Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G01
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018621-1|AAH18621.1| 103|Homo sapiens LSM7 homolog, U6 small ... 175 8e-44
AF182293-1|AAD56231.1| 103|Homo sapiens U6 snRNA-associated Sm-... 175 8e-44
AC005258-2|AAG45442.1| 103|Homo sapiens U6 snRNA-associated Sm-... 175 8e-44
AC005258-1|AAC25622.1| 145|Homo sapiens R30783_1 protein. 128 2e-29
X85373-1|CAA59689.1| 76|Homo sapiens Sm protein G protein. 53 7e-07
CR456918-1|CAG33199.1| 76|Homo sapiens SNRPG protein. 53 7e-07
BC106055-1|AAI06056.1| 76|Homo sapiens small nuclear ribonucle... 53 7e-07
BC071880-1|AAH71880.1| 76|Homo sapiens small nuclear ribonucle... 53 7e-07
BC070166-1|AAH70166.1| 76|Homo sapiens small nuclear ribonucle... 53 7e-07
BC066302-1|AAH66302.1| 76|Homo sapiens small nuclear ribonucle... 53 7e-07
BC022432-1|AAH22432.1| 76|Homo sapiens small nuclear ribonucle... 53 7e-07
BC000070-1|AAH00070.1| 76|Homo sapiens small nuclear ribonucle... 53 7e-07
AC079338-2|AAX81996.1| 76|Homo sapiens unknown protein. 53 7e-07
BC035103-1|AAH35103.1| 64|Homo sapiens SNRPG protein protein. 47 4e-05
BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small ... 42 0.002
BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small ... 42 0.002
AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated Sm-... 42 0.002
AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1 prot... 42 0.002
BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein. 38 0.017
CR457185-1|CAG33466.1| 102|Homo sapiens LSM3 protein. 36 0.089
BC007055-1|AAH07055.1| 102|Homo sapiens LSM3 homolog, U6 small ... 36 0.089
AJ238095-1|CAB45866.1| 102|Homo sapiens Lsm3 protein protein. 36 0.089
AF182418-1|AAG14954.1| 102|Homo sapiens MDS017 protein. 36 0.089
AF182289-1|AAD56227.1| 102|Homo sapiens U6 snRNA-associated Sm-... 36 0.089
BC005938-1|AAH05938.1| 91|Homo sapiens LSM5 homolog, U6 small ... 33 0.83
AJ238097-1|CAB45868.1| 91|Homo sapiens Lsm5 protein protein. 33 0.83
AF182291-1|AAD56229.1| 91|Homo sapiens U6 snRNA-associated Sm-... 33 0.83
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 31 1.9
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 31 1.9
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 31 1.9
BC056152-1|AAH56152.1| 622|Homo sapiens zinc finger, DHHC-type ... 31 3.3
BC050690-1|AAH50690.2| 492|Homo sapiens zinc finger, DHHC-type ... 31 3.3
BC036020-1|AAH36020.1| 622|Homo sapiens zinc finger, DHHC-type ... 31 3.3
AK001831-1|BAA91930.1| 446|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK001714-1|BAA91856.1| 481|Homo sapiens protein ( Homo sapiens ... 31 3.3
AB097027-1|BAC77380.1| 622|Homo sapiens putative MAPK activatin... 31 3.3
AB097014-1|BAC77367.1| 622|Homo sapiens putative NFkB activatin... 31 3.3
AB024495-1|BAC22090.1| 622|Homo sapiens huntingtin interacting ... 31 3.3
AK127297-1|BAC86923.1| 574|Homo sapiens protein ( Homo sapiens ... 30 4.4
AK055962-1|BAB71057.1| 645|Homo sapiens UBUNIT (EC 2.4.1.-). p... 30 4.4
BC017473-1|AAH17473.1| 325|Homo sapiens chromosome 2 open readi... 30 5.8
AK025473-1|BAB15142.1| 325|Homo sapiens protein ( Homo sapiens ... 30 5.8
AC012361-1|AAY14959.1| 262|Homo sapiens unknown protein. 30 5.8
>BC018621-1|AAH18621.1| 103|Homo sapiens LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 103
Score = 175 bits (426), Expect = 8e-44
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +2
Query: 170 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPY 349
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RDPDD Y
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62
Query: 350 KLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 466
KL +DTR LGLVVCRGTSVVLICP DGMEAIPNPFI Q+
Sbjct: 63 KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101
>AF182293-1|AAD56231.1| 103|Homo sapiens U6 snRNA-associated
Sm-like protein LSm7 protein.
Length = 103
Score = 175 bits (426), Expect = 8e-44
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +2
Query: 170 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPY 349
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RDPDD Y
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62
Query: 350 KLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 466
KL +DTR LGLVVCRGTSVVLICP DGMEAIPNPFI Q+
Sbjct: 63 KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101
>AC005258-2|AAG45442.1| 103|Homo sapiens U6 snRNA-associated
Sm-like protein LSm7 protein.
Length = 103
Score = 175 bits (426), Expect = 8e-44
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +2
Query: 170 NKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPY 349
+KEK++KESILDLSKY++K+IRVKF GGREA+GILKG+DPLLNLVLD T E++RDPDD Y
Sbjct: 3 DKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62
Query: 350 KLLDDTRALGLVVCRGTSVVLICPMDGMEAIPNPFINQE 466
KL +DTR LGLVVCRGTSVVLICP DGMEAIPNPFI Q+
Sbjct: 63 KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQ 101
>AC005258-1|AAC25622.1| 145|Homo sapiens R30783_1 protein.
Length = 145
Score = 128 bits (308), Expect = 2e-29
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +2
Query: 251 GREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMDG 430
GR +GILKG+DPLLNLVLD T E++RDPDD YKL +DTR LGLVVCRGTSVVLICP DG
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDG 131
Query: 431 MEAIPNPFINQE 466
MEAIPNPFI Q+
Sbjct: 132 MEAIPNPFIQQQ 143
>X85373-1|CAA59689.1| 76|Homo sapiens Sm protein G protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>CR456918-1|CAG33199.1| 76|Homo sapiens SNRPG protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC106055-1|AAI06056.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC071880-1|AAH71880.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC070166-1|AAH70166.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC066302-1|AAH66302.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC022432-1|AAH22432.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC000070-1|AAH00070.1| 76|Homo sapiens small nuclear
ribonucleoprotein polypeptide G protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>AC079338-2|AAX81996.1| 76|Homo sapiens unknown protein.
Length = 76
Score = 52.8 bits (121), Expect = 7e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 203 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 382
+L K+++K + +K GGR GIL+G+DP +NLV+D E +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGM 59
Query: 383 VVCRGTSVVLI 415
VV RG S++++
Sbjct: 60 VVIRGNSIIML 70
>BC035103-1|AAH35103.1| 64|Homo sapiens SNRPG protein protein.
Length = 64
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +2
Query: 218 LEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLVVCRG 397
++K + +K GGR GIL+G+DP +NLV+D E +G+VV RG
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATS--------GQQNNIGMVVIRG 52
Query: 398 TSVVLI 415
S++++
Sbjct: 53 NSIIML 58
>BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 386 VCRGTSVVLICPMD 427
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 386 VCRGTSVVLICPMD 427
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated
Sm-like protein LSm8 protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 386 VCRGTSVVLICPMD 427
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1
protein.
Length = 96
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 386 VCRGTSVVLICPMD 427
+ RG +V +I +D
Sbjct: 61 IVRGDNVAVIGEID 74
>BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein.
Length = 67
Score = 38.3 bits (85), Expect = 0.017
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGLV 385
L Y+ +++ V + GR G LKG+D +NL+LD + E + + + LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 386 VCRGTSV 406
+ RG +V
Sbjct: 61 IVRGDNV 67
>CR457185-1|CAG33466.1| 102|Homo sapiens LSM3 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.089
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 191 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 358
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 359 --DDTRALGLVVCRGTSVVLICP 421
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>BC007055-1|AAH07055.1| 102|Homo sapiens LSM3 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.089
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 191 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 358
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 359 --DDTRALGLVVCRGTSVVLICP 421
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>AJ238095-1|CAB45866.1| 102|Homo sapiens Lsm3 protein protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.089
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 191 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 358
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 359 --DDTRALGLVVCRGTSVVLICP 421
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>AF182418-1|AAG14954.1| 102|Homo sapiens MDS017 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.089
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 191 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 358
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 359 --DDTRALGLVVCRGTSVVLICP 421
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>AF182289-1|AAD56227.1| 102|Homo sapiens U6 snRNA-associated
Sm-like protein LSm3 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.089
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 191 ESILDLSKY-LEKSIRVKFAGGREAAGILKGYDPLLNLVL---DNTTEFLRDPDDPYKLL 358
E LDL + L++ I VK RE G L YD LN++L + T + ++ Y+ +
Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74
Query: 359 --DDTRALGLVVCRGTSVVLICP 421
R + ++ RG VVL+ P
Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAP 97
>BC005938-1|AAH05938.1| 91|Homo sapiens LSM5 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 91
Score = 32.7 bits (71), Expect = 0.83
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 340
+ K + I + +E G L G+D +N+VL++ TEF P+
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE 62
>AJ238097-1|CAB45868.1| 91|Homo sapiens Lsm5 protein protein.
Length = 91
Score = 32.7 bits (71), Expect = 0.83
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 340
+ K + I + +E G L G+D +N+VL++ TEF P+
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE 62
>AF182291-1|AAD56229.1| 91|Homo sapiens U6 snRNA-associated
Sm-like protein LSm5 protein.
Length = 91
Score = 32.7 bits (71), Expect = 0.83
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 206 LSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPD 340
+ K + I + +E G L G+D +N+VL++ TEF P+
Sbjct: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE 62
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 149 GSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGRE--AAGILKGYDPLLNLVLDNTTE 322
GS+VTG + EK+ + SI L + + GRE A G+++G D + +N+
Sbjct: 21288 GSEVTGFHVEKKERNSI------LWQKVNTSPISGREYRATGLVEGLDYQFRVYAENSAG 21341
Query: 323 FLRDPDDPYK 352
L P DP K
Sbjct: 21342 -LSSPSDPSK 21350
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 149 GSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGRE--AAGILKGYDPLLNLVLDNTTE 322
GS+VTG + EK+ + SI L + + GRE A G+++G D + +N+
Sbjct: 28712 GSEVTGFHVEKKERNSI------LWQKVNTSPISGREYRATGLVEGLDYQFRVYAENSAG 28765
Query: 323 FLRDPDDPYK 352
L P DP K
Sbjct: 28766 -LSSPSDPSK 28774
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 149 GSQVTGDNKEKRRKESILDLSKYLEKSIRVKFAGGRE--AAGILKGYDPLLNLVLDNTTE 322
GS+VTG + EK+ + SI L + + GRE A G+++G D + +N+
Sbjct: 21288 GSEVTGFHVEKKERNSI------LWQKVNTSPISGREYRATGLVEGLDYQFRVYAENSAG 21341
Query: 323 FLRDPDDPYK 352
L P DP K
Sbjct: 21342 -LSSPSDPSK 21350
>BC056152-1|AAH56152.1| 622|Homo sapiens zinc finger, DHHC-type
containing 13 protein.
Length = 622
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 308 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 362
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 363 WFILFF 368
>BC050690-1|AAH50690.2| 492|Homo sapiens zinc finger, DHHC-type
containing 13 protein.
Length = 492
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 178 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 232
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 233 WFILFF 238
>BC036020-1|AAH36020.1| 622|Homo sapiens zinc finger, DHHC-type
containing 13 protein.
Length = 622
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 308 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 362
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 363 WFILFF 368
>AK001831-1|BAA91930.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ10969 fis, clone PLACE1000909, weakly similar to
ANKYRIN REPEAT-CONTAINING PROTEIN AKR1. ).
Length = 446
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 132 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 186
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 187 WFILFF 192
>AK001714-1|BAA91856.1| 481|Homo sapiens protein ( Homo sapiens
cDNA FLJ10852 fis, clone NT2RP4001498, weakly similar to
ANKYRIN REPEAT-CONTAINING PROTEIN AKR1. ).
Length = 481
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 308 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 362
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 363 WFILFF 368
>AB097027-1|BAC77380.1| 622|Homo sapiens putative MAPK activating
protein protein.
Length = 622
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 308 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 362
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 363 WFILFF 368
>AB097014-1|BAC77367.1| 622|Homo sapiens putative NFkB activating
protein protein.
Length = 622
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 308 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 362
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 363 WFILFF 368
>AB024495-1|BAC22090.1| 622|Homo sapiens huntingtin interacting
protein HIP3RP protein.
Length = 622
Score = 30.7 bits (66), Expect = 3.3
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -3
Query: 216 YLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLFLFD*SFELFAI 37
Y+L N DS+LL L VT F SL F++ N LPT FL F +F
Sbjct: 308 YILDFNSDSWLLKGCLL-VTL----FFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMT 362
Query: 36 YIIVFF 19
+ I+FF
Sbjct: 363 WFILFF 368
>AK127297-1|BAC86923.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ45364 fis, clone BRHIP3016032. ).
Length = 574
Score = 30.3 bits (65), Expect = 4.4
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = -3
Query: 249 PANFTRMLFSKYLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLF 70
PA+F+ + +++L S + +F ++ LL+PVT L +D+ S+ V + + ++L T+F
Sbjct: 257 PASFSPYILTRFLTYSYLLAFNVWLLLAPVT-LCYDWQVGSIP--LVETIWDMRNLATIF 313
Query: 69 L 67
L
Sbjct: 314 L 314
>AK055962-1|BAB71057.1| 645|Homo sapiens UBUNIT (EC 2.4.1.-).
protein.
Length = 645
Score = 30.3 bits (65), Expect = 4.4
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = -3
Query: 249 PANFTRMLFSKYLLRSNIDSFLLFSLLSPVTWLPFDFSPPSLDAMFVLQLSNFKSLPTLF 70
PA+F+ + +++L S + +F ++ LL+PVT L +D+ S+ V + + ++L T+F
Sbjct: 66 PASFSPYILTRFLTYSYLLAFNVWLLLAPVT-LCYDWQVGSIP--LVETIWDMRNLATIF 122
Query: 69 L 67
L
Sbjct: 123 L 123
>BC017473-1|AAH17473.1| 325|Homo sapiens chromosome 2 open reading
frame 43 protein.
Length = 325
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 525 FFFFFLPYLK-IYSYQNYSYPSWLIKGFGIASIPSIGHIKTT 403
F F++P+ K +YS N +P W I G A P I TT
Sbjct: 56 FSAFYVPFAKALYSLTNRRFPVWTISHAGHALAPKDKKILTT 97
>AK025473-1|BAB15142.1| 325|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21820 fis, clone HEP01232. ).
Length = 325
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 525 FFFFFLPYLK-IYSYQNYSYPSWLIKGFGIASIPSIGHIKTT 403
F F++P+ K +YS N +P W I G A P I TT
Sbjct: 56 FSAFYVPFAKALYSLTNRRFPVWTISHAGHALAPKDKKILTT 97
>AC012361-1|AAY14959.1| 262|Homo sapiens unknown protein.
Length = 262
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 525 FFFFFLPYLK-IYSYQNYSYPSWLIKGFGIASIPSIGHIKTT 403
F F++P+ K +YS N +P W I G A P I TT
Sbjct: 56 FSAFYVPFAKALYSLTNRRFPVWTISHAGHALAPKDKKILTT 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,477,435
Number of Sequences: 237096
Number of extensions: 1266432
Number of successful extensions: 6305
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 6258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6305
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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