Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F20
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   3.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.9  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 524
           QVAP   +   A    GH L  T+    Q +PQ   + H Q P
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 524
           QVAP   +   A    GH L  T+    Q +PQ   + H Q P
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 524
           QVAP   +   A    GH L  T+    Q +PQ   + H Q P
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 524
           QVAP   +   A    GH L  T+    Q +PQ   + H Q P
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 524
           QVAP   +   A    GH L  T+    Q +PQ   + H Q P
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 524
           QVAP   +   A    GH L  T+    Q +PQ   + H Q P
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 524
           QVAP   +   A    GH L  T+    Q +PQ   + H Q P
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 210 EQHNIFPLVVRQRNVLE-RSVDDGRGLELGSGFGQMQ 103
           +Q   +  ++ Q  ++  RS DD +G   GSG G  Q
Sbjct: 499 QQTQHYTNIISQEQIISWRSSDDAKGGGGGSGSGNNQ 535


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 405 QVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQ 503
           QVAP   +   A    GH L  T+    Q +PQ
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 94  NLPLHLPKPAPQF 132
           +LPLH P P P +
Sbjct: 157 SLPLHYPPPPPVY 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,103
Number of Sequences: 336
Number of extensions: 2897
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)