Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F21
         (803 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   1.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.7  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 201 PGDDH-GDPAPAQDGEAVAPMAPKNR 127
           PG  H  +PAP  +G  V P AP+ R
Sbjct: 67  PGRSHPAEPAPGGNGPFVRPDAPQGR 92


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
 Frame = +2

Query: 398 HTCAYTLCYCTCSCPDSI-----NSWTRTLSE 478
           H C +  C C  +CP++      NSW+  + E
Sbjct: 781 HCCEFDACDCEMTCPNNCACYHDNSWSTNIVE 812


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +2

Query: 305 LNRSCCSTCRRIASIPC*HPQQPCDREPRHHHTCAYTLCYCTCSC 439
           +N S       + S PC HP  P  RE     + A T     C C
Sbjct: 481 INESLTVDIEMLCSCPCEHPSDPEYRERADECSNAGTYKCGICEC 525


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,444
Number of Sequences: 2352
Number of extensions: 12055
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)