Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F08
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 33 0.28
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 1.1
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 31 1.1
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 31 1.1
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 30 2.0
U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 29 2.6
U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 29 2.6
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.6
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 6.1
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 28 6.1
U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein. 28 6.1
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 28 6.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 8.1
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 32.7 bits (71), Expect = 0.28
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +2
Query: 23 SETRTITRALTMVYESDFYTTRRPYRSTYSVTRSTLGDWEKVPFV-PRPSLVPDPVTAF- 196
++ TIT +L+ VY + + R SV L ++ + P + P T
Sbjct: 140 NKEETIT-SLSEVYPTGSFVQIIEVRDQGSVLELVLSAHRRIRALEPIDEITPKNETPLN 198
Query: 197 GRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVL--STVGQRER 361
GRR + AS P+T PP +A +AP +S E+ + S G++++
Sbjct: 199 GRRARGKRAASATSPLTPPPSPPPLAPSVASVAPEISATEEKEEKTTPPSATGEKQK 255
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.66
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +2
Query: 158 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRAR-- 331
PRP + D R P AS ++ IPPK ESK+ P+ P + + ++RA
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKPKQAVQLKSRAARD 503
Query: 332 ----VLSTVGQRERAFEAD 376
T GQR A E +
Sbjct: 504 EPGGGAQTAGQRRAAAELE 522
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 31.5 bits (68), Expect = 0.66
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +2
Query: 158 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRAR-- 331
PRP + D R P AS ++ IPPK ESK+ P+ P + + ++RA
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKPKQAVQLKSRAARD 503
Query: 332 ----VLSTVGQRERAFEAD 376
T GQR A E +
Sbjct: 504 EPGGGAQTAGQRRAAAELE 522
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 212 PGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARV--LSTVGQRERAFEADPL 382
P T AS L+P P PE + P P P+ +T V T G+++ EA PL
Sbjct: 628 PVTEASPLNPQPPPPPSPSPEPEPEPKPPVTPPKNETVDPVHENGTSGEKDGTPEAQPL 686
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 396 SRGVPRGSASNARSRCP--TVESTRARVCSRGDT*GARGANFDSGFGGMFCLV 244
S+G +GS R CP + +S + CS+ D +N SGFG MF +V
Sbjct: 456 SKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPDPTLLIDSNKSSGFGLMFWIV 508
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 396 SRGVPRGSASNARSRCP--TVESTRARVCSRGDT*GARGANFDSGFGGMFCLV 244
S+G +GS R CP + +S + CS+ D +N SGFG MF +V
Sbjct: 828 SKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPDPTLLIDSNKSSGFGLMFWIV 880
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 86 RRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPD 181
R P+ S+Y T S+LG WE +PF+ P++ D
Sbjct: 301 RYPFYSSYDST-SSLGFWEMLPFLFVPAIFDD 331
>U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated
protein 40 protein.
Length = 1415
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 596 DVARSGRGPPPRSAAASTLASESDTRQRTTLPPRSPLST 480
D R+ RG PP S+AA+ L S + T PP S S+
Sbjct: 1260 DGYRTLRGTPPNSSAANALRSFTQLAGATPPPPHSAASS 1298
>U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein.
Length = 1415
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 596 DVARSGRGPPPRSAAASTLASESDTRQRTTLPPRSPLST 480
D R+ RG PP S+AA+ L S + T PP S S+
Sbjct: 1260 DGYRTLRGTPPNSSAANALRSFTQLAGATPPPPHSAASS 1298
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 550 AAALRGGGPRPDRATSCRGAVLVLV 624
+ L GGG RP++ +CRG V +++
Sbjct: 193 SVCLYGGGSRPEQVEACRGGVEIVI 217
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 158 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAP 298
PRP + D R P AS ++ IPPK ESK+ P+ P
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKP 490
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 158 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAP 298
PRP + D R P AS ++ IPPK ESK+ P+ P
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKP 490
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 158 PRPSLVPDPVTAFGRRTKP-GTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQ 319
P PS + KP GT+ P + PP+P+ ++P+ P P +Q
Sbjct: 200 PIPSPSASSIAEESLDDKPSGTKMPAQPPPQQHPPPPQPQQIMSPMPPQAPPSQQ 254
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2
Query: 239 PVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADPLGTPRDHMDVLLA 418
PV +Q PP+ AP+A P + +A+ V Q +A P + +
Sbjct: 185 PVVQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVV 244
Query: 419 QAHGRPL 439
QA +P+
Sbjct: 245 QAPPKPI 251
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 563 RSAAASTLASESDTRQRTTLPPRSPLSTWRSYCSK 459
R+ + T+A E+D R + PPRS ++Y S+
Sbjct: 97 RTNQSGTIAQETDNRNASNFPPRSTTRRGQTYESR 131
>U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein.
Length = 562
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 423 AWASSTSMWSRGVPRGSASNARSRCPTVESTRARVCSRGDT*GARGAN 280
A+ W R + + N RSR + + ARVC + D GAR AN
Sbjct: 230 AYKEHVYFWFREIASEAIDNNRSRSFQIYARVARVC-KNDKGGARPAN 276
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 28.3 bits (60), Expect = 6.1
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +2
Query: 149 PFVPRPSLVPDPVTAFGRRTKPGTRAS--VLDPVTKQNIPPKPESKLAPLAPYVSPREQT 322
P PRPS +FG P T S L P + + + + +P P +
Sbjct: 30 PTSPRPS----SSDSFGPSAAPSTSLSPPFLSPSYSMDYIIEAMTSSSSTSPVPPP--VS 83
Query: 323 RARVLSTVGQRERAFEADPLGTPRDHMDVLLAQAHGRPLHAAHRH 457
+R ++ V R A P+G R H Q + LHA H H
Sbjct: 84 ASRPVAPVVARVEGLRAVPVGHRRQHSSPGHLQQFQQELHARHHH 128
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 241 GVQHGGARARLGAPPEGRHRVGHETRPRHERH 146
GV HG A GA G H H P HE H
Sbjct: 610 GVHHGHHGAGYGAH-HGHHGAHHHHAPHHEHH 640
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,121,829
Number of Sequences: 27780
Number of extensions: 273980
Number of successful extensions: 1126
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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