Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F10
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 70 2e-12
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 58 5e-09
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 43 3e-04
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 43 3e-04
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 41 0.001
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 40 0.002
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 37 0.017
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC026301-4|AAK68895.1| 347|Caenorhabditis elegans Hypothetical ... 29 2.6
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 4.5
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 28 6.0
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 28 6.0
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 28 6.0
AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical ... 28 6.0
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 28 6.0
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 7.9
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +2
Query: 503 GDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
G ++ E I++ R +K K E+Y+KW G+ HN+WEP+ENI+DP LI++F E R+
Sbjct: 4 GSELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAARKA 63
Query: 683 GRKRERE 703
K +++
Sbjct: 64 EIKAKKD 70
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +2
Query: 497 ELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVR 676
E +VF E+++ +R+ + EYY+KW+G+ +WEP EN+ R+IQ + K E +
Sbjct: 31 ESSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEK-EAAK 89
Query: 677 RQGRKR 694
R RKR
Sbjct: 90 RTTRKR 95
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +2
Query: 497 ELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVR 676
E +VF E+++ +R+ + EYY+KW+G+ +WEP EN+ R+IQ + K E +
Sbjct: 31 ESSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEK-EAAK 89
Query: 677 RQGRKR 694
R RKR
Sbjct: 90 RTTRKR 95
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+
Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74
Query: 683 GRKREREHSSVE 718
R+R E
Sbjct: 75 KPIRKRHSQKPE 86
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+
Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74
Query: 683 GRKREREHSSVE 718
R+R E
Sbjct: 75 KPIRKRHSQKPE 86
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+
Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74
Query: 683 GRKREREHSSVE 718
R+R E
Sbjct: 75 KPIRKRHSQKPE 86
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+
Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74
Query: 683 GRKREREHSSVE 718
R+R E
Sbjct: 75 KPIRKRHSQKPE 86
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
D+VF E+++ +R K + E+ ++W+G+ ++WEP EN+ ++ F + E +R+
Sbjct: 16 DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74
Query: 683 GRKREREHSSVE 718
R+R E
Sbjct: 75 KPIRKRHSQKPE 86
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 506 DSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENI 628
D +F E+I+ ++ N + V+W G+ +TWEPEE++
Sbjct: 21 DEIFEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 506 DSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQG 685
++ F+ + + R +K Y V W+G+ K TWEPEEN+ + +Q F + +
Sbjct: 31 EAKFSPASVEYDKRRHSKYAYLVHWRGYDWKERTWEPEENLENCEELQKFKERNNMSLDH 90
Query: 686 RKRER--EHSSVERARXGS 736
E EHS+ R S
Sbjct: 91 LTFEHHYEHSTWRRISLAS 109
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +2
Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE-----NILDPRLIQSFMKGE-EVRRQGRKREREH 706
K + +++VKW GW HNTWE E N + +Q+++K + EV R ++E+
Sbjct: 234 KTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEY 291
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 563 EYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQGRKREREHSSVERAR 727
EY +KW G TWE +E ++ P I+++ R + K ++S+V R R
Sbjct: 333 EYLIKWSGLPYSDCTWE-DEKMVAPEQIKAYYH----RIENLKSPNKNSNVLRKR 382
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 509 SVFAAERIMKRRIRKNKVEYY--VKWKGWKPKHNTWEPEENILDPRLIQSFMK 661
++F+ ER + + + Y+ VKW G+ K TWEPE NI D + + K
Sbjct: 74 AIFSEERFKRTKKPQLISNYFFLVKWLGYGNKEMTWEPESNIPDSVYLYEYKK 126
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 515 FAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPE--ENILD--PRLIQSFMKGEE 670
+A ER++ R K Y V+WKG+ H W E E LD L+ ++ K +E
Sbjct: 87 YAVERVLAHRKVKGSPLYLVQWKGY--PHPVWNSEMWEEDLDNCKDLLAAYKKHQE 140
>AC026301-4|AAK68895.1| 347|Caenorhabditis elegans Hypothetical
protein Y54F10BM.4 protein.
Length = 347
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 252 ELLPLTSVCTTIRS-----GEHVSRRSIKRTVRAPTLNCGQC*TECRVEECDLDCGASLI 416
ELL L VCTT+++ G H + + V+ TL+ C + D+D GA++
Sbjct: 15 ELLKLRKVCTTLKTAVDKFGIHFNSIHFELDVKGFTLSLDD---GCFIYIGDVDGGAAVD 71
Query: 417 GCSDRITFIGLQCFLD 464
C RI F G + F+D
Sbjct: 72 HCHRRIQFDG-ENFVD 86
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622
K++ +Y VKWK +H TWE ++
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622
K++ +Y VKWK +H TWE ++
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622
K++ +Y VKWK +H TWE ++
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 566 YYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQGRKREREHSSVER 721
YY+K K P + W+ + R+ SF KG+E + + ++E E+
Sbjct: 102 YYIKTKEDGPARDAWKNHKPDGMKRIYISFKKGDEKGDEKKDEKKEEKKEEK 153
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
W02C12.1 protein.
Length = 1372
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 231 RAGCAGGELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEECD 392
R C GE L + VC + G + SR K+ V P + R E+C+
Sbjct: 1041 RDECPDGEQLSASGVCQPCQIGTYRSRGENKKCVACPPGTTTEATMSTRREQCN 1094
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 725 ARAPRTSVPARVSDPGAGPPRLS*NSV*AEDPKCSPPVPTCCASVSTLS 579
AR P + +P + P G L S A+ CS P+PT ++ S +S
Sbjct: 54 ARRPPSRLPTPTT-PATGRASLPERSAMAKPASCSRPIPTMQSTASRIS 101
>AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical
protein Y64G10A.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +3
Query: 252 ELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEEC------DLDCGASL 413
+LL L S T R+ + V+++ K V+ G V +C D+ C ++
Sbjct: 46 DLLLLASEETPTRAPKPVTKQGKKNVVKVKKGGNGTVDDSPWVTDCSEPLNKDISCSVNI 105
Query: 414 IGCSDRI 434
IGCSD +
Sbjct: 106 IGCSDNV 112
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 725 ARAPRTSVPARVSDPGAGPPRLS*NSV*AEDPKCSPPVPTCCASVSTLS 579
AR P + +P + P G L S A+ CS P+PT ++ S +S
Sbjct: 54 ARRPPSRLPTPTT-PATGRASLPERSAMAKPASCSRPIPTMQSTASRIS 101
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 240 CAGGELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEECDLD 398
C G P T I+S + + T L G C + RV++CD+D
Sbjct: 405 CFFGGCCPKTIELAVIKSQVLTMSKDNEHTKETEKLIIGDCEVDTRVKKCDID 457
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -2
Query: 626 CSPPVPTCCASVSTLSISRSTPPCXXXXXXX*CVQR 519
C PP CC + + S PPC C +R
Sbjct: 200 CCPPEQPCCPELKLDNCLASVPPCLRACPSCPCRKR 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,955,108
Number of Sequences: 27780
Number of extensions: 396619
Number of successful extensions: 1299
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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