Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F22
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   1.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   1.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.8  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   9.5  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   9.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.5  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 646 PPRIRACMSKSEATASSSELWISSSGVNEF 557
           P R+ ACM   +A   S + W S  G+  F
Sbjct: 316 PARVMACMRSVDAKTISVQQWNSYWGILGF 345


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 646 PPRIRACMSKSEATASSSELWISSSGVNEF 557
           P R+ ACM   +A   S + W S  G+  F
Sbjct: 316 PARVMACMRSVDAKTISVQQWNSYWGILGF 345


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
 Frame = +3

Query: 315 SGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNECQMWWTITGNFGNILPI 494
           S  LE+ +   DE++ +      + + K    ++R+ E  ++ C+M+ +++  F +++  
Sbjct: 374 SKKLEESMRKLDEEMKRTDELLYQMIPKQVADRLRNGENPIDTCEMFDSVSILFSDVVTF 433

Query: 495 DWTKSFSRKMHIPT-LN-LSDTKNSLTPDDEIHSSEDEAVASDLDMHALILGGLHQDHEC 668
               S    M + + LN +    ++LT  + ++  E    A  +   A +    H D  C
Sbjct: 434 TEICSRITPMEVVSMLNAMYSLFDTLTERNRVYKVETIGDAYMVVSGAPVKENDHADRVC 493

Query: 669 PVKTADEVIQEIDDM 713
            +  A ++++ I D+
Sbjct: 494 DM--ALDMVEAITDL 506


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 354 KITKCFGNYEENVEKL 401
           K+ KCFG Y+   E L
Sbjct: 118 KLVKCFGKYKTMKEVL 133


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 354 KITKCFGNYEENVEKL 401
           K+ KCFG Y+   E L
Sbjct: 118 KLVKCFGKYKTMKEVL 133


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 650 SSGPRVPCQDC*RSDSRNRRYDARHSV 730
           + G R   +D  R   ++RRYD  H+V
Sbjct: 247 NDGERSCSRDRSREYKKDRRYDQLHNV 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,153
Number of Sequences: 438
Number of extensions: 3706
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)