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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F10
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans chrom...    70   2e-12
Z70210-6|CAA94152.1|  184|Caenorhabditis elegans Hypothetical pr...    58   5e-09
AF056580-1|AAC78602.1|  184|Caenorhabditis elegans heterochromat...    58   5e-09
Z92803-4|CAB54267.2|  303|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z92803-3|CAB07243.2|  301|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z92803-2|CAB07241.1|  175|Caenorhabditis elegans Hypothetical pr...    43   3e-04
AF123574-1|AAD21197.1|  175|Caenorhabditis elegans chromo-domain...    43   3e-04
AF123573-1|AAD21196.1|  301|Caenorhabditis elegans chromo-domain...    43   3e-04
Z36753-7|CAA85339.1|  339|Caenorhabditis elegans Hypothetical pr...    41   0.001
U61944-4|AAB03120.1|  891|Caenorhabditis elegans Hypothetical pr...    41   0.001
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr...    40   0.002
U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical pr...    37   0.017
U41992-6|AAA83357.1|  270|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AC026301-4|AAK68895.1|  347|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.      29   4.5  
U88172-4|AAB42259.1|  224|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U80450-5|AAB37830.1|  587|Caenorhabditis elegans Kinesin-like pr...    28   6.0  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    28   6.0  
AB032080-1|BAA92263.2|  587|Caenorhabditis elegans kinesin like ...    28   6.0  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    28   7.9  

>L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans
           chromodomain proteinprotein 1 protein.
          Length = 304

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 27/67 (40%), Positives = 44/67 (65%)
 Frame = +2

Query: 503 GDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
           G  ++  E I++ R +K K E+Y+KW G+   HN+WEP+ENI+DP LI++F   E  R+ 
Sbjct: 4   GSELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAARKA 63

Query: 683 GRKRERE 703
             K +++
Sbjct: 64  EIKAKKD 70


>Z70210-6|CAA94152.1|  184|Caenorhabditis elegans Hypothetical
           protein K08H2.6 protein.
          Length = 184

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 25/66 (37%), Positives = 40/66 (60%)
 Frame = +2

Query: 497 ELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVR 676
           E   +VF  E+++ +R+ +   EYY+KW+G+     +WEP EN+   R+IQ + K E  +
Sbjct: 31  ESSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEK-EAAK 89

Query: 677 RQGRKR 694
           R  RKR
Sbjct: 90  RTTRKR 95


>AF056580-1|AAC78602.1|  184|Caenorhabditis elegans heterochromatin
           protein 1 homolog protein.
          Length = 184

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 25/66 (37%), Positives = 40/66 (60%)
 Frame = +2

Query: 497 ELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVR 676
           E   +VF  E+++ +R+ +   EYY+KW+G+     +WEP EN+   R+IQ + K E  +
Sbjct: 31  ESSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEYEK-EAAK 89

Query: 677 RQGRKR 694
           R  RKR
Sbjct: 90  RTTRKR 95


>Z92803-4|CAB54267.2|  303|Caenorhabditis elegans Hypothetical
           protein K01G5.2c protein.
          Length = 303

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +2

Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
           D+VF  E+++ +R  K  + E+ ++W+G+    ++WEP EN+    ++  F + E  +R+
Sbjct: 16  DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74

Query: 683 GRKREREHSSVE 718
              R+R     E
Sbjct: 75  KPIRKRHSQKPE 86


>Z92803-3|CAB07243.2|  301|Caenorhabditis elegans Hypothetical
           protein K01G5.2b protein.
          Length = 301

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +2

Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
           D+VF  E+++ +R  K  + E+ ++W+G+    ++WEP EN+    ++  F + E  +R+
Sbjct: 16  DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74

Query: 683 GRKREREHSSVE 718
              R+R     E
Sbjct: 75  KPIRKRHSQKPE 86


>Z92803-2|CAB07241.1|  175|Caenorhabditis elegans Hypothetical
           protein K01G5.2a protein.
          Length = 175

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +2

Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
           D+VF  E+++ +R  K  + E+ ++W+G+    ++WEP EN+    ++  F + E  +R+
Sbjct: 16  DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74

Query: 683 GRKREREHSSVE 718
              R+R     E
Sbjct: 75  KPIRKRHSQKPE 86


>AF123574-1|AAD21197.1|  175|Caenorhabditis elegans chromo-domain
           protein protein.
          Length = 175

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +2

Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
           D+VF  E+++ +R  K  + E+ ++W+G+    ++WEP EN+    ++  F + E  +R+
Sbjct: 16  DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74

Query: 683 GRKREREHSSVE 718
              R+R     E
Sbjct: 75  KPIRKRHSQKPE 86


>AF123573-1|AAD21196.1|  301|Caenorhabditis elegans chromo-domain
           protein protein.
          Length = 301

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +2

Query: 506 DSVFAAERIMKRRIRK-NKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQ 682
           D+VF  E+++ +R  K  + E+ ++W+G+    ++WEP EN+    ++  F + E  +R+
Sbjct: 16  DNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFER-EFSKRE 74

Query: 683 GRKREREHSSVE 718
              R+R     E
Sbjct: 75  KPIRKRHSQKPE 86


>Z36753-7|CAA85339.1|  339|Caenorhabditis elegans Hypothetical
           protein T09A5.8 protein.
          Length = 339

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 506 DSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENI 628
           D +F  E+I+  ++  N +   V+W G+    +TWEPEE++
Sbjct: 21  DEIFEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61


>U61944-4|AAB03120.1|  891|Caenorhabditis elegans Hypothetical
           protein T12E12.2 protein.
          Length = 891

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 506 DSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQG 685
           ++ F+   +   + R +K  Y V W+G+  K  TWEPEEN+ +   +Q F +   +    
Sbjct: 31  EAKFSPASVEYDKRRHSKYAYLVHWRGYDWKERTWEPEENLENCEELQKFKERNNMSLDH 90

Query: 686 RKRER--EHSSVERARXGS 736
              E   EHS+  R    S
Sbjct: 91  LTFEHHYEHSTWRRISLAS 109


>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
           protein H06O01.2 protein.
          Length = 1461

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = +2

Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE-----NILDPRLIQSFMKGE-EVRRQGRKREREH 706
           K + +++VKW GW   HNTWE E      N    + +Q+++K + EV    R  ++E+
Sbjct: 234 KTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEY 291



 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 563 EYYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQGRKREREHSSVERAR 727
           EY +KW G      TWE +E ++ P  I+++      R +  K   ++S+V R R
Sbjct: 333 EYLIKWSGLPYSDCTWE-DEKMVAPEQIKAYYH----RIENLKSPNKNSNVLRKR 382


>U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical
           protein C29H12.5 protein.
          Length = 706

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +2

Query: 509 SVFAAERIMKRRIRKNKVEYY--VKWKGWKPKHNTWEPEENILDPRLIQSFMK 661
           ++F+ ER  + +  +    Y+  VKW G+  K  TWEPE NI D   +  + K
Sbjct: 74  AIFSEERFKRTKKPQLISNYFFLVKWLGYGNKEMTWEPESNIPDSVYLYEYKK 126


>U41992-6|AAA83357.1|  270|Caenorhabditis elegans Hypothetical
           protein F32E10.2 protein.
          Length = 270

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +2

Query: 515 FAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPE--ENILD--PRLIQSFMKGEE 670
           +A ER++  R  K    Y V+WKG+   H  W  E  E  LD    L+ ++ K +E
Sbjct: 87  YAVERVLAHRKVKGSPLYLVQWKGY--PHPVWNSEMWEEDLDNCKDLLAAYKKHQE 140


>AC026301-4|AAK68895.1|  347|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.4 protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
 Frame = +3

Query: 252 ELLPLTSVCTTIRS-----GEHVSRRSIKRTVRAPTLNCGQC*TECRVEECDLDCGASLI 416
           ELL L  VCTT+++     G H +    +  V+  TL+       C +   D+D GA++ 
Sbjct: 15  ELLKLRKVCTTLKTAVDKFGIHFNSIHFELDVKGFTLSLDD---GCFIYIGDVDGGAAVD 71

Query: 417 GCSDRITFIGLQCFLD 464
            C  RI F G + F+D
Sbjct: 72  HCHRRIQFDG-ENFVD 86


>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
           protein T14G8.1 protein.
          Length = 1787

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622
           K++ +Y VKWK    +H TWE ++
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537


>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
           protein T14G8.1 protein.
          Length = 1787

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622
           K++ +Y VKWK    +H TWE ++
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537


>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
          Length = 1787

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 551 KNKVEYYVKWKGWKPKHNTWEPEE 622
           K++ +Y VKWK    +H TWE ++
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDD 537


>U88172-4|AAB42259.1|  224|Caenorhabditis elegans Hypothetical
           protein ZK354.7 protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 566 YYVKWKGWKPKHNTWEPEENILDPRLIQSFMKGEEVRRQGRKREREHSSVER 721
           YY+K K   P  + W+  +     R+  SF KG+E   + +  ++E    E+
Sbjct: 102 YYIKTKEDGPARDAWKNHKPDGMKRIYISFKKGDEKGDEKKDEKKEEKKEEK 153


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +3

Query: 231  RAGCAGGELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEECD 392
            R  C  GE L  + VC   + G + SR   K+ V  P     +     R E+C+
Sbjct: 1041 RDECPDGEQLSASGVCQPCQIGTYRSRGENKKCVACPPGTTTEATMSTRREQCN 1094


>U80450-5|AAB37830.1|  587|Caenorhabditis elegans Kinesin-like
           protein protein 15 protein.
          Length = 587

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 725 ARAPRTSVPARVSDPGAGPPRLS*NSV*AEDPKCSPPVPTCCASVSTLS 579
           AR P + +P   + P  G   L   S  A+   CS P+PT  ++ S +S
Sbjct: 54  ARRPPSRLPTPTT-PATGRASLPERSAMAKPASCSRPIPTMQSTASRIS 101


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 252 ELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEEC------DLDCGASL 413
           +LL L S  T  R+ + V+++  K  V+      G       V +C      D+ C  ++
Sbjct: 46  DLLLLASEETPTRAPKPVTKQGKKNVVKVKKGGNGTVDDSPWVTDCSEPLNKDISCSVNI 105

Query: 414 IGCSDRI 434
           IGCSD +
Sbjct: 106 IGCSDNV 112


>AB032080-1|BAA92263.2|  587|Caenorhabditis elegans kinesin like
           protein-15 protein.
          Length = 587

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 725 ARAPRTSVPARVSDPGAGPPRLS*NSV*AEDPKCSPPVPTCCASVSTLS 579
           AR P + +P   + P  G   L   S  A+   CS P+PT  ++ S +S
Sbjct: 54  ARRPPSRLPTPTT-PATGRASLPERSAMAKPASCSRPIPTMQSTASRIS 101


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
           protein K04H4.2c protein.
          Length = 1446

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +3

Query: 240 CAGGELLPLTSVCTTIRSGEHVSRRSIKRTVRAPTLNCGQC*TECRVEECDLD 398
           C  G   P T     I+S      +  + T     L  G C  + RV++CD+D
Sbjct: 405 CFFGGCCPKTIELAVIKSQVLTMSKDNEHTKETEKLIIGDCEVDTRVKKCDID 457


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
           protein ZC123.1 protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = -2

Query: 626 CSPPVPTCCASVSTLSISRSTPPCXXXXXXX*CVQR 519
           C PP   CC  +   +   S PPC        C +R
Sbjct: 200 CCPPEQPCCPELKLDNCLASVPPCLRACPSCPCRKR 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,955,108
Number of Sequences: 27780
Number of extensions: 396619
Number of successful extensions: 1299
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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