Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F17
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   2.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.2  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 235 IKDNLIMNCSFTLSLE-PETAFKRCDKC 315
           +KD++ M C +T  LE   T  K C  C
Sbjct: 49  VKDSVPMTCRYTFLLEWYHTLSKACYDC 76


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 155 IHFHLTD*EKLSVLTYNLSIKTVSCI 232
           + FHL + EK+  L  N   + +SC+
Sbjct: 154 LRFHLLELEKVHELCDNFCHRYISCL 179


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +2

Query: 14  TFFTTIFRNHKFPIFRCCYKSHDHYNLLV 100
           +FF   +   K  IF CC K     N  +
Sbjct: 91  SFFNQGYELSKQEIFNCCSKKSFRMNFAI 119


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 163  KVYLFSTIFFFKLSRL*TLSH 101
            K+Y F  + F+K+S+   L H
Sbjct: 1026 KIYFFYLVKFYKVSKSGELIH 1046


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 163 KVYLFSTIFFFKLSRL*TLSH 101
           K+Y F  + F+K+S+   L H
Sbjct: 307 KIYFFYLVKFYKVSKSGELIH 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,573
Number of Sequences: 336
Number of extensions: 1709
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)