Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F10
(738 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 46 5e-07
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.7
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.7
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.7
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.2
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 5.2
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 5.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.1
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 45.6 bits (103), Expect = 5e-07
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 476 KLGMHKMELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWEPEENILD 634
K GM + ++ E+I+ ++ K Y +KWK W K+NTWEP N+++
Sbjct: 231 KNGMKTLLSETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTWEPISNLIN 283
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 705 CSRSRFRPWRRTSSPFMKLC 646
CSR R R +R+ + KLC
Sbjct: 4 CSRDRNREYRKKDRQYEKLC 23
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 705 CSRSRFRPWRRTSSPFMKLC 646
CSR R R +R+ + KLC
Sbjct: 4 CSRDRNREYRKKDRQYEKLC 23
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 705 CSRSRFRPWRRTSSPFMKLC 646
CSR R R +R+ + KLC
Sbjct: 4 CSRDRNREYRKKDRQYEKLC 23
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 705 CSRSRFRPWRRTSSPFMKLC 646
CSR R R +R+ + KLC
Sbjct: 4 CSRDRNREYRKKDRQYEKLC 23
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 6 GR*VISRACCW*VAFARGPGET 71
GR V+ CCW GPG +
Sbjct: 4 GRHVVMSCCCWCCDNLGGPGSS 25
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 382 KNAIWIAVPH*LDAVTGSHLLDCSVFWITTDQT 480
K+A+W VPH ++ +HLL +F +T+ T
Sbjct: 97 KDALWSLVPHMAWQLSTAHLL-AQLFLKSTEVT 128
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = +2
Query: 380 RRMRFGLRCLINWMQ*QDHIYWIAVFFGLPPIKLGMHKME 499
+R+R L + + H +W+ + F P ++ H E
Sbjct: 492 QRLRKELDSKTGGVNLKGHAHWLTLHFKDPKVESAFHNAE 531
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 452 VFFGLPPIKLGMHKMELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWE 613
V + + P L M L D VF + I K ++YY K+K PK+ T E
Sbjct: 396 VKYQVVPSALQMWSTSLRDPVFFS-------IYKTILDYYHKYKENLPKYTTEE 442
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 452 VFFGLPPIKLGMHKMELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWE 613
V + + P L M L D VF + I K ++YY K+K PK+ T E
Sbjct: 396 VKYQVVPSALQMWSTSLRDPVFFS-------IYKTILDYYHKYKENLPKYTTEE 442
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 536 KRRIRKNKVEYYVKWKGWKPKHNTWEPEE 622
K + +E ++K G+ K +TW P E
Sbjct: 92 KLHVSHTCIENHLKQLGYVQKLDTWVPHE 120
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.2 bits (45), Expect = 5.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 452 VFFGLPPIKLGMHKMELGDSVFAAERIMKRRIRKNKVEYYVKWKGWKPKHNTWE 613
V + + P L M L D VF + I K ++YY K+K PK+ T E
Sbjct: 22 VKYQVVPSALQMWSTSLRDPVFFS-------IYKTILDYYHKYKENLPKYTTEE 68
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 627 MFSSGSHVLCFGFHPF 580
+F + SH+LC G+ F
Sbjct: 330 LFKAMSHMLCIGYGRF 345
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 627 MFSSGSHVLCFGFHPF 580
+F + SH+LC G+ F
Sbjct: 298 LFKAMSHMLCIGYGRF 313
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,849
Number of Sequences: 438
Number of extensions: 5297
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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