Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F14
(864 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 32 0.89
X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican hom... 32 1.2
BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p pro... 32 1.2
BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p pro... 32 1.2
AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p pro... 32 1.2
AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-P... 32 1.2
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 30 3.6
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 30 3.6
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 30 3.6
AY071497-1|AAL49119.1| 1324|Drosophila melanogaster RE55745p pro... 30 4.7
AE014296-2071|AAF49978.2| 1324|Drosophila melanogaster CG6947-PA... 30 4.7
BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p pro... 29 8.3
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 29 8.3
AY118695-1|AAM50555.1| 446|Drosophila melanogaster AT18493p pro... 29 8.3
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 29 8.3
AE014296-1967|AAF50051.1| 566|Drosophila melanogaster CG11711-P... 29 8.3
AE014296-419|AAF47618.1| 446|Drosophila melanogaster CG15878-PA... 29 8.3
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 29 8.3
AE014134-2836|ABI31320.1| 353|Drosophila melanogaster CG5020-PG... 29 8.3
AE014134-2835|ABI31321.1| 390|Drosophila melanogaster CG5020-PF... 29 8.3
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 29 8.3
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 29 8.3
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 29 8.3
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 32.3 bits (70), Expect = 0.89
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +3
Query: 564 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYG-----RTG 728
SS P SPTY T+ +S T Y+ T S+YS +P Y+ SP + R G
Sbjct: 1837 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS-PSSPTFEESEDVRKG 1893
Query: 729 GRG 737
GRG
Sbjct: 1894 GRG 1896
>X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican
homeoprotein protein.
Length = 693
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 561 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 737
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p
protein.
Length = 693
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 561 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 737
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p
protein.
Length = 693
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 561 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 737
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p
protein.
Length = 325
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 561 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 737
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 239 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 295
>AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-PA
protein.
Length = 693
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 561 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 737
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 564 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYN 695
SS P SPTY T+ +S T Y+ T S+YS +P Y+
Sbjct: 356 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS 397
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 564 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYN 695
SS P SPTY T+ +S T Y+ T S+YS +P Y+
Sbjct: 1377 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS 1418
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 564 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYN 695
SS P SPTY T+ +S T Y+ T S+YS +P Y+
Sbjct: 1835 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS 1876
>AY071497-1|AAL49119.1| 1324|Drosophila melanogaster RE55745p protein.
Length = 1324
Score = 29.9 bits (64), Expect = 4.7
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -1
Query: 843 RSCHLQIFR*TKFFXRNSRSGHCSSRRVGCPARSGSLDHRSCRSLAIVPRC-NRACGYCS 667
R CH + F N+ SG+CS + VG D A C AC Y S
Sbjct: 1130 RRCHSRAVVDATFAAVNTTSGYCSCQDVGVSTFINCADEHVYEESA--GTCVVAACDYTS 1187
Query: 666 CFGRYSYICAES-SSLSGMSLCFG 598
C R ++ E+ ++ G C G
Sbjct: 1188 CLNRVAFEPFEAKNTTEGFCSCDG 1211
>AE014296-2071|AAF49978.2| 1324|Drosophila melanogaster CG6947-PA
protein.
Length = 1324
Score = 29.9 bits (64), Expect = 4.7
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -1
Query: 843 RSCHLQIFR*TKFFXRNSRSGHCSSRRVGCPARSGSLDHRSCRSLAIVPRC-NRACGYCS 667
R CH + F N+ SG+CS + VG D A C AC Y S
Sbjct: 1130 RRCHSRAVVDATFAAVNTTSGYCSCQDVGVSTFINCADEHVYEESA--GTCVVAACDYTS 1187
Query: 666 CFGRYSYICAES-SSLSGMSLCFG 598
C R ++ E+ ++ G C G
Sbjct: 1188 CLNRVAFEPFEAKNTTEGFCSCDG 1211
>BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p
protein.
Length = 806
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p
protein.
Length = 1689
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AY118695-1|AAM50555.1| 446|Drosophila melanogaster AT18493p
protein.
Length = 446
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 729 HRSCRSLAIVPRCNRACGYCSCFGRYSYICAESS 628
H+ C++LAI P + CG G YS + ESS
Sbjct: 188 HKQCKALAITP--DPMCGLFLHMGEYSMLMLESS 219
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AE014296-1967|AAF50051.1| 566|Drosophila melanogaster CG11711-PD,
isoform D protein.
Length = 566
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 582 PASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRGN 740
P +PT S + +T S H PG V + G+ GG+GN
Sbjct: 39 PQTPTASTPRPSSSHSSLSSTFAATFLHASSRHIPGRAVPRQNANGQNGGKGN 91
>AE014296-419|AAF47618.1| 446|Drosophila melanogaster CG15878-PA
protein.
Length = 446
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 729 HRSCRSLAIVPRCNRACGYCSCFGRYSYICAESS 628
H+ C++LAI P + CG G YS + ESS
Sbjct: 188 HKQCKALAITP--DPMCGLFLHMGEYSMLMLESS 219
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 221 LGETQFAPGNWC 232
>AE014134-2836|ABI31320.1| 353|Drosophila melanogaster CG5020-PG,
isoform G protein.
Length = 353
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 192 LGETQFAPGNWC 203
>AE014134-2835|ABI31321.1| 390|Drosophila melanogaster CG5020-PF,
isoform F protein.
Length = 390
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 192 LGETQFAPGNWC 203
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 246 LGETQFAPGNWC 257
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 468 LEETQFCPGNWC 433
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,585,206
Number of Sequences: 53049
Number of extensions: 681218
Number of successful extensions: 2458
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2457
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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