Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F10
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 39 0.004
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 38 0.008
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 37 0.019
10_05_0046 + 8516043-8516425,8517908-8518019,8518276-8518377,851... 35 0.078
01_06_1256 - 35775149-35775590,35775782-35775840 32 0.55
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 32 0.55
03_01_0227 - 1797353-1798519 31 1.3
01_05_0371 + 21533468-21533751,21534550-21534568 31 1.3
08_02_0432 - 17103230-17103322,17103403-17103542,17104950-171052... 30 1.7
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 29 3.9
03_05_0519 - 25131614-25134778 29 3.9
02_04_0097 - 19673312-19673836 29 3.9
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 29 5.1
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 29 5.1
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 28 6.7
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96... 28 6.7
09_06_0121 + 20975132-20975755,20976834-20976977,20977333-209774... 28 8.9
06_02_0315 - 14230234-14232771 28 8.9
05_07_0144 - 28007477-28008412 28 8.9
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 551 KNKVEYYVKWKGWKPKHNTWEPEENILD-PRLIQSFMK 661
KN + + V+WKG+ P ++TWEP + + D P I+ F++
Sbjct: 576 KNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVE 613
>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 542 RIRKNKVEYYVKWKGWKPKHNTWEPEENI 628
++ K+ + + V+WKG+ P H+TWEP E +
Sbjct: 950 KVSKHGLYFKVRWKGYGPHHDTWEPVEGL 978
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 548 RKNKVEYYVKWKGWKPKHNTWEPEENILD-PRLIQSFMKGEEVRRQ 682
R++ + + V+WKG+ + +TWEP EN+ D P I+ F++ E RR+
Sbjct: 430 REDGLYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQ-EGYRRK 474
>10_05_0046 +
8516043-8516425,8517908-8518019,8518276-8518377,
8518605-8518657,8518976-8519062,8519162-8519830,
8520154-8520214,8520295-8520342
Length = 504
Score = 34.7 bits (76), Expect = 0.078
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 581 KGWKPKHNTWEPEENI-LDPRLIQSFMKGEEVRRQGRKRERE 703
+GW NTWEP EN+ +I +F + R GRKR+R+
Sbjct: 218 RGWPESANTWEPLENLSACSDIIDAFEMRLQSPRPGRKRKRK 259
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 497 ELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEE 670
+L + + E I +RR+RK K++Y VKW G + + W+ L R+ K +E
Sbjct: 101 KLAEGYYEIEDIRRRRLRKGKLQYLVKW-GSQWEGGAWDLAAPELSGRIRTEDWKDQE 157
>01_06_1256 - 35775149-35775590,35775782-35775840
Length = 166
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 475 QTGDAQDGARRQRVRR*THHEKEN*KEQGGVLREMERVETEAQHVGTGGEHFGSSA 642
+ A++GA + R+ + KEQG L+EM V Q +G +H SSA
Sbjct: 93 EEASAEEGAAQAADRQGPGQPRGARKEQGSQLQEMSVVVPRRQELGATAQHLSSSA 148
>01_01_0272 -
2249662-2249721,2250110-2250335,2250419-2250615,
2250707-2250955,2251047-2251176,2251473-2251564,
2251735-2251855,2251940-2252028,2252149-2252271,
2252379-2252506,2253039-2253147,2253701-2254000
Length = 607
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 373 HSVQHCPQFKVGARTVLFMERRDTCSPLRIVVQTEVRGRSSPPAHPARSVPRKCRQSALR 194
H+ CP V+ RR+T + L V Q++V+G+ P P +P + ++
Sbjct: 138 HTTLTCPHRVAMEHGVIPASRRNTNTSLDYVFQSQVKGK-IPMVKPQFLIPNQLECGNIK 196
Query: 193 VHQRPLDIL 167
HQR + L
Sbjct: 197 FHQRRVTCL 205
>03_01_0227 - 1797353-1798519
Length = 388
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 551 KNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSF 655
+ K EY VKW + TWEP EN+ D L+Q F
Sbjct: 336 EGKWEYLVKWVDIEEA--TWEPAENV-DAELLQEF 367
>01_05_0371 + 21533468-21533751,21534550-21534568
Length = 100
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +1
Query: 490 QDGARRQRVRR*THHEKEN*KEQGGVLREMERVETEAQHVGTG-----GEHFGSSAHTEF 654
Q+G R++R RR EK + G E+ + +A H+G G GE S E
Sbjct: 10 QEGHRQERKRR----EKTEGQRWG----ELGHLHGKACHLGKGEGQGEGEEKRRSGGVE- 60
Query: 655 HERRGGPAPGSETRAGTLVRGARAXW 732
+RRG G R G ++R RA W
Sbjct: 61 EKRRGEGVGGEAARLGCVMRARRAGW 86
>08_02_0432 -
17103230-17103322,17103403-17103542,17104950-17105211,
17105391-17105495,17105496-17105558,17106876-17107022
Length = 269
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 565 VLREMERVETEAQHVGTG-GEHFGSSAHTEFHERRGGPAPGSETRAGTLVRGARAXWLR 738
V R+ + T G G G+ GS R G A ++ G V GARA W R
Sbjct: 99 VSRDTREMRTATAAAGYGHGDGGGSGGRARRRRRGSGLAAAGDSNGGGGVDGARARWQR 157
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 592 TEAQHVGTGGEHFGSSAHTEFHERRGGPAPGSET 693
TE +G+G + +A TE + GG APG ET
Sbjct: 119 TEDSQMGSGEKPAAEAAVTEAPPQEGGGAPGQET 152
>03_05_0519 - 25131614-25134778
Length = 1054
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 307 DTCSPLRIVVQTEVRGRSSPPAHPARSVPRKCRQSALRVHQRPLD 173
D C+ L I V VR RS+ + A +P+ R LR+ LD
Sbjct: 699 DPCTVLTIAVFDNVRYRSAEASGDAGKLPKDARIGKLRIRLSTLD 743
>02_04_0097 - 19673312-19673836
Length = 174
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 154 PWILTEYRAGVGELVARSVDIYEERCVRGAREESFFPL 267
PW+ G G LV R V I + G RE+ F L
Sbjct: 109 PWLYLRAHRGDGRLVLREVRIPSRELLHGRREDGRFKL 146
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 448 NPINVILSLHPINEAPQSKSHSSTRHSVQHCPQFKVGARTVLFMERRDTCSPLRIVVQTE 269
N I++ LS+ + E K H T+HS+ + Q A +V RD C P+ + + +
Sbjct: 4219 NIISLDLSISQVYEQVWRKHHGQTQHSLSNASQLSAAASSV-----RD-CPPMTVTYRLQ 4272
Query: 268 -VRGRSSPP 245
+ G ++ P
Sbjct: 4273 GLDGEATEP 4281
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 563 EYYVKWKGWKPKHNTWEPEE--NILDPRLIQSFM 658
++ VKW+ H+ W P E ++ DP +QS++
Sbjct: 386 QFLVKWQSLSHHHDCWVPLEWLHVSDPLRVQSYL 419
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 548 RKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMK 661
+K Y +KWKG H TW E L+ I +K
Sbjct: 86 KKPVKRYLIKWKGISHLHCTWVSESEYLETAKIYPRLK 123
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 524 ERIMK-RRIRKNKVEYYVKWKGWKPKHNTWEPEENI 628
+RI+ R+ + EYYVKWK TWE + +I
Sbjct: 154 DRILATRKSSTGEREYYVKWKELTYDECTWENDSDI 189
>02_01_0135 +
967172-967229,968316-968657,968936-969015,969063-969698,
969819-971527,971563-972514,972821-973273,974303-974497
Length = 1474
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 310 RDTCSPLRIVVQTEVRGRSSPPAHPARSVPRKCRQS 203
R C P++ V+Q E+ + + P H ++S PRK RQ+
Sbjct: 196 RTRCKPVQGVLQLEILRQIAMPKH-SQSEPRKPRQT 230
>09_06_0121 +
20975132-20975755,20976834-20976977,20977333-20977457,
20978090-20978194,20978755-20978989
Length = 410
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 589 ETEAQHVGTGGEHFGSSAHTEFHERRGGPAPGSETRAGTLVRGA 720
E H+G GGE G+ HE G S + G L+ G+
Sbjct: 139 EVHVYHLGDGGEKGGADVVLRGHEAEGYGLAWSPMKEGLLLSGS 182
>06_02_0315 - 14230234-14232771
Length = 845
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 192 TRSALCRHLRGTLRAGCAGGELLPL-TSVCTTIRSGE 299
T+ A CR G+L GC G++ PL T T G+
Sbjct: 393 TKEAGCRECDGSLHDGCEAGQVDPLETEAVETSECGD 429
>05_07_0144 - 28007477-28008412
Length = 311
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 737 RSXCARAPRTSVPARVSDPGAGPP 666
++ A PR +VP RV D A PP
Sbjct: 109 QAVAAHVPRAAVPQRVDDDDAAPP 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,109,674
Number of Sequences: 37544
Number of extensions: 498045
Number of successful extensions: 1600
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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