Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F20
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 136 1e-32
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 91 4e-24
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 91 7e-19
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 82 6e-16
06_01_0671 - 4899611-4899829,4900870-4901448 71 1e-12
02_01_0691 - 5167260-5167937 39 0.005
01_03_0105 + 12604125-12604583 33 0.21
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 31 1.1
03_03_0101 - 14431327-14432390,14432599-14432731 31 1.1
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 31 1.5
05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524 30 2.5
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 30 2.5
01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820 30 2.5
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496 30 2.5
03_03_0025 + 13848450-13849420,13850921-13851131,13851327-138514... 29 3.4
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 3.4
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 29 5.9
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 5.9
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 29 5.9
07_03_0575 - 19637277-19637681 28 7.8
02_03_0183 + 16106205-16106474 28 7.8
02_02_0154 + 7263707-7263782,7263908-7264248 28 7.8
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 136 bits (330), Expect = 1e-32
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = +1
Query: 328 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 507
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 508 ITINDLPVGRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAQEYF 669
TIN+L +GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K ++EYF
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/69 (63%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +1
Query: 121 APQFKATAVVNGAFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 297
AP F A AV + F ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+
Sbjct: 74 APDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNT 133
Query: 298 EVLGASTDS 324
E+LG S DS
Sbjct: 134 EILGVSIDS 142
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 91.5 bits (217), Expect(2) = 4e-24
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 433 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPA 609
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++ EVCPA
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPA 132
Query: 610 NWRPGAKTIKPDTKAAQEYF 669
W+PG K++KPD K ++EYF
Sbjct: 133 GWKPGEKSMKPDPKDSKEYF 152
Score = 38.3 bits (85), Expect(2) = 4e-24
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 232 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 324
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 91.5 bits (217), Expect = 7e-19
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Frame = +1
Query: 169 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 345
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 346 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD----EETG--IPFRGLFIIDDKQNLRQ 507
I + P+++D S + ++D + G +P R L I+ + ++
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKL 176
Query: 508 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 642
+ VGR+++E +R V A Q KH P NW+PG + + P
Sbjct: 177 SFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIP 221
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 81.8 bits (193), Expect = 6e-16
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Frame = +1
Query: 169 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 345
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG S D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 346 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD---EETG---IPFRGLFIIDDKQNLRQ 507
I + P+++D R ++D ++T +P R L I+ + ++
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKL 141
Query: 508 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQE 663
+ GR++ E LR A +H P NW+PG + + P + +E
Sbjct: 142 SFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEE 193
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = +1
Query: 169 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWI 348
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G S D +H +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195
Query: 349 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDL 525
+K+ L P L+SD+ +++ +++GV + G +P R +++D ++ I N
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVVQYIYNNQF 249
Query: 526 PVGRSVEETLRLVQA 570
+ + ETL+++Q+
Sbjct: 250 QPEKHIGETLKILQS 264
>02_01_0691 - 5167260-5167937
Length = 225
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Frame = +1
Query: 151 NGAFKDISLSDYK-GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STD 321
+G K +++++ G+ VLF P FT C + + F EKA E G + + S +
Sbjct: 81 DGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVN 140
Query: 322 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGV 438
F AW ++ GLG ++ L+SD + ++R GV
Sbjct: 141 DAFVMRAW----KESLGLGDADVLLLSDGNLELTRALGV 175
>01_03_0105 + 12604125-12604583
Length = 152
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 378 SHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPA 527
SH+H Q +P ++LR GR DG H RRQ Q + +PA
Sbjct: 62 SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 466 GRGCPSPRPALRSRERCGATCRL 398
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>03_03_0101 - 14431327-14432390,14432599-14432731
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 466 GRGCPSPRPALRSRERCGATCRL 398
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -3
Query: 552 GLLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVARDAVRLVAYQRNVHG 379
G+L +G+VVD L + ++DD E +L +H AR +R + R+V G
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGG 897
>05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524
Length = 427
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 466 GRGCPSPRPALRSRERCGATCRL 398
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 466 GRGCPSPRPALRSRERCGATCRL 398
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPRLAGLQRCGKSCRL 55
>01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820
Length = 357
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 466 GRGCPSPRPALRSRERCGATCRL 398
G GC S P L ERCG +CRL
Sbjct: 36 GVGCWSSVPKLAGLERCGKSCRL 58
>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
Length = 428
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 466 GRGCPSPRPALRSRERCGATCRL 398
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSTVPKLAGLQRCGKSCRL 55
>03_03_0025 +
13848450-13849420,13850921-13851131,13851327-13851459,
13851576-13851832
Length = 523
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 579 HGQARRGVPRQLEARRQDHQARHQGRAGVLRRRQLAHA 692
H Q RR +Q + R Q ARH+ +G RRR +A A
Sbjct: 217 HYQQRRQKQKQKQEREQA-TARHRSSSGAARRRSVAEA 253
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 358 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 516
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 504 PEVLLVVDDEESSEGDARLLVQHS 433
P V++VVDD+E EGD +L ++
Sbjct: 81 PAVVVVVDDDEEGEGDPQLCAPYA 104
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -1
Query: 470 PRKGMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQ- 294
P P +ST S D + RG+ G PP L C++C SV A +
Sbjct: 369 PSAAAPTGFASTDRSGGAGRDRAFARGICFGDPPPALS----PQYCLRCLSVAAKELADG 424
Query: 293 -PILRNSSAFSENAIISVGHTNVKS 222
P R ++ +++ S T+ S
Sbjct: 425 CPAKRRAAVWTDGCFASFADTSALS 449
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = -3
Query: 300 LAADLAELVRLLRERD---NLRRAHEREVQRIEEQHNIFPLVVRQRNVLERSVDD 145
L + ++VRLL+E++ NL+ E QRIE++ + ++ + + L+R V +
Sbjct: 329 LLKEKEDMVRLLKEKEGMINLKTVKAEETQRIEDEDK-YRIIKEKDDALDRLVKE 382
>07_03_0575 - 19637277-19637681
Length = 134
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -1
Query: 407 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAIISVGHT 234
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 391 PLISDKSHRISRDYGVLDEETGIP 462
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 461 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 297
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,423,336
Number of Sequences: 37544
Number of extensions: 379788
Number of successful extensions: 1475
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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