Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F21
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.5  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   4.4  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   4.4  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   4.4  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   4.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.8  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   7.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 659 GSWSHCDYRSCYSMS 615
           G W H D R CY ++
Sbjct: 491 GKWPHEDKRGCYQLA 505


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 659 GSWSHCDYRSCYSMS 615
           G W H D R CY ++
Sbjct: 581 GKWPHEDKRGCYQLA 595


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 537 RQRVLDGKQLKEQPEPQIVSSES 469
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 537 RQRVLDGKQLKEQPEPQIVSSES 469
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 537 RQRVLDGKQLKEQPEPQIVSSES 469
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 537 RQRVLDGKQLKEQPEPQIVSSES 469
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 398 HTCAYTLCYCTCSCP 442
           H C +  C C  +CP
Sbjct: 748 HCCDFDACDCEMTCP 762


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 180 PAPAQDGEAVAPMAPKNRRPLRLKRITPP 94
           P P    EA +   P N RP+ + +  PP
Sbjct: 84  PHPRLRREAESEAEPGNNRPVYIPQPRPP 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,200
Number of Sequences: 438
Number of extensions: 3053
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)