
Length = 103
Score = 175 bits (426), Expect = 5e-43
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +2
Query: 170 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPY 349
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RDPDD Y
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62
Query: 350 KLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 466
KL +DTR LGLVVCRGTSVVLICP DGMEAIPNPFI Q+
Sbjct: 63 KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101
>UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole
genome shotgun sequence; n=8; Eukaryota|Rep: Chromosome
chr13 scaffold_210, whole genome shotgun sequence -
Vitis vinifera (Grape)
Length = 113
Score = 134 bits (324), Expect = 1e-30
Identities = 58/95 (61%), Positives = 73/95 (76%)
Frame = +2
Query: 185 RKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDD 364
RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD EFLRDPDDP K D
Sbjct: 18 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQ 77
Query: 365 TRALGLVVCRGTSVVLICPMDGMEAIPNPFINQEG 469
TR LGL+VCRGT+V+L+ P DG + I NPFI +G
Sbjct: 78 TRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDG 112
>UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -
Homo sapiens (Human)
Length = 145
Score = 128 bits (308), Expect = 1e-28
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +2
Query: 251 GREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDG 430
GR +GILKG+DPLLNLVLD T E++RDPDD YKL +DTR LGLVVCRGTSVVLICP DG
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDG 131
Query: 431 MEAIPNPFINQE 466
MEAIPNPFI Q+
Sbjct: 132 MEAIPNPFIQQQ 143
>UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 100
Score = 124 bits (298), Expect = 2e-27
Identities = 53/94 (56%), Positives = 74/94 (78%)
Frame = +2
Query: 188 KESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDT 367
KE++LDL++++++ +RVK +GGRE G LKGYD LLNLVLD E LRD +D K+ D+T
Sbjct: 4 KETVLDLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAEDALKISDET 63
Query: 368 RALGLVVCRGTSVVLICPMDGMEAIPNPFINQEG 469
RALGL+VCRGTSV+++ +D ME I NPF+ ++G
Sbjct: 64 RALGLLVCRGTSVMVVSALDSMEEIANPFLAEDG 97
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 119 bits (286), Expect = 5e-26
Identities = 60/110 (54%), Positives = 76/110 (69%)
Frame = +2
Query: 137 EKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNT 316
+K G + E+ RKESILDLS+Y ++ I+ F GGR+ GILKG+D L+NLVLD+
Sbjct: 5 QKRPGPGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDV 64
Query: 317 TEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 466
E LR+P+D KL R LGLVV RGT++VLI PMDG E IPNPF+ E
Sbjct: 65 EEQLRNPEDG-KLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 113
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 113 bits (271), Expect = 3e-24
Identities = 57/110 (51%), Positives = 76/110 (69%)
Frame = +2
Query: 128 EGGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVL 307
+GG++ + Q +EK +KE+ILDL+KY+EK + VKF GGRE G LKGYD L+NLVL
Sbjct: 62 QGGQQQQQQQQQ-QQQEKPKKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVL 120
Query: 308 DNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFI 457
D+ E +RD + TR+LGL+V RGT +VLI P+DG E I NPF+
Sbjct: 121 DDVREVMRDDEGN----QTTRSLGLIVARGTLLVLISPVDGSEEIANPFL 166
>UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative;
n=2; Theileria|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 104
Score = 107 bits (258), Expect = 1e-22
Identities = 48/100 (48%), Positives = 72/100 (72%)
Frame = +2
Query: 158 VTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDP 337
+T +K R +S+++L+K+L K + VKF+GGRE G+L+G+D + NLVLD+T E+L+D
Sbjct: 1 MTAPSKSFRDVKSVINLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDS 60
Query: 338 DDPYKLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFI 457
D KL + R LGL+V RGTSV ++ P++G E I NPF+
Sbjct: 61 SDSSKLTGEKRNLGLLVARGTSVTVVYPVEGTEKIDNPFL 100
>UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein,
putative; n=4; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein, putative - Plasmodium berghei
Length = 108
Score = 107 bits (257), Expect = 2e-22
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
D+ K++ + IRVKF GGRE G L G+D + NLVLD T EF+RDP+D Y + + +R +GL
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIRDPNDSYVITEKSRNIGL 79
Query: 383 VVCRGTSVVLICPMDGMEAIPNPFINQE 466
+V RGTSV LI P++G + I NPFI++E
Sbjct: 80 IVARGTSVALITPVNGTQEISNPFISEE 107
>UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein
NCU01930.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01930.1 - Neurospora crassa
Length = 132
Score = 100 bits (239), Expect = 2e-20
Identities = 56/115 (48%), Positives = 69/115 (60%)
Frame = +2
Query: 122 SKEGGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNL 301
S GG + G GD E+ +KE+ILDL KY+++ I VKF GGRE G LKGYD L+NL
Sbjct: 30 SGAGGGQGGGGAQGGDRGERPKKENILDLKKYMDQRITVKFNGGREVTGTLKGYDALMNL 89
Query: 302 VLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 466
VLD+ E +R GLVV RGT +V+I P+DG E I NPF QE
Sbjct: 90 VLDDVQEAVR---------------GLVVARGTLLVVISPVDGSEVIANPFAQQE 129
>UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 126
Score = 97.9 bits (233), Expect = 1e-19
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 EKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKL 355
E ++E+I+DL+KY + IRVK GGR G+LKGYDPL+ LVLD T E+LRD +D +
Sbjct: 31 EGPKREAIVDLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLRDLEDSSII 90
Query: 356 L-DDTRALGLVVCRGTSVVLICPMDGMEAI 442
L D TR LGL V RGT ++ + P+DG E I
Sbjct: 91 LKDQTRDLGLTVIRGTVLLSLSPVDGSETI 120
>UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae); n=1; Macaca
mulatta|Rep: PREDICTED: LSM7 homolog, U6 small nuclear
RNA associated (S. cerevisiae) - Macaca mulatta
Length = 123
Score = 96.7 bits (230), Expect = 3e-19
Identities = 43/59 (72%), Positives = 54/59 (91%)
Frame = +2
Query: 170 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDP 346
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RD + P
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDLEAP 61
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 94.7 bits (225), Expect = 1e-18
Identities = 52/105 (49%), Positives = 71/105 (67%)
Frame = +2
Query: 116 MASKEGGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLL 295
M+S+ G ++G G ++KR ESIL+L+++++KSIRVKF GGREA GILKGYD L+
Sbjct: 1 MSSRGGRGGARGGGNQGGERKKR--ESILNLAQFVDKSIRVKFMGGREATGILKGYDQLM 58
Query: 296 NLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDG 430
NLV+D+ E D TR+LGLVV RG ++VL+ P DG
Sbjct: 59 NLVMDDVVEEYEDG-------RPTRSLGLVVLRGPNIVLVSPTDG 96
>UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=6; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 115
Score = 84.6 bits (200), Expect = 1e-15
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Frame = +2
Query: 176 EKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYK- 352
E ++E+ILDL+KY + IRVK GG+ G+LKGYD L+NLVLD+T E++ +PDD
Sbjct: 20 EGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNT 79
Query: 353 --LLDDTRALGLVVCRGTSVVLICPMDGMEAI 442
+ + R LGL V RGT +V + +G + +
Sbjct: 80 ELISKNARKLGLTVIRGTILVSLSSAEGSDVL 111
>UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein,
putative (Small nuclear ribonucleoprotein (LSM7),
putative); n=2; Pezizomycotina|Rep: U6 snrna-associated
sm-like protein, putative (Small nuclear
ribonucleoprotein (LSM7), putative) - Aspergillus
fumigatus (Sartorya fumigata)
Length = 134
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +2
Query: 131 GGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLD 310
GG G+Q +EK +KE+ILDLSKY++K ++VKF GGRE +G+LKGYD L+NLVLD
Sbjct: 33 GGGAGGGAQ---QQQEKPKKENILDLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLD 89
Query: 311 NTTEFLR 331
+ E +R
Sbjct: 90 DVKESMR 96
>UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/49 (55%), Positives = 39/49 (79%)
Frame = +2
Query: 185 RKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR 331
++E+ILDL+ Y +K IRVKF GGR+ G+LKG+D L+NLVL++ E +R
Sbjct: 28 KREAILDLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIR 76
>UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 83
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/90 (40%), Positives = 50/90 (55%)
Frame = +2
Query: 188 KESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDT 367
KESI+ L ++ K + ++F GGR+ G L +D LNLVLD E L
Sbjct: 6 KESIIKLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDEVRE-----------LPSQ 54
Query: 368 RALGLVVCRGTSVVLICPMDGMEAIPNPFI 457
R LGLV+CRG +++ +DGM I NP+I
Sbjct: 55 RILGLVICRG-ALINSFAIDGMVEIENPYI 83
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/75 (37%), Positives = 47/75 (62%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
++ KY++K + +K GGR GIL+G+DP +N+VLD+T E +D + +G+
Sbjct: 8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKD--------NTKNNIGM 59
Query: 383 VVCRGTSVVLICPMD 427
VV RG S+V++ +D
Sbjct: 60 VVIRGNSIVMVEALD 74
>UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 85
Score = 59.3 bits (137), Expect = 5e-08
Identities = 29/86 (33%), Positives = 52/86 (60%)
Frame = +2
Query: 188 KESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDT 367
K++ DL+K L+K + +K G R GIL+G+D +N+ L +T E + P + Y+
Sbjct: 5 KQADPDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVV-SPTEKYE----- 58
Query: 368 RALGLVVCRGTSVVLICPMDGMEAIP 445
+G+V+ RG S++L+ P++ M +P
Sbjct: 59 --IGMVIIRGNSILLMEPLESMAYVP 82
>UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 73
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +2
Query: 191 ESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFL 328
+SIL L+K+ K I+VK GGRE GIL+G+D + NLVLD T E++
Sbjct: 19 KSILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVEYM 64
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 56.4 bits (130), Expect = 4e-07
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L KY++K + +K G R +GIL+G+DP +N+V+D E+ +D + LG+
Sbjct: 8 ELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKD--------GGSVNLGM 59
Query: 383 VVCRGTSVVLICPMD 427
V RG SVV++ P +
Sbjct: 60 TVIRGNSVVIMEPKE 74
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
D K++EK +++ G R+ GIL+GYD +NLVLDNT E +D + +D +G+
Sbjct: 13 DFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEIKKD-----EQID----IGV 63
Query: 383 VVCRGTSV 406
VV RG S+
Sbjct: 64 VVIRGNSI 71
>UniRef50_Q6BPZ1 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 77
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +2
Query: 332 DPDDPYKLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 466
DP+D L D TR +G VV RG S++ I P+DG E I NPF NQE
Sbjct: 32 DPEDDNVLTDKTRDIGFVVVRGPSLLTISPVDGSEIIDNPFANQE 76
>UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Piroplasmida|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Theileria parva
Length = 94
Score = 53.6 bits (123), Expect = 3e-06
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L +++E S+ V GR G+LKG+D L NLVL N E + PD P + L+ LG+
Sbjct: 5 LEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELE----LGIY 60
Query: 386 VCRGTSVVLICPMD--------GMEAIP-NPFI 457
+ RG ++VL+ +D G+EA+P NP I
Sbjct: 61 LLRGDNIVLVGEVDVDVDRSMSGIEALPINPVI 93
>UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6;
Trypanosomatidae|Rep: Lsm7p protein, putative -
Leishmania major
Length = 91
Score = 52.8 bits (121), Expect = 5e-06
Identities = 38/92 (41%), Positives = 48/92 (52%)
Frame = +2
Query: 182 RRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLD 361
++KE IL L KYL++ I V G E G+LKG+D +NLVL + + RD
Sbjct: 10 KKKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHRD--------T 60
Query: 362 DTRALGLVVCRGTSVVLICPMDGMEAIPNPFI 457
R +G V RG V LI D IPNPFI
Sbjct: 61 HVRKIGACVVRGGPVNLILSGD-TTMIPNPFI 91
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8; n=1; Yarrowia
lipolytica|Rep: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8 - Yarrowia
lipolytica (Candida lipolytica)
Length = 97
Score = 52.0 bits (119), Expect = 8e-06
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
LS Y+ K + V GR GIL+GYD N++L NT E + PD+P +++D LGL
Sbjct: 4 LSGYINKPVTVITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVD----LGLY 59
Query: 386 VCRGTSVVLICPMD 427
+ RG + + D
Sbjct: 60 MLRGDCIACVGETD 73
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 52.0 bits (119), Expect = 8e-06
Identities = 29/86 (33%), Positives = 44/86 (51%)
Frame = +2
Query: 179 KRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLL 358
K K S +L ++L+K I V GGR+ G L+G+D LNLV+D E + +
Sbjct: 47 KMAKVSQPELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQVHPEAGNPNVW 106
Query: 359 DDTRALGLVVCRGTSVVLICPMDGME 436
D G VV RG SV + ++ ++
Sbjct: 107 QDGDRCGTVVVRGNSVTSLEALENVK 132
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
DL KYL++ + V+ G R+ G+L+GYD LN+VL+++ E K+ + +G
Sbjct: 8 DLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE--------EKVDGEKVKIGS 59
Query: 383 VVCRGTSVVLICPMDGM 433
V RG SV++I +D M
Sbjct: 60 VAIRGNSVIMIETLDKM 76
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 49.6 bits (113), Expect = 4e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 212 KYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVC 391
+Y++K +R++ G R GIL+G+D LNLVLD++T P +G+VV
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTTEKTP---------MGMVVV 79
Query: 392 RGTSVV 409
RG SVV
Sbjct: 80 RGNSVV 85
>UniRef50_UPI0000499B3D Cluster: hypothetical protein 7.t00009; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 7.t00009 - Entamoeba histolytica HM-1:IMSS
Length = 103
Score = 48.0 bits (109), Expect = 1e-04
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = +2
Query: 185 RKESILDLSKYLEKSIRVKFAGGREA------------AGILKGYDPLLNLVLDNTTEFL 328
R ++ DL Y+EK + V+F G+E+ GIL+ YD NL L N + +
Sbjct: 6 RYTTLSDLGSYIEKEVIVQFNDGKESLKLYLIYILTQVEGILQNYDDRFNLFLTNAIQHI 65
Query: 329 RDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDGMEAI 442
+ +D L TR LG V C+G+SV+ + +G+ I
Sbjct: 66 NE-NDKNTSLKTTRKLGEVFCKGSSVLELTLKEGIVKI 102
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 48.0 bits (109), Expect = 1e-04
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +2
Query: 176 EKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKL 355
+K + +I +Y+EK + + G R+ GIL+GYD +N+VLD E K
Sbjct: 9 KKSTEANIAVFQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKQ 60
Query: 356 LDDTRALGLVVCRGTSVVLI 415
+ A+G++V RG SVV++
Sbjct: 61 GGEKVAIGMIVIRGNSVVML 80
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 46.4 bits (105), Expect = 4e-04
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L YLEK I VK G R G+L GYD +NLVLD + +PD D +G+
Sbjct: 7 ELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYD-ASNPD-----TDKHIPIGM 60
Query: 383 VVCRGTSVVLICPMD 427
++ G S++ + +D
Sbjct: 61 IMILGNSILSVETID 75
>UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces
cerevisiae YFL017wa SNP2 snRNP G protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P40204
Saccharomyces cerevisiae YFL017wa SNP2 snRNP G protein -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 71
Score = 46.0 bits (104), Expect = 5e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +2
Query: 212 KYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVC 391
+Y++K + ++ G R+ GIL+GYD LNLVLDN + + + + V
Sbjct: 6 QYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEE--------GEVQMGPQTVV 57
Query: 392 RGTSVVLICPMDGM 433
RG S+V I P+D +
Sbjct: 58 RGNSIVSIEPLDSL 71
>UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putative;
n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 81
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +2
Query: 191 ESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTR 370
+++ +L+ ++EK I VK GGR +G+L+G D +++VL + + R+ + ++ R
Sbjct: 5 KTLPNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNA----AVSEEAR 60
Query: 371 -ALGLVVCRGTSVVLICPMD 427
ALG V RG+++V I D
Sbjct: 61 LALGTTVIRGSAIVEIVSAD 80
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRG 397
+EK + + G R+ GIL+GYD +N+VLD E K + A+G+VV RG
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKQGGEKVAIGMVVIRG 52
Query: 398 TSVVLI 415
SVV++
Sbjct: 53 NSVVML 58
>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
Archaea|Rep: Putative snRNP Sm-like protein -
Archaeoglobus fulgidus
Length = 77
Score = 42.7 bits (96), Expect = 0.005
Identities = 28/77 (36%), Positives = 39/77 (50%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L++ L+ + V+ GGRE G L GYD +NLVL + E + R +G V
Sbjct: 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEIQNG--------EVVRKVGSV 60
Query: 386 VCRGTSVVLICPMDGME 436
V RG +VV + P G E
Sbjct: 61 VIRGDTVVFVSPAPGGE 77
>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 80
Score = 42.3 bits (95), Expect = 0.007
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +2
Query: 182 RRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLD 361
+R ILD + + + GGRE G+L+GYD +NLVLD E ++
Sbjct: 8 KRPMDILD-QVLNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKAEEIVQ---------G 57
Query: 362 DTRALGLVVCRGTSVVLICP 421
+++G ++ RG +V+ I P
Sbjct: 58 QAQSIGTLIIRGDNVIYISP 77
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 41.9 bits (94), Expect = 0.009
Identities = 27/112 (24%), Positives = 52/112 (46%)
Frame = +2
Query: 92 KFDNCNTNMASKEGGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGI 271
K D + + E+ ++ N+ E++ L Y+ ++ + A GR G
Sbjct: 33 KIDAREAKIPKRTQHEQGHLQALSNRNQRYDIHETMSGLESYVNTTVSIITADGRNFVGT 92
Query: 272 LKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMD 427
LKG+D +N++LD + E + + + + LGL + RG +V +I +D
Sbjct: 93 LKGFDQTINIILDESHERVYSMNAGIEQV----VLGLHIIRGDNVAVIGQLD 140
>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Methanobacterium thermoautotrophicum
Length = 81
Score = 41.9 bits (94), Expect = 0.009
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L L + +K G RE G+LK +D +NLVL N E L D + TR LG V
Sbjct: 18 LGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVL-NDAEELEDG-------EVTRRLGTV 69
Query: 386 VCRGTSVVLICP 421
+ RG ++V I P
Sbjct: 70 LIRGDNIVYISP 81
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 41.5 bits (93), Expect = 0.012
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 230 IRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVV 409
+++K R G L+G+D +NLV+DNT E +D +G+VV RG SVV
Sbjct: 34 LQIKLNANRVVVGTLRGFDQFMNLVIDNTMEVNG---------NDKNDIGMVVIRGNSVV 84
Query: 410 LI 415
+I
Sbjct: 85 MI 86
>UniRef50_Q4WP21 Cluster: Small nuclear ribonucleoprotein SmB,
putative; n=2; Eukaryota|Rep: Small nuclear
ribonucleoprotein SmB, putative - Aspergillus fumigatus
(Sartorya fumigata)
Length = 357
Score = 41.5 bits (93), Expect = 0.012
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Frame = +2
Query: 185 RKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR---------DP 337
R+++ D + +R+ GR+ G + +D +NLVL +T EF R P
Sbjct: 120 RQQAGQDADTLINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGP 179
Query: 338 DD-PYKLLDDTRALGLVVCRGTSVVLICPMDG 430
+ P ++ R LGL + RGT VV C +DG
Sbjct: 180 SNAPLVEAEEKRTLGLTIVRGTHVV-SCSVDG 210
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 41.5 bits (93), Expect = 0.012
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L L +++ + G RE +GIL+GYD +N+VL N +E + ++ V
Sbjct: 14 LKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASEIING--------ENKGVYDRV 65
Query: 386 VCRGTSVVLICPMDG 430
+ RG +V+ + P G
Sbjct: 66 LVRGDNVIFVSPSKG 80
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 41.5 bits (93), Expect = 0.012
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 386 VCRGTSVVLICPMD 427
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;
Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
RIBONUCLEOPROTEIN G - Encephalitozoon cuniculi
Length = 78
Score = 41.1 bits (92), Expect = 0.016
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 188 KESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE 322
K ++ +L+ L K I V+ GG G+L GYD +N+VL TE
Sbjct: 3 KSAVPNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47
>UniRef50_UPI0000D55DF4 Cluster: PREDICTED: similar to CG31950-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG31950-PA
- Tribolium castaneum
Length = 134
Score = 40.7 bits (91), Expect = 0.021
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L +L KS+R++ GR G+ D N++L + TE+L D+ +++ R LGLV
Sbjct: 39 LRSWLNKSLRIQMFDGRVLVGVFLCTDRDANVILGSCTEYLPAEDNGDGTIEEPRMLGLV 98
Query: 386 VCRGTSV 406
+ G +
Sbjct: 99 MVPGKHI 105
>UniRef50_Q4UC24 Cluster: U6 snRNA-associated Sm-like potein,
putative; n=1; Theileria annulata|Rep: U6
snRNA-associated Sm-like potein, putative - Theileria
annulata
Length = 113
Score = 40.7 bits (91), Expect = 0.021
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 227 SIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSV 406
S+ V GR G+LKG+D L NLVL N E + PD P + L+ LG+ + RG ++
Sbjct: 19 SVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELE----LGIYLLRGDNM 74
Query: 407 VLI 415
I
Sbjct: 75 YRI 77
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 40.7 bits (91), Expect = 0.021
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
+ K + + + + RE G L G+D +N++L++ E+L DP+D + + G +
Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRM 71
Query: 386 VCRGTSVVLICP 421
+ G ++ ++ P
Sbjct: 72 LLSGNNIAILVP 83
>UniRef50_Q4N5C8 Cluster: Small nuclear ribonucleoprotein B,
putative; n=3; Eukaryota|Rep: Small nuclear
ribonucleoprotein B, putative - Theileria parva
Length = 155
Score = 39.9 bits (89), Expect = 0.036
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
+ +L+ ++RV R+ G L YD +NLVL + EF + R LG V
Sbjct: 8 MQHWLQYNVRVTLKDNRKFVGTLVAYDKYMNLVLSDCEEFRMTLGKDKNRTEVKRTLGFV 67
Query: 386 VCRGTSVV 409
+ RG ++V
Sbjct: 68 LLRGENIV 75
>UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G,
putative; n=2; Piroplasmida|Rep: Small nuclear
ribonucleoprotein G, putative - Theileria parva
Length = 86
Score = 39.9 bits (89), Expect = 0.036
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +2
Query: 236 VKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVV 409
V G R G+L+GYD +N+VLDN E + +D LG+VV RG S++
Sbjct: 27 VHLNGSRHVVGVLRGYDTFMNIVLDNALEVVG---------EDQVDLGVVVVRGNSIL 75
>UniRef50_Q3LW01 Cluster: MRNA splicing factor; n=1; Bigelowiella
natans|Rep: MRNA splicing factor - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 82
Score = 39.5 bits (88), Expect = 0.047
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +2
Query: 194 SILDLSKYLEKSIRV------KFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKL 355
S + L KY+ K I + + G + L YD +NLVL + E++ D D ++
Sbjct: 4 STISLKKYINKRINIVTKNYDRINGRYKKFYRLLAYDKFMNLVLSDVEEYINDKKDSQEI 63
Query: 356 LDDTRALGLVVCRGTSVVLI 415
R LGL+V RG+ ++ +
Sbjct: 64 ---RRVLGLMVLRGSEIIYL 80
>UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 39.5 bits (88), Expect = 0.047
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFL-----RDPDDPY----KL 355
DL+KY K +++K R G + G+D +NLVLD+ E + + D+ Y +
Sbjct: 17 DLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKELIPGQGAENKDNLYPGFSNV 76
Query: 356 LDDTRALGLVVCRGTSVVL 412
D +G + RG S+++
Sbjct: 77 TDQLVDIGQAIVRGNSIIM 95
>UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 242
Score = 39.1 bits (87), Expect = 0.063
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L+ YL+K + V GR+ G+L+ +D N VL+ E D + D LGL
Sbjct: 15 LASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGD----IYCDI-PLGLY 69
Query: 386 VCRGTSVVLICPMD 427
V RG +VVL+ +D
Sbjct: 70 VIRGENVVLLGELD 83
>UniRef50_Q5CME6 Cluster: Similar to small nuclear
ribonucleoprotein; n=2; Cryptosporidium|Rep: Similar to
small nuclear ribonucleoprotein - Cryptosporidium
hominis
Length = 139
Score = 38.7 bits (86), Expect = 0.083
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEF--LRDPDDPYKLLDDTRALG 379
+ KY+ IRV R G L +D +NLVL + E+ ++ ++P +L R+LG
Sbjct: 1 MQKYINYRIRVTVQDDRVMVGNLMAFDRHMNLVLSDCQEYRRVKKGEEPKEL---KRSLG 57
Query: 380 LVVCRGTSVV 409
L++ RG ++V
Sbjct: 58 LIMLRGENIV 67
>UniRef50_A5K5F8 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Plasmodium vivax
Length = 95
Score = 38.7 bits (86), Expect = 0.083
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +2
Query: 200 LDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALG 379
+++ YLE I V R G LKG+D N++L N E + YK + +LG
Sbjct: 4 INIESYLENEILVITNDSRIFTGKLKGFDQTTNIILGNCYERI------YKESLEKISLG 57
Query: 380 LVVCRGTSVVLICPMD 427
L + RG +V LI +D
Sbjct: 58 LYIIRGDTVTLIGEID 73
>UniRef50_Q8ILU8 Cluster: Ribonucleoprotein, putative; n=2;
Plasmodium|Rep: Ribonucleoprotein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 201
Score = 38.3 bits (85), Expect = 0.11
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L +L+ +RV + R G YD +N+VL + EF + L + R +GL+
Sbjct: 7 LETWLQYRVRVTISDTRYFVGTFLSYDRHMNIVLVDAEEFRKVKSQENSLKEIKRVVGLI 66
Query: 386 VCRGTSVV 409
+ RG ++V
Sbjct: 67 LIRGENIV 74
>UniRef50_Q4YVP4 Cluster: Ribonucleoprotein, putative; n=3;
Plasmodium (Vinckeia)|Rep: Ribonucleoprotein, putative -
Plasmodium berghei
Length = 194
Score = 38.3 bits (85), Expect = 0.11
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L +L+ +RV + R G YD +N+VL + EF R + + R +GL+
Sbjct: 7 LESWLQYRVRVTISDTRYYVGTFLSYDRHMNIVLVDAEEFRRVKNKENNFKEIKRVVGLI 66
Query: 386 VCRGTSVV 409
+ RG ++V
Sbjct: 67 LIRGDNIV 74
>UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1;
Aeropyrum pernix|Rep: Putative snRNP Sm-like protein -
Aeropyrum pernix
Length = 77
Score = 38.3 bits (85), Expect = 0.11
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = +2
Query: 215 YLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCR 394
Y++ + VK G G+LK YD LN++L + E R LGL + R
Sbjct: 16 YVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDAEEIGE---------TSIRRLGLTLVR 66
Query: 395 GTSVVLICP 421
G SVV+I P
Sbjct: 67 GDSVVVITP 75
>UniRef50_Q8IB34 Cluster: Ribonucleoprotein, putative; n=1;
Plasmodium falciparum 3D7|Rep: Ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 74
Score = 37.9 bits (84), Expect = 0.14
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR---DPDDPYKLLDDTRALGLVV 388
+E+ I +K G RE G L YD LN++L N E + +D + R L +V
Sbjct: 1 MEEEIFLKCKGDRELIGKLDAYDNHLNMILSNVRETYKYSVKENDEETVKKMERNLDMVF 60
Query: 389 CRGTSVVLI 415
RG S++L+
Sbjct: 61 VRGDSIILV 69
>UniRef50_A5K5Q0 Cluster: U6 snRNA-associated Sm-like protein LSm3,
putative; n=2; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein LSm3, putative - Plasmodium vivax
Length = 91
Score = 37.9 bits (84), Expect = 0.14
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRD---PDDPYKLLDDTRALGLVV 388
+E+ + +K G RE G L YD LN++L N E + +D + R L +V
Sbjct: 18 MEEEVFLKCKGDREIRGKLDAYDNHLNMILSNAHETYKQSVVENDEESVKKIERNLDMVF 77
Query: 389 CRGTSVVLI 415
RG S++L+
Sbjct: 78 VRGDSIILV 86
>UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=1; Schizosaccharomyces pombe|Rep: U6 snRNA-associated
Sm-like protein LSm8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 94
Score = 37.9 bits (84), Expect = 0.14
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 200 LDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALG 379
+ L+ ++E+ ++V GR G LKG+D NL+L ++ E + D +T LG
Sbjct: 1 MSLADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDM----ETIPLG 56
Query: 380 LVVCRGTSVVLI 415
+ + RG +V ++
Sbjct: 57 VYLLRGENVAMV 68
>UniRef50_Q9Y7M4 Cluster: Probable U6 snRNA-associated Sm-like
protein LSm3; n=8; Ascomycota|Rep: Probable U6
snRNA-associated Sm-like protein LSm3 -
Schizosaccharomyces pombe (Fission yeast)
Length = 93
Score = 37.9 bits (84), Expect = 0.14
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +2
Query: 200 LDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE----FLRDPDDPYKLLDD 364
LDL + L++ + VK G RE G L YD LN+VL + E F + D K L
Sbjct: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKT 70
Query: 365 TRA-LGLVVCRGTSVVLICP 421
R ++ RG SV+LI P
Sbjct: 71 IRKHYEMLFVRGDSVILIAP 90
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 37.5 bits (83), Expect = 0.19
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L + + + + +K G + G L G+D +NL+LD++ E + + + LG +
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAE--------GEAKGLGSI 61
Query: 386 VCRGTSVVLICP 421
V RG +VV+I P
Sbjct: 62 VVRGDNVVMISP 73
>UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog;
n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
homolog - Pyrobaculum aerophilum
Length = 85
Score = 37.1 bits (82), Expect = 0.25
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L+K L K I + GG G+L YD +NLVL++ E L +P TR G +
Sbjct: 16 LTKMLNKEIIARLKGGVAVKGVLTAYDGCMNLVLNDAAE-LDKSGEP-----KTR-YGRI 68
Query: 386 VCRGTSVVLI 415
V RG+ V+ +
Sbjct: 69 VIRGSQVIYV 78
>UniRef50_Q5K8A9 Cluster: RNA cap binding protein, putative; n=1;
Filobasidiella neoformans|Rep: RNA cap binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 135
Score = 36.7 bits (81), Expect = 0.33
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +2
Query: 194 SILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRA 373
S++DL ++K + V GR+ G+ + YD N +L++ E L YKL +
Sbjct: 12 SLVDL---VDKKVLVILRDGRKLIGLFRSYDQFANFLLESCVERLH-----YKLEYADKD 63
Query: 374 LGLVVCRGTSVVLICPMD 427
+G+++ RG +VV + +D
Sbjct: 64 IGVLLVRGENVVALGEID 81
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 35.9 bits (79), Expect = 0.58
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L + + K + + R G L GYD +N+VLD+ E + +R LG V
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDDVDENSENV---------SRKLGTV 58
Query: 386 VCRGTSVVLICP 421
V RG++VV I P
Sbjct: 59 VIRGSNVVRIVP 70
>UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep:
Sm-like protein - Sulfolobus acidocaldarius
Length = 87
Score = 35.9 bits (79), Expect = 0.58
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L L K + VK G E G L+ D +NLVL + TE+ DP G V
Sbjct: 12 LKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDP------VAKYGRV 65
Query: 386 VCRGTSVVLI 415
+ RG++++ I
Sbjct: 66 LIRGSNILFI 75
>UniRef50_P62310 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=39; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm3 - Homo sapiens (Human)
Length = 102
Score = 35.9 bits (79), Expect = 0.58
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 191 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 358
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 359 --DDTRALGLVVCRGTSVVLICP 421
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep:
Sm-like protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 88
Score = 35.5 bits (78), Expect = 0.77
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEF 325
+ + + I V G +E GILKG+D +N+VL++ TE+
Sbjct: 14 IDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEY 53
>UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 84
Score = 35.5 bits (78), Expect = 0.77
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 176 EKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKL 355
EK + + LS +EK ++VK G+E G+L YD N++L + E + D K
Sbjct: 3 EKPMPQDYIRLS--MEKRVKVKVQEGQELEGVLHAYDEHYNIILGDVLESIMGLDKNGKF 60
Query: 356 LD-DTRALGLVVCRGTSVVLI 415
+ + ++ RG +V I
Sbjct: 61 IPVRQNQIDMLFVRGDRIVSI 81
>UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babesia
bovis|Rep: Sm domain containing protein - Babesia bovis
Length = 159
Score = 35.1 bits (77), Expect = 1.0
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEF-LRDPDDPYK-LLDDTRALG 379
+ ++L+ +RV GR+ G +D +NLVL + EF + P K ++ R LG
Sbjct: 8 MQQWLQYRVRVAIKDGRKFVGTFIAFDKHMNLVLADCEEFRITKGKGPDKQKVELKRTLG 67
Query: 380 LVVCRGTSVV 409
++ RG ++V
Sbjct: 68 FIMLRGENIV 77
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 35.1 bits (77), Expect = 1.0
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L +L+ + V+ G+ G L +D LNLVLD+ E D D + LG V
Sbjct: 7 LRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVEI--DEDSEVR-------LGRV 57
Query: 386 VCRGTSVVLICPMD 427
+ RG SV LI P +
Sbjct: 58 LIRGDSVTLISPAE 71
>UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_47464_47838 - Giardia lamblia
ATCC 50803
Length = 124
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +2
Query: 161 TGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE 322
T NK + D L K + V+ GR G+LK YD LNLV TE
Sbjct: 41 TMSNKISDSPYAFFDEVLALRKPVLVQLRSGRFITGVLKAYDRHLNLVFSEATE 94
>UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like - Yarrowia lipolytica
(Candida lipolytica)
Length = 144
Score = 34.7 bits (76), Expect = 1.3
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE-FLRDPDDPYKLLDDTRALGLVVCR 394
+++ + V GGR+ GIL+ +D NLVL +T E + P+ Y ++ R G + R
Sbjct: 24 IDRKVVVTLRGGRKFFGILRSFDQFANLVLQDTYEKYFAVPEKVYG--EEYR--GTYIIR 79
Query: 395 GTSVVLI 415
G +V L+
Sbjct: 80 GENVELM 86
>UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p -
Trypanosoma brucei
Length = 129
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 340
LS+YL + + V GR G+L D L+NLVL + E + D +
Sbjct: 2 LSQYLRRRVSVVTVDGRYLVGVLHAADQLMNLVLTSCAERVFDDE 46
>UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1;
Filobasidiella neoformans|Rep: Sm-like protein, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 95
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +2
Query: 200 LDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD-----DPYKLLD 361
LDL K L + + +K G R G+L YD +N+V+ E + D P
Sbjct: 13 LDLVKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHVVDVTEEGQPLPPRI 72
Query: 362 DTRALGLVVCRGTSVVLICPMD 427
+ R ++ RG V+L+ P +
Sbjct: 73 ERRTAEMLFVRGDGVILLSPAE 94
>UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 234
Score = 34.3 bits (75), Expect = 1.8
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFL--RDPDD--------PYKLLDDT 367
++K + V +E GIL+ YD NLVL E + R+PD P L+ D
Sbjct: 101 VDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHERIAARNPDAEPSSAPSVPRWLIHDV 160
Query: 368 RALGLVVCRGTSVVLICPMD 427
+ G++ RG +V + +D
Sbjct: 161 KLPGVMTIRGENVTICATVD 180
>UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 149
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYD-PLLNLVLDNTTE 322
+L+ ++K ++V A GR GIL G+D P LN++L+N +
Sbjct: 13 ELAGLVDKKVKVILADGRFYEGILTGFDHPSLNILLENAVD 53
>UniRef50_A5ZXY7 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 295
Score = 33.9 bits (74), Expect = 2.4
Identities = 34/111 (30%), Positives = 55/111 (49%)
Frame = +2
Query: 83 SDLKFDNCNTNMASKEGGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREA 262
SD+ F N + +E E++K + + KEK K+S DLS +K + +
Sbjct: 103 SDVCFGPMNQGKSREEAEEEAKKALLQVGFKEKNFKKSPFDLSGGQKKRVAI-------- 154
Query: 263 AGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLI 415
AG+L +P + L+LD T L DP ++LD L V RG +++L+
Sbjct: 155 AGVL-AMNPKI-LILDEPTAGL-DPKGRDEILDQIAELHKV--RGITIILV 200
>UniRef50_Q9FI15 Cluster: Similarity to small nuclear
ribonucleoprotein; n=6; Viridiplantae|Rep: Similarity to
small nuclear ribonucleoprotein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 254
Score = 33.9 bits (74), Expect = 2.4
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +2
Query: 212 KYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDP-----DDPYKLLDDTRAL 376
+++ +RV GR+ G +D +NLVL + EF + P + ++ R L
Sbjct: 11 QFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKTNEEREERRTL 70
Query: 377 GLVVCRGTSVV 409
GLV+ RG V+
Sbjct: 71 GLVLLRGEEVI 81
>UniRef50_Q7REA8 Cluster: Putative uncharacterized protein PY05157;
n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05157 - Plasmodium yoelii yoelii
Length = 1705
Score = 33.9 bits (74), Expect = 2.4
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +2
Query: 86 DLKFDNCNTNMASKEGGEKSKGSQV-----TGDNKEKRRKESIL-DLSKYLEKSIRVKFA 247
D+K D +N+ K G K+KG V ++K+K K+ I D + + K +R K
Sbjct: 24 DIKKDGNQSNLEVKTGNNKNKGENVIKKDNKNESKDKIPKDKISNDENNLIYKKLRKKLN 83
Query: 248 GGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTR 370
+ G PL+ V D+ + +++ +DTR
Sbjct: 84 NLNYNKPLCVGCSPLVQAVFDDLIQAIQNFQKISDKYEDTR 124
>UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 129
Score = 33.9 bits (74), Expect = 2.4
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L ++K + V GR+ GI++ +D N+VL +T E + D Y + LGL
Sbjct: 5 LGDEVDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIY-VGDCY----SDKNLGLF 59
Query: 386 VCRGTSVVLICPMD 427
RG +VV++ +D
Sbjct: 60 FIRGDNVVILGEID 73
>UniRef50_Q54F39 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 394
Score = 33.5 bits (73), Expect = 3.1
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 161 TGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE 322
T DN++K + + IL S L+K ++V FAGG +K LL + D + +
Sbjct: 3 TTDNEKKVKLQQILTDSLLLQKQVKVIFAGGNNNETTIKQITTLLGQLRDKSKQ 56
>UniRef50_Q7S1Q3 Cluster: Putative uncharacterized protein
NCU09512.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU09512.1 - Neurospora crassa
Length = 168
Score = 33.5 bits (73), Expect = 3.1
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRAL 376
L++ + VK G RE G L YD NLVL E + DD DD +A+
Sbjct: 22 LDEVVCVKLRGDRELKGRLHAYDSHCNLVLGEVEETIYVVDDEDTEEDDLKAV 74
>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 84
Score = 33.5 bits (73), Expect = 3.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFL 328
LS+ + S+ V+ G E G L+ D +N+VLD T EF+
Sbjct: 21 LSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFV 61
>UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1;
uncultured crenarchaeote|Rep: Putative uncharacterized
protein - uncultured crenarchaeote
Length = 89
Score = 33.5 bits (73), Expect = 3.1
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFL------RDPDDPYKLLDDT 367
L + + K + VK G R G +KG+D +N+V+ TE + D + K +
Sbjct: 11 LQESVGKIVLVKLKGRRSVKGKIKGFDKQMNIVITEATEVIEQQSNNNDNSEKGKGQEQE 70
Query: 368 RALGLVVCRGTSVVLI 415
+G + RG +V+ I
Sbjct: 71 TQVGDALIRGDNVITI 86
>UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 158
Score = 33.1 bits (72), Expect = 4.1
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR-DPDDPYKLLDDTRALGL 382
LSK++ ++V + R G + +D N+VL + E+ R + +L + R +GL
Sbjct: 9 LSKFINSRVKVVISDHRYFVGQMLAFDTHSNIVLKDCEEYRRLNRRKAGELQEAKRNIGL 68
Query: 383 VVCRGTSVVLI 415
++ RG +V+ I
Sbjct: 69 MILRGETVLHI 79
>UniRef50_UPI0000513250 Cluster: PREDICTED: similar to CG31950-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG31950-PA - Apis mellifera
Length = 103
Score = 32.7 bits (71), Expect = 5.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L +L +++R+K GR G D N++L + +EFL + + R LGLV
Sbjct: 36 LRGWLNRNLRIKMTDGRVLIGAFLCTDRDANVILGSCSEFLSEDH------TEARTLGLV 89
Query: 386 VCRGTSVVLI 415
+ G +V I
Sbjct: 90 MIPGRHIVTI 99
>UniRef50_Q72NN3 Cluster: Putative uncharacterized protein; n=1;
Leptospira interrogans serovar Copenhageni|Rep: Putative
uncharacterized protein - Leptospira interrogans
serogroup Icterohaemorrhagiae serovarcopenhageni
Length = 132
Score = 32.7 bits (71), Expect = 5.4
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3
Query: 237 TRMLFSKYLLRSNIDSFLLFSLLSPVTWLPFDF 139
+R FSKY RSNI FL+ SLLS + L F
Sbjct: 3 SRYSFSKYFTRSNIIQFLVLSLLSQILILIITF 35
>UniRef50_A7BMV6 Cluster: Membrane protein; n=1; Beggiatoa sp.
SS|Rep: Membrane protein - Beggiatoa sp. SS
Length = 319
Score = 32.7 bits (71), Expect = 5.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 231 MLFSKYLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDA--MFVLQLSNFKSLPTLFLFD* 58
+LF Y L S+ L S + +L F +SPP+L + +L L F +L L
Sbjct: 192 LLFFSYSLPSSFSPLLFLSSVFLSAFLMFPYSPPALSSRNFLLLYLPCFSTLCLLAFL-- 249
Query: 57 SFELFAIYIIVFFLSS 10
SF F + F+SS
Sbjct: 250 SFSSFFFLFLFLFISS 265
>UniRef50_Q4D1G4 Cluster: Mucin-associated surface protein (MASP),
putative; n=18; Trypanosoma cruzi|Rep: Mucin-associated
surface protein (MASP), putative - Trypanosoma cruzi
Length = 270
Score = 32.7 bits (71), Expect = 5.4
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 98 DNCNTNMASKEGGEKSKGSQVT--GDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGI 271
DN N N +KE EK + + G+N K ++E+ + + + + V AGG+E +
Sbjct: 119 DNNNKNTENKEKEEKEEEEEEEEHGENGAKGKEET--EKEEAVASTTEVTSAGGQEQRSL 176
Query: 272 LKGYDPLLNLVLDNTTEFLRDPDDP 346
G N+ N+T D DDP
Sbjct: 177 SSGAAGASNITNPNSTPTTGD-DDP 200
>UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 148
Score = 32.7 bits (71), Expect = 5.4
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRG 397
++K + V G++ G+L+ YD NLVL +T E + + Y D A G+ + RG
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERV-FVGNRY---GDV-ARGIFLVRG 76
Query: 398 TSVVLICPMD 427
+VVL+ +D
Sbjct: 77 ENVVLMGEID 86
>UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Rep:
SnRNP homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 69
Score = 32.7 bits (71), Expect = 5.4
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLD 310
L + LE+++ V+ G E G+L GYD +N+V++
Sbjct: 18 LEESLEETVTVRLKDGDEFTGVLTGYDQHMNVVIE 52
>UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=27; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm5 - Homo sapiens (Human)
Length = 91
Score = 32.7 bits (71), Expect = 5.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 340
+ K + I + +E G L G+D +N+VL++ TEF P+
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE 62
>UniRef50_Q8F7N9 Cluster: Putative uncharacterized protein; n=3;
Leptospira|Rep: Putative uncharacterized protein -
Leptospira interrogans
Length = 264
Score = 32.3 bits (70), Expect = 7.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 80 GSDLKFDNCNTNMASKEGGEKSKGSQVTGDNKEKRRKESILDLSKY 217
GS L F NC N+ S E G S+ + G+ E+I+D++ +
Sbjct: 133 GSKLIFQNCKENVPSAEKGGSSEVTTFNGEISRDGSLEAIIDINSF 178
>UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E
homolog; n=2; Bigelowiella natans|Rep: Small nucleolar
ribonucleoprotein E homolog - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 71
Score = 32.3 bits (70), Expect = 7.2
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 188 KESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTT 319
K +I DL ++E+ I+++ G L+G+D LN+VL+ ++
Sbjct: 4 KINIPDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKSS 47
>UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza
sativa|Rep: OSIGBa0140O07.9 protein - Oryza sativa
(Rice)
Length = 136
Score = 32.3 bits (70), Expect = 7.2
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L+ +L+K + V GR+ G L +D N+VL E + + L D LGL
Sbjct: 16 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGE----LYCDV-PLGLY 70
Query: 386 VCRGTSVVLI 415
V RG +VVLI
Sbjct: 71 VIRGENVVLI 80
>UniRef50_Q5CLJ8 Cluster: U6 snRNA-associated sm-like protein; n=2;
Cryptosporidium|Rep: U6 snRNA-associated sm-like protein
- Cryptosporidium hominis
Length = 98
Score = 32.3 bits (70), Expect = 7.2
Identities = 23/87 (26%), Positives = 45/87 (51%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L +++ K++ V + G L G+D L N+VL N +E + + D K+ +T ++ +
Sbjct: 6 LEQFINKTVSVLTVDNKVYVGNLVGFDQLTNIVLQNCSEKIYN-KDLNKV--ETVSMESL 62
Query: 386 VCRGTSVVLICPMDGMEAIPNPFINQE 466
V RG + ++ +G E + F N +
Sbjct: 63 VLRGDCIGMV--GEGYEDLTQDFENDQ 87
>UniRef50_A7APW1 Cluster: LSM domain containing protein; n=1;
Babesia bovis|Rep: LSM domain containing protein -
Babesia bovis
Length = 89
Score = 32.3 bits (70), Expect = 7.2
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR----DPDDPYKLLDDT-RALGL 382
L++ + +K GGRE G L YD N++L + E DP ++ T + G+
Sbjct: 13 LDERVYLKCKGGREIVGQLHAYDEHCNMLLSDAIETFTSVELDPTTNQEVTTITSKDSGV 72
Query: 383 VVCRGTSVVLI 415
V RG +++L+
Sbjct: 73 VFVRGDALILL 83
>UniRef50_Q6BIX4 Cluster: Similar to CA2640|IPF2930 Candida albicans
IPF2930 Suppressor of PAB1; n=3; Saccharomycetaceae|Rep:
Similar to CA2640|IPF2930 Candida albicans IPF2930
Suppressor of PAB1 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 91
Score = 32.3 bits (70), Expect = 7.2
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 227 SIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTR--ALGLVVCRGT 400
S++ R G L+G+D N++++N E L PD+ DD + LGL + RG
Sbjct: 3 SLKEFLENARLFEGTLQGFDNSTNVIINNCIERLIYPDEQ----DDNQEIPLGLYLMRGG 58
Query: 401 SVVLICPMD 427
++V I +D
Sbjct: 59 NIVCIGEVD 67
>UniRef50_Q59ZT4 Cluster: Potential RNA processing complex subunit
Lsm5; n=2; Saccharomycetales|Rep: Potential RNA
processing complex subunit Lsm5 - Candida albicans
(Yeast)
Length = 119
Score = 32.3 bits (70), Expect = 7.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE 322
+ + + K +RV G +E G L G+D +N+VL++ TE
Sbjct: 58 IDRSVGKRVRVLMTGDKEFNGKLIGFDDYVNMVLEDVTE 96
>UniRef50_Q2UFI8 Cluster: Predicted protein; n=4; Trichocomaceae|Rep:
Predicted protein - Aspergillus oryzae
Length = 1548
Score = 32.3 bits (70), Expect = 7.2
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 177 SLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD 61
S+ +PVT FDFSPP L + Q + P+ F FD
Sbjct: 929 SIAAPVTTKQFDFSPPGLPTL-EAQTGTYHGNPSSFAFD 966
>UniRef50_A3LX11 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 92
Score = 32.3 bits (70), Expect = 7.2
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 212 KYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVC 391
+++ ++RV GR GIL DP NL+L N E D P + R +GLV
Sbjct: 13 QFIGSNLRVAIKDGRVVTGILTVIDPFGNLLLSNVIEESEDIISPPGI--HKRDIGLVSV 70
Query: 392 RGTSVVLI 415
++V +
Sbjct: 71 PRETIVTV 78
>UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep:
Zgc:101136 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 133
Score = 31.9 bits (69), Expect = 9.5
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRG 397
++K V GR GIL+ D NLVL T E + K D R G+ V RG
Sbjct: 14 IDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGK---KFGDIPR--GIFVVRG 68
Query: 398 TSVVLICPMD 427
+VVL+ +D
Sbjct: 69 ENVVLLGEVD 78
>UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein,
putative; n=3; Plasmodium|Rep: Small nuclear ribonuclear
protein, putative - Plasmodium falciparum (isolate 3D7)
Length = 101
Score = 31.9 bits (69), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEF 325
+ K + I + G +E G L G+D +N+VL++ TE+
Sbjct: 16 MDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEY 55
>UniRef50_Q4UCJ8 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 1729
Score = 31.9 bits (69), Expect = 9.5
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +2
Query: 110 TNMASKEGGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDP 289
TNM S + +K+K + + +K+ + E ILD + SI ++F + +LK +
Sbjct: 1218 TNMGSADLNDKNKLTNGSSTSKKTKLIE-ILDNKRVQNLSIILRFNSYEDYLTLLKNVNS 1276
Query: 290 LLNLVLDNTTE 322
L+ + L+NTT+
Sbjct: 1277 LVYINLNNTTK 1287
>UniRef50_Q0UCR7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 134
Score = 31.9 bits (69), Expect = 9.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 173 KEKRRKESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE 322
+EK LDL + +++ + VK G RE G L YD NLVL + E
Sbjct: 2 EEKEETNEPLDLVRLCIDEVVIVKLRGDRELKGRLHAYDSHCNLVLGDVEE 52
>UniRef50_A7EA47 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 640
Score = 31.9 bits (69), Expect = 9.5
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 83 SDLKFDNCNTNMASKEGGEKSKGSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGREA 262
S K D+ N +M S G + + ++KEK++K + EKS K G+E
Sbjct: 570 SHSKKDDDNASMGSGRGERTERVEKEEKESKEKKKKTPLSIFRSKTEKSSSSK---GKEK 626
Query: 263 AGILKGYDPLL 295
G G+ PLL
Sbjct: 627 EGKKMGHHPLL 637
>UniRef50_A7D237 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Like-Sm
ribonucleoprotein, core - Halorubrum lacusprofundi ATCC
49239
Length = 80
Score = 31.9 bits (69), Expect = 9.5
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL- 382
L LE+ + V G GIL GYD +N+V++ T+ DD LD A+ +
Sbjct: 9 LEASLEEPVTVHLKDGTTYYGILAGYDQHMNIVIEPETDVDDRVDDD---LDGEFAVAIE 65
Query: 383 --VVCRGTSVVLI 415
+ RG +VV I
Sbjct: 66 DTTIIRGDNVVTI 78
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 31.9 bits (69), Expect = 9.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTE 322
L + KS+ VK GR +G L+ D +N+VLD+ E
Sbjct: 16 LGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEE 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,709,361
Number of Sequences: 1657284
Number of extensions: 8392896
Number of successful extensions: 27722
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 26444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27676
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -