Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F10
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.3  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   5.6  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   9.8  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 283  VVQTEVRGRSSPPAHPARSVPRKCRQSA 200
            ++ + VR   + P H  RS PR+  +S+
Sbjct: 1346 LLSSNVRSLGNSPVHSGRSTPRELLESS 1373


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 245 RAPRTQRSS*MSTERATSSPTPARYS 168
           R PRT+RS  + T    SSP  A+ S
Sbjct: 35  RCPRTRRSEAVMTRSTPSSPRLAQAS 60


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 616 GGEHFGSSAHTEFHERRGGPAPGSETRA 699
           GG   GS  H+      GG A    TRA
Sbjct: 350 GGPGHGSGGHSNGSRANGGAATVGRTRA 377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,926
Number of Sequences: 2352
Number of extensions: 16617
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)