Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F14
         (864 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     27   0.29 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   2.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   8.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   8.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   8.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   8.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   8.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   8.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   8.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   8.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.4  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 26.6 bits (56), Expect = 0.29
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 146 IRIECY-SKNRKLNWNVRDSIFKFISQLRKSASDRPLM 36
           + +E Y  K  K N N+RDS+ K++  L++     P++
Sbjct: 84  VDLEFYLGKEWKKNLNLRDSVTKYLIHLKEIEDTEPIL 121


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 692 QRGTIARLRQDRWSREPXRAGHPTRRLEQCPLRELRXKN 808
           Q G + +L  D W     +  H T+R+  C L + R +N
Sbjct: 106 QLGYVQKL--DTWVPHELKEKHLTQRINSCDLLKKRNEN 142


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 636 PHKYTSTVQSNYSTHTPGYNVGQSPGY 716
           P ++   VQ+ Y  H PG+     P Y
Sbjct: 199 PQQHGLGVQNGYGRHLPGHAQMGRPSY 225


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 413  DHVARRSHQFPGQNWVSSRQRHFTGPSQLVRQPEFPHLH 529
            +H  R +   PG N +++     +G S+  R+P   H++
Sbjct: 1297 NHAYRDAVTVPGNNLIATNTTVSSGSSEDHRRPLSEHIY 1335


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 561 ISSDYAKPASPTYQNTSSFHS 623
           ISS+  +  S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 561 ISSDYAKPASPTYQNTSSFHS 623
           ISS+  +  S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 561 ISSDYAKPASPTYQNTSSFHS 623
           ISS+  +  S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 561 ISSDYAKPASPTYQNTSSFHS 623
           ISS+  +  S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 561 ISSDYAKPASPTYQNTSSFHS 623
           ISS+  +  S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 561 ISSDYAKPASPTYQNTSSFHS 623
           ISS+  +  S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 561 ISSDYAKPASPTYQNTSSFHS 623
           ISS+  +  S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 94  ILYLNLSPNFVKARATVLLWRDTQLNNM 11
           I+Y  L+ +F K    +L +R + LN+M
Sbjct: 425 IIYATLNRDFRKPFREILYFRCSNLNHM 452


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -1

Query: 219 LDTLEISHKFSKNTLKPFFLT*N 151
           LDT E  H F   T  PF  T N
Sbjct: 919 LDTYESVHSFPTETGLPFVYTFN 941


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 165 KTVLTCFSKICVISRECQ 218
           +++  C SK C I +EC+
Sbjct: 77  RSIDPCASKYCGIGKECE 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,999
Number of Sequences: 438
Number of extensions: 4647
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)