Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F02
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 46 4e-05
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 46 4e-05
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 41 8e-04
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical ... 32 0.48
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr... 29 2.6
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/71 (42%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 524 GGVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIXG 697
GGV K G G V KP G V V+Y G L+ K + +G F F LG VI G
Sbjct: 14 GGVLKLIKKEGQG-VVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKG 72
Query: 698 WDVGVSGMKVG 730
WD+GV+ M G
Sbjct: 73 WDLGVATMTKG 83
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 527 GVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIXGW 700
GV + L G+ V KP G+ V +Y L+ K+ + +G FKF++G EVI GW
Sbjct: 2 GVDRQILVEGDN-VTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 701 DVGVSGMKVG 730
D GV+ M VG
Sbjct: 61 DQGVAQMSVG 70
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 527 GVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIXGW 700
GV + L G+ V KP G+ V +Y L+ K+ + +G FKF++G EVI GW
Sbjct: 2 GVDRQILVEGDN-VTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 701 DVGVSGMKVG 730
D GV+ M VG
Sbjct: 61 DQGVAQMSVG 70
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2
Query: 527 GVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIXGWDV 706
G+ + K GNG + + G++V Y E +L + N F++G EVI G D+
Sbjct: 85 GIHHQVDKAGNGVMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDI 144
Query: 707 GVSGMKVG 730
G+ MKVG
Sbjct: 145 GIPKMKVG 152
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 527 GVQIEDLKLG-NGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIXGWD 703
GV + L G N +K G+ V +Y L K+ + + FKF++G EVI GWD
Sbjct: 198 GVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWD 257
Query: 704 VGVSGMKV 727
GV+ M V
Sbjct: 258 QGVAQMSV 265
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 569 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIXGWDVGVSGMKVG 730
++ G + ++Y G L + + + F F LG VI GWD G+ M VG
Sbjct: 42 SRKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVG 95
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 533 QIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIXGWDVGV 712
QI ++ A+ G + Y RL+ N + + + F FRL +EVI G D+ +
Sbjct: 151 QIHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAM 210
Query: 713 SGMKVG 730
GM G
Sbjct: 211 DGMCEG 216
>AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical
protein T28F12.1 protein.
Length = 431
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Frame = -1
Query: 685 LFCAKTELESRSLEAVVKHFVVLFKATFIV------DHDNFAWLSNRTITKFQVLNLYST 524
+FC K L+ A + F+ L TF+ +H N W RTI K V N+ S
Sbjct: 37 IFCKK--LKKHQTLAAIGLFIFLMTFTFVSNSQASGEHQNGRWAEGRTIEKRSVKNVISE 94
Query: 523 TESFLLLFFNWT 488
ES L + T
Sbjct: 95 EESKCLSLLSTT 106
>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
protein F11E6.7 protein.
Length = 1011
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -1
Query: 679 CAKTELES--RSLEAVVKHFVVLFKATFIVDHDNFAWLSNRTITKFQVLNLYSTTES 515
C KT L+S RSL AV V F + D + F W+ R + VL Y T +
Sbjct: 674 CMKTVLDSAKRSLSAVGVKTVGDFASLSKSDIEKFTWIKGRVVGARNVLMQYEKTRN 730
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,173,155
Number of Sequences: 27780
Number of extensions: 152089
Number of successful extensions: 349
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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