Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F08
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1) domain... 32 0.35
At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1) domain... 32 0.35
At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1) domain... 32 0.35
At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1) domain... 32 0.35
At1g24220.1 68414.m03054 paired amphipathic helix repeat-contain... 31 0.61
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 30 1.9
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 30 1.9
At5g22450.1 68418.m02618 expressed protein 29 2.5
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 29 2.5
At2g47070.1 68415.m05881 squamosa promoter-binding protein-like ... 29 2.5
At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transfera... 29 3.3
At2g25870.1 68415.m03105 haloacid dehalogenase-like hydrolase fa... 29 3.3
At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C... 29 3.3
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 29 4.3
At3g25250.1 68416.m03154 protein kinase family protein contains ... 28 5.7
At5g53440.1 68418.m06641 expressed protein 28 7.6
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 28 7.6
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 28 7.6
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 28 7.6
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 7.6
>At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 590 ARSGRGPPPRSAAASTLASESDTRQRTTLPPRSP 489
A S + PPP + +ST S S T T+ PRSP
Sbjct: 119 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPRSP 152
>At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 218
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 590 ARSGRGPPPRSAAASTLASESDTRQRTTLPPRSP 489
A S + PPP + +ST S S T T+ PRSP
Sbjct: 141 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPRSP 174
>At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 590 ARSGRGPPPRSAAASTLASESDTRQRTTLPPRSP 489
A S + PPP + +ST S S T T+ PRSP
Sbjct: 119 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPRSP 152
>At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 590 ARSGRGPPPRSAAASTLASESDTRQRTTLPPRSP 489
A S + PPP + +ST S S T T+ PRSP
Sbjct: 119 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPRSP 152
>At1g24220.1 68414.m03054 paired amphipathic helix repeat-containing
protein weak similarity to transcription co-repressor
Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 744
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +2
Query: 200 RRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADP 379
+ T P + + P + IPPK + A PRE R R++ + ++ E
Sbjct: 587 KATIPPKSSRTISPKANRTIPPKSKKTFPREAKRTIPREANRNRIMPSEAKKTIHPEDKR 646
Query: 380 LGTPRDHMDVLLAQA 424
P DH+ + +A
Sbjct: 647 TTRPVDHLAFFIPKA 661
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +2
Query: 149 PFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSP 310
P P P P P T + P V P K++ P P L P AP SP
Sbjct: 90 PPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAPKKSP 143
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 79 HDASALQVHLQRDAVDARGLGEGAVRAAAESRARPGDG 192
HD + H RD + A G G+ A+R +S+ DG
Sbjct: 266 HDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSVDG 303
>At5g22450.1 68418.m02618 expressed protein
Length = 1180
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 201 RPKAVT-GSGTRLGRGTNGTFSQSPSVDRV 115
RPK + GSG L RGT G S +P++ +V
Sbjct: 22 RPKGIMLGSGNNLSRGTIGLSSDTPNLSQV 51
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 98 RSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAF---GRRTKPGTRASVLDPVTKQNIPPK 268
RS+ S RS + D +K + S V + V + ++ T A++ DPV +Q+ P
Sbjct: 477 RSSSSCLRSEVKDEKKTDTLDTESCVKELVESSMVGAIESRSSTHATIEDPVCEQSPSPS 536
Query: 269 PESKLAPLAPYVSP 310
P +P +P SP
Sbjct: 537 PSPSPSP-SPSPSP 549
>At2g47070.1 68415.m05881 squamosa promoter-binding protein-like 1
(SPL1) identical to squamosa promoter binding
protein-like 1 [Arabidopsis thaliana] GI:5931655;
contains Pfam profile PF03110: SBP domain
Length = 881
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 417 ASSTSMWSRGVPRGSASNARSRCPTVESTRAR--VCSRGDT*GARGANFDSGFGGMF 253
A+ T+ + P G++SN+ S C + + R V +GDT GA N + G+F
Sbjct: 39 ATQTTRGRQFFPLGNSSNSSSSCSDEGNDKKRRAVAIQGDTNGALTLNLNGESDGLF 95
>At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transferase,
putative similar to O-GlcNAc transferase, Homo sapiens
[SP|O15294], Rattus norvegicus [SP|P56558]; contains
Pfam profile PF00515: TPR Domain; identical to cDNA
GI:18139886
Length = 977
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 160 RHERHLLPVPERRPRHAVGGPVGPTRRVEVTLVYHG*CSCYRSGF 26
R + ++ +P +P HA+ P+ P +E++ Y CS S F
Sbjct: 526 RRQINMSVLPSVQPFHAIAYPIDPILALEISRKYAAHCSIIASRF 570
>At2g25870.1 68415.m03105 haloacid dehalogenase-like hydrolase
family protein contains Pfam profiles PF00702: haloacid
dehalogenase-like hydrolase, PF02130: Uncharacterized
protein family UPF0054
Length = 584
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 95 YRSTYSVTRSTLGDWEKVPFVP 160
+R ++ RST+GDW K+P P
Sbjct: 58 FRRSFHALRSTVGDWRKLPKPP 79
>At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C GI:2582800
from [Medicago sativa]
Length = 380
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 149 PFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRA 328
PF R L P FG + PG+ P T +IP P AP++ +PRE++RA
Sbjct: 58 PFCLR-LLKPPAKLGFGSDSGPGSILKRKRPTTL-DIPVAPVGIAAPISNADTPREESRA 115
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 79 HDASALQVHLQRDAVDARGLGEGAVRAAAESRARPGDG 192
HD + VH RD V A G G+ ++ +S + DG
Sbjct: 242 HDRTIYSVHWSRDGVIASGAGDDTIQLFVDSDSDSVDG 279
>At3g25250.1 68416.m03154 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 421
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 134 DWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASV 232
DWEKV V RP +P P + T T+ V
Sbjct: 333 DWEKVILVSRPPYIPAPDDGGDKGTDVNTKMDV 365
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 254 NIPPKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADPLGTPRDHM 403
+ PP+PES+ +P V PRE+ ++T G+ +R +G + +M
Sbjct: 596 SFPPRPESRSGVSSPRVGPREEDNR--VNTGGRYKRGGVDAMMGRGQSNM 643
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.9 bits (59), Expect = 7.6
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 20 ASETRTITRALTMVYESDFYTTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFG 199
AS I +L + +D+Y P T V + TL P V +P+L P PV
Sbjct: 6 ASFAICILLSLATIATADYYAPSSPPVYTSPVNKPTLPPPVYTPPVHKPTL-PPPV---- 60
Query: 200 RRTKPGTRASVLDPV-TKQNIPP 265
T P + ++ PV TK +PP
Sbjct: 61 -YTPPVHKPTLSPPVYTKPTLPP 82
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 239 PVTKQNIPPKPESKLAPLAPYVSPRE 316
PV + ++PPKP S L P++ P +
Sbjct: 167 PVCRASLPPKPGSDQNSLYPFIRPHD 192
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = -2
Query: 250 FGDGVQHGGARARLGAPPEGRHRVGHETRPRHERHLLPVPERRPRHAVGGPVGPTRRVEV 71
F + V H L P H H P H H P P P PV P + V
Sbjct: 23 FTEEVNHKTQTPSLAPAPAPYHHGHHHPHPPHHHH--PHPHPHPHPPAKSPVKPPVKAPV 80
Query: 70 T 68
+
Sbjct: 81 S 81
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +2
Query: 149 PFVPRPSL-VPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAP 289
P P+P P PV G KP + PPKPE+K P
Sbjct: 99 PSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKPENKTIP 146
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,510,087
Number of Sequences: 28952
Number of extensions: 254180
Number of successful extensions: 1130
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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