Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F11
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 106 PQQNPQDVQILRFDSNVEPDGYSFAYETSDGTSRQEEGKLDNP 234
           PQ    DV  +  DS+V P G  F YE        +    DNP
Sbjct: 651 PQNPDNDVHSIVDDSDVGPSGDCF-YENKFYRQEAQWTSSDNP 692


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 285 SYVSILSSNCQSCILGLWVVEFAFFLSGCT 196
           +YV+   +N +  I+  W+  F   ++ C+
Sbjct: 293 AYVTRTGANIKKLIVNTWISLFCVKVTNCS 322


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +1

Query: 55  LKYVTVACVLVALCSGAPQQNPQDVQILRFDSNVEPDGYSFAY 183
           LKY  +  + V    G    NP+DV+++  D+      + + +
Sbjct: 64  LKYYPIYKLDVCGTGGVNLLNPEDVELVLTDTKQNTKSFIYHF 106


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 280 RKHTVQ*LSELHSRTVGCRVC 218
           R+H++  L E + +   CR+C
Sbjct: 235 RRHSINLLEEDNQKPNVCRIC 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,024
Number of Sequences: 336
Number of extensions: 3094
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)