Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F22
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical p... 128 3e-30
Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical p... 128 3e-30
U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein. 128 3e-30
U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein. 128 3e-30
U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein. 128 3e-30
AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog (he... 33 0.30
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 32 0.52
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 32 0.52
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 32 0.52
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 32 0.52
Z78019-6|CAB01453.2| 370|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81077-11|CAB03068.2| 244|Caenorhabditis elegans Hypothetical p... 28 6.4
>Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical
protein C01G10.11a protein.
Length = 378
Score = 128 bits (310), Expect = 3e-30
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Frame = +3
Query: 282 NGEGDNFTETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWT 461
N + + + FSGSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 41 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 100
Query: 462 ITGNFGNILPIDW-TKSFSRKMHIPTLNLSDTKNSLTPDDEIHSSEDE-AVASDLDMHAL 635
+TGNFGNI P+D+ T S +KM L+ K+ + + +S+DE + +D+H +
Sbjct: 101 LTGNFGNIQPLDFGTSSICKKM-AAALDSDSLKDDASTRRSMTNSDDEDLLRQQMDVHQM 159
Query: 636 I---LGGLHQDHECPVKTADEVIQEIDDMMQ 719
I G E P +TAD+VI+EID+M+Q
Sbjct: 160 IGHHHGSTDTGGETPPQTADQVIEEIDEMLQ 190
>Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical
protein C01G10.11b protein.
Length = 369
Score = 128 bits (310), Expect = 3e-30
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Frame = +3
Query: 282 NGEGDNFTETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWT 461
N + + + FSGSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 41 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 100
Query: 462 ITGNFGNILPIDW-TKSFSRKMHIPTLNLSDTKNSLTPDDEIHSSEDE-AVASDLDMHAL 635
+TGNFGNI P+D+ T S +KM L+ K+ + + +S+DE + +D+H +
Sbjct: 101 LTGNFGNIQPLDFGTSSICKKM-AAALDSDSLKDDASTRRSMTNSDDEDLLRQQMDVHQM 159
Query: 636 I---LGGLHQDHECPVKTADEVIQEIDDMMQ 719
I G E P +TAD+VI+EID+M+Q
Sbjct: 160 IGHHHGSTDTGGETPPQTADQVIEEIDEMLQ 190
>U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein.
Length = 376
Score = 128 bits (310), Expect = 3e-30
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Frame = +3
Query: 282 NGEGDNFTETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWT 461
N + + + FSGSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 48 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 107
Query: 462 ITGNFGNILPIDW-TKSFSRKMHIPTLNLSDTKNSLTPDDEIHSSEDE-AVASDLDMHAL 635
+TGNFGNI P+D+ T S +KM L+ K+ + + +S+DE + +D+H +
Sbjct: 108 LTGNFGNIQPLDFGTSSICKKM-AAALDSDSLKDDASTRRSMTNSDDEDLLRQQMDVHQM 166
Query: 636 I---LGGLHQDHECPVKTADEVIQEIDDMMQ 719
I G E P +TAD+VI+EID+M+Q
Sbjct: 167 IGHHHGSTDTGGETPPQTADQVIEEIDEMLQ 197
>U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein.
Length = 379
Score = 128 bits (310), Expect = 3e-30
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Frame = +3
Query: 282 NGEGDNFTETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWT 461
N + + + FSGSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 42 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 101
Query: 462 ITGNFGNILPIDW-TKSFSRKMHIPTLNLSDTKNSLTPDDEIHSSEDE-AVASDLDMHAL 635
+TGNFGNI P+D+ T S +KM L+ K+ + + +S+DE + +D+H +
Sbjct: 102 LTGNFGNIQPLDFGTSSICKKM-AAALDSDSLKDDASTRRSMTNSDDEDLLRQQMDVHQM 160
Query: 636 I---LGGLHQDHECPVKTADEVIQEIDDMMQ 719
I G E P +TAD+VI+EID+M+Q
Sbjct: 161 IGHHHGSTDTGGETPPQTADQVIEEIDEMLQ 191
>U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein.
Length = 385
Score = 128 bits (310), Expect = 3e-30
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Frame = +3
Query: 282 NGEGDNFTETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWT 461
N + + + FSGSLEDLV FDEKI C ++E +APVQ+R+QEE+MNE Q WWT
Sbjct: 48 NSDEERLHDEFSGSLEDLVGNFDEKIAACLKDHEVTTADIAPVQIRTQEEVMNESQTWWT 107
Query: 462 ITGNFGNILPIDW-TKSFSRKMHIPTLNLSDTKNSLTPDDEIHSSEDE-AVASDLDMHAL 635
+TGNFGNI P+D+ T S +KM L+ K+ + + +S+DE + +D+H +
Sbjct: 108 LTGNFGNIQPLDFGTSSICKKM-AAALDSDSLKDDASTRRSMTNSDDEDLLRQQMDVHQM 166
Query: 636 I---LGGLHQDHECPVKTADEVIQEIDDMMQ 719
I G E P +TAD+VI+EID+M+Q
Sbjct: 167 IGHHHGSTDTGGETPPQTADQVIEEIDEMLQ 197
>AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 16 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.30
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Frame = +3
Query: 321 SLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWTITGNFGNILPIDW 500
+LE L+ EK+ + + E+N+ K+A R ++ + T NFG +P D+
Sbjct: 283 ALEALILKSYEKLRRKSNDLEDNLSKIASTLRRDSRQVFAKNLEAIVSTSNFGTSIPSDF 342
Query: 501 T-------KSFSRKMHIPTLNL---SDTKNSLTPDDEIHSSEDEAVASDL 620
+ F ++ +P L L + T+ P E+ S ED + A+DL
Sbjct: 343 SCKVELGPNRFVAQVFVPELGLDAKTTTRRHRIPYHEL-SREDLSDAADL 391
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 355 KSRNVSETMRRTSRSWRQCRFARRRKS*TNAKCGGQSLATSGTSYLLTGPNLSRGR 522
+SR+ S + RRTSR R R +RRR+ ++++ + +G+S+ + SR R
Sbjct: 44 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSNRHSRRR 99
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 355 KSRNVSETMRRTSRSWRQCRFARRRKS*TNAKCGGQSLATSGTSYLLTGPNLSRGR 522
+SR+ S + RRTSR R R +RRR+ ++++ + +G+S+ + SR R
Sbjct: 72 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSNRHSRRR 127
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 355 KSRNVSETMRRTSRSWRQCRFARRRKS*TNAKCGGQSLATSGTSYLLTGPNLSRGR 522
+SR+ S + RRTSR R R +RRR+ ++++ + +G+S+ + SR R
Sbjct: 130 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSNRHSRRR 185
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 355 KSRNVSETMRRTSRSWRQCRFARRRKS*TNAKCGGQSLATSGTSYLLTGPNLSRGR 522
+SR+ S + RRTSR R R +RRR+ ++++ + +G+S+ + SR R
Sbjct: 131 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSNRHSRRR 186
>Z78019-6|CAB01453.2| 370|Caenorhabditis elegans Hypothetical
protein ZK863.1 protein.
Length = 370
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 452 VVDNHWQLREHLTY*LDQIFLEEDAYSYIKF 544
VVD + LREH + ++FL+ DA YI +
Sbjct: 276 VVDEFYSLREHGNISIRRVFLQADAAVYILY 306
>Z81077-11|CAB03068.2| 244|Caenorhabditis elegans Hypothetical
protein F36A2.11 protein.
Length = 244
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 303 TETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWTITGNFGN 482
T+ F L+ FDE +TKC G Y ENV P + + T G+F +
Sbjct: 47 TQDFMNDLKHY-QEFDETVTKCAG-YLENV--FIPYSSKGSKPEEEAFTRLATALGDFKS 102
Query: 483 ILPIDWT---KSFSRKM 524
+P +T ++FS KM
Sbjct: 103 FVPQAYTAIFENFSTKM 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,023,179
Number of Sequences: 27780
Number of extensions: 324212
Number of successful extensions: 1302
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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