Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F07
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011457-1|AAR99115.1|  323|Drosophila melanogaster RE31995p pro...    29   6.1  
BT003627-1|AAO39631.1|  295|Drosophila melanogaster AT31631p pro...    29   6.1  
AE014297-4303|AAF56843.1|  323|Drosophila melanogaster CG14517-P...    29   6.1  

>BT011457-1|AAR99115.1|  323|Drosophila melanogaster RE31995p
           protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 6   RPMGGAAGFSTSRVVPLREXWEQVKALLKXVLHILYEYLKXFEV 137
           RP G  A +ST+ +VP R+  EQ+ A L  + + L + L  + +
Sbjct: 101 RPEGCQARYSTAIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRI 144


>BT003627-1|AAO39631.1|  295|Drosophila melanogaster AT31631p
           protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 6   RPMGGAAGFSTSRVVPLREXWEQVKALLKXVLHILYEYLKXFEV 137
           RP G  A +ST+ +VP R+  EQ+ A L  + + L + L  + +
Sbjct: 73  RPEGCQARYSTAIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRI 116


>AE014297-4303|AAF56843.1|  323|Drosophila melanogaster CG14517-PA
           protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 6   RPMGGAAGFSTSRVVPLREXWEQVKALLKXVLHILYEYLKXFEV 137
           RP G  A +ST+ +VP R+  EQ+ A L  + + L + L  + +
Sbjct: 101 RPEGCQARYSTAIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRI 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,522,716
Number of Sequences: 53049
Number of extensions: 581544
Number of successful extensions: 864
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)