BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_F10 (738 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 70 2e-12 Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 58 5e-09 AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 58 5e-09 Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 43 3e-04 Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 43 3e-04 Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 43 3e-04 AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 43 3e-04 AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 43 3e-04 Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 41 0.001 U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 41 0.001 Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 40 0.002 U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 37 0.017 U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 29 2.6 AC026301-4|AAK68895.1| 347|Caenorhabditis elegans Hypothetical ... 29 2.6 Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 4.5 Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 4.5 AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 4.5 U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 28 6.0 U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 28 6.0 U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 28 6.0 AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical ... 28 6.0 AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 28 6.0 Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 28 7.9 AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 7.9 >L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chromodomain proteinprotein 1 protein. Length = 304 Score = 70.1 bits (164), Expect = 2e-12 Identities = 27/67 (40%), Positives = 44/67 (65%) Frame = +2 Query: 503 GDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682 G ++ E I++ R +K K E+Y+KW G+ HN+WEP+ENI+DP LI++F E R+ Sbjct: 4 GSELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAARKA 63 Query: 683 GRKRERE 703 K +++ Sbjct: 64 EIKAKKD 70 >Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical protein K08H2.6 protein. Length = 184 Score = 58.4 bits (135), Expect = 5e-09 Identities = 25/66 (37%), Positives = 40/66 (60%) Frame = +2 Query: 497 ELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVR 676 E +VF E+++ +R+ + EYY+KW+G+ +WEP EN+ R+IQ + K E + Sbjct: 31 ESSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEK-EAAK 89 Query: 677 RQGRKR 694 R RKR Sbjct: 90 RTTRKR 95 >AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin protein 1 homolog protein. Length = 184 Score = 58.4 bits (135), Expect = 5e-09 Identities = 25/66 (37%), Positives = 40/66 (60%) Frame = +2 Query: 497 ELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVR 676 E +VF E+++ +R+ + EYY+KW+G+ +WEP EN+ R+IQ + K E + Sbjct: 31 ESSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEK-EAAK 89 Query: 677 RQGRKR 694 R RKR Sbjct: 90 RTTRKR 95 >Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical protein K01G5.2c protein. Length = 303 Score = 42.7 bits (96), Expect = 3e-04 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682 D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+ Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74 Query: 683 GRKREREHSSVE 718 R+R E Sbjct: 75 KPIRKRHSQKPE 86 >Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical protein K01G5.2b protein. Length = 301 Score = 42.7 bits (96), Expect = 3e-04 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682 D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+ Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74 Query: 683 GRKREREHSSVE 718 R+R E Sbjct: 75 KPIRKRHSQKPE 86 >Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical protein K01G5.2a protein. Length = 175 Score = 42.7 bits (96), Expect = 3e-04 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682 D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+ Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74 Query: 683 GRKREREHSSVE 718 R+R E Sbjct: 75 KPIRKRHSQKPE 86 >AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain protein protein. Length = 175 Score = 42.7 bits (96), Expect = 3e-04 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682 D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+ Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74 Query: 683 GRKREREHSSVE 718 R+R E Sbjct: 75 KPIRKRHSQKPE 86 >AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain protein protein. Length = 301 Score = 42.7 bits (96), Expect = 3e-04 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682 D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+ Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74 Query: 683 GRKREREHSSVE 718 R+R E Sbjct: 75 KPIRKRHSQKPE 86 >Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical protein T09A5.8 protein. Length = 339 Score = 40.7 bits (91), Expect = 0.001 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +2 Query: 506 DSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENI 628 D +F E+I+ ++ N + V+W G+ +TWEPEE++ Sbjct: 21 DEIFEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61 >U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical protein T12E12.2 protein. Length = 891 Score = 40.7 bits (91), Expect = 0.001 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Frame = +2 Query: 506 DSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQG 685 ++ F+ + + R +K Y V W+G+ K TWEPEEN+ + +Q F + + Sbjct: 31 EAKFSPASVEYDKRRHSKYAYLVHWRGYDWKERTWEPEENLENCEELQKFKERNNMSLDH 90 Query: 686 RKRER--EHSSVERARXGS 736 E EHS+ R S Sbjct: 91 LTFEHHYEHSTWRRISLAS 109 >Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein H06O01.2 protein. Length = 1461 Score = 39.9 bits (89), Expect = 0.002 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%) Frame = +2 Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE-----NILDPRLIQSFMKGE-EVRRQGRKREREH 706 K + +++VKW GW HNTWE E N + +Q+++K + EV R ++E+ Sbjct: 234 KTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEY 291 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +2 Query: 563 EYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQGRKREREHSSVERAR 727 EY +KW G TWE +E ++ P I+++ R + K ++S+V R R Sbjct: 333 EYLIKWSGLPYSDCTWE-DEKMVAPEQIKAYYH----RIENLKSPNKNSNVLRKR 382 >U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical protein C29H12.5 protein. Length = 706 Score = 36.7 bits (81), Expect = 0.017 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +2 Query: 509 SVFAAERIMKRRIRKNKVEYY--VKWKGWKPKHNTWEPEENILDPRLIQSFMK 661 ++F+ ER + + + Y+ VKW G+ K TWEPE NI D + + K Sbjct: 74 AIFSEERFKRTKKPQLISNYFFLVKWLGYGNKEMTWEPESNIPDSVYLYEYKK 126 >U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical protein F32E10.2 protein. Length = 270 Score = 29.5 bits (63), Expect = 2.6 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +2 Query: 515 FAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPE--ENILD--PRLIQSFMKGEE 670 +A ER++ R K Y V+WKG+ H W E E LD L+ ++ K +E Sbjct: 87 YAVERVLAHRKVKGSPLYLVQWKGY--PHPVWNSEMWEEDLDNCKDLLAAYKKHQE 140 >AC026301-4|AAK68895.1| 347|Caenorhabditis elegans Hypothetical protein Y54F10BM.4 protein. Length = 347 Score = 29.5 bits (63), Expect = 2.6 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Frame = +3 Query: 252 ELLPLTSVCTTIRS-----GEHVSRRSIKRTVRAPTLNCGQC*TECRVEECDLDCGASLI 416 ELL L VCTT+++ G H + + V+ TL+ C + D+D GA++ Sbjct: 15 ELLKLRKVCTTLKTAVDKFGIHFNSIHFELDVKGFTLSLDD---GCFIYIGDVDGGAAVD 71 Query: 417 GCSDRITFIGLQCFLD 464 C RI F G + F+D Sbjct: 72 HCHRRIQFDG-ENFVD 86 >Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein T14G8.1 protein. Length = 1787 Score = 28.7 bits (61), Expect = 4.5 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622 K++ +Y VKWK +H TWE ++ Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537 >Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein T14G8.1 protein. Length = 1787 Score = 28.7 bits (61), Expect = 4.5 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622 K++ +Y VKWK +H TWE ++ Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537 >AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. Length = 1787 Score = 28.7 bits (61), Expect = 4.5 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622 K++ +Y VKWK +H TWE ++ Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537 >U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical protein ZK354.7 protein. Length = 224 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = +2 Query: 566 YYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQGRKREREHSSVER 721 YY+K K P + W+ + R+ SF KG+E + + ++E E+ Sbjct: 102 YYIKTKEDGPARDAWKNHKPDGMKRIYISFKKGDEKGDEKKDEKKEEKKEEK 153 >U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein W02C12.1 protein. Length = 1372 Score = 28.3 bits (60), Expect = 6.0 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +3 Query: 231 RAGCAGGELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEECD 392 R C GE L + VC + G + SR K+ V P + R E+C+ Sbjct: 1041 RDECPDGEQLSASGVCQPCQIGTYRSRGENKKCVACPPGTTTEATMSTRREQCN 1094 >U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like protein protein 15 protein. Length = 587 Score = 28.3 bits (60), Expect = 6.0 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -2 Query: 725 ARAPRTSVPARVSDPGAGPPRLS*NSV*AEDPKCSPPVPTCCASVSTLS 579 AR P + +P + P G L S A+ CS P+PT ++ S +S Sbjct: 54 ARRPPSRLPTPTT-PATGRASLPERSAMAKPASCSRPIPTMQSTASRIS 101 >AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical protein Y64G10A.6 protein. Length = 846 Score = 28.3 bits (60), Expect = 6.0 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%) Frame = +3 Query: 252 ELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEEC------DLDCGASL 413 +LL L S T R+ + V+++ K V+ G V +C D+ C ++ Sbjct: 46 DLLLLASEETPTRAPKPVTKQGKKNVVKVKKGGNGTVDDSPWVTDCSEPLNKDISCSVNI 105 Query: 414 IGCSDRI 434 IGCSD + Sbjct: 106 IGCSDNV 112 >AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like protein-15 protein. Length = 587 Score = 28.3 bits (60), Expect = 6.0 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -2 Query: 725 ARAPRTSVPARVSDPGAGPPRLS*NSV*AEDPKCSPPVPTCCASVSTLS 579 AR P + +P + P G L S A+ CS P+PT ++ S +S Sbjct: 54 ARRPPSRLPTPTT-PATGRASLPERSAMAKPASCSRPIPTMQSTASRIS 101 >Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein K04H4.2c protein. Length = 1446 Score = 27.9 bits (59), Expect = 7.9 Identities = 15/53 (28%), Positives = 22/53 (41%) Frame = +3 Query: 240 CAGGELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEECDLD 398 C G P T I+S + + T L G C + RV++CD+D Sbjct: 405 CFFGGCCPKTIELAVIKSQVLTMSKDNEHTKETEKLIIGDCEVDTRVKKCDID 457 >AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical protein ZC123.1 protein. Length = 730 Score = 27.9 bits (59), Expect = 7.9 Identities = 11/36 (30%), Positives = 14/36 (38%) Frame = -2 Query: 626 CSPPVPTCCASVSTLSISRSTPPCXXXXXXX*CVQR 519 C PP CC + + S PPC C +R Sbjct: 200 CCPPEQPCCPELKLDNCLASVPPCLRACPSCPCRKR 235 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,955,108 Number of Sequences: 27780 Number of extensions: 396619 Number of successful extensions: 1299 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1298 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1735436670 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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