BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_F01 (771 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7 AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7 AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7 AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7 U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 23 3.6 EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 4.7 DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 4.7 U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 8.2 U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 8.2 U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 8.2 AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 8.2 >AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase variant 2 protein. Length = 1558 Score = 23.0 bits (47), Expect = 2.7 Identities = 11/56 (19%), Positives = 27/56 (48%) Frame = -3 Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221 T+ +++G V F + + +++P++ CF+C + ++ Q +G A Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981 >AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase variant 1 protein. Length = 1558 Score = 23.0 bits (47), Expect = 2.7 Identities = 11/56 (19%), Positives = 27/56 (48%) Frame = -3 Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221 T+ +++G V F + + +++P++ CF+C + ++ Q +G A Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981 >AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B protein. Length = 1558 Score = 23.0 bits (47), Expect = 2.7 Identities = 11/56 (19%), Positives = 27/56 (48%) Frame = -3 Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221 T+ +++G V F + + +++P++ CF+C + ++ Q +G A Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981 >AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A protein. Length = 1558 Score = 23.0 bits (47), Expect = 2.7 Identities = 11/56 (19%), Positives = 27/56 (48%) Frame = -3 Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221 T+ +++G V F + + +++P++ CF+C + ++ Q +G A Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981 >U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse transcriptase andRNase H protein. Length = 712 Score = 22.6 bits (46), Expect = 3.6 Identities = 9/30 (30%), Positives = 16/30 (53%) Frame = -2 Query: 386 RLVRGIGTHRILLQRSPQYSRFPFRSSSSV 297 R V + ILL+ ++ FPFR ++ + Sbjct: 189 RAVIDFDNNEILLRNGEKHHSFPFRKTTEI 218 >EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering hormone receptorisoform A protein. Length = 434 Score = 22.2 bits (45), Expect = 4.7 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = +3 Query: 111 LCLRRRNPASMFSKLTSSPKKHRS 182 +C R RN + + SP+ +RS Sbjct: 403 VCFRPRNNSILIKNFNDSPESNRS 426 >DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein. Length = 980 Score = 22.2 bits (45), Expect = 4.7 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +3 Query: 60 KKEEPCCVLCLFSPWSQ 110 KK P VLC + WSQ Sbjct: 517 KKVRPPQVLCYITSWSQ 533 >U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic protein protein. Length = 372 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/22 (31%), Positives = 15/22 (68%) Frame = -2 Query: 149 GKHRCRVSATQTQLRPRREQTQ 84 GK++ R T++RP+R+ ++ Sbjct: 240 GKNQQRTGTELTKMRPKRQSSR 261 >U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. Length = 322 Score = 21.4 bits (43), Expect = 8.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 15 NFRRNYTVIHRSN*KKKEEPCCVLCLFS 98 N +NYT + + KEEP C FS Sbjct: 34 NTEQNYTHNNEMYHRVKEEPIYESCRFS 61 >U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. Length = 470 Score = 21.4 bits (43), Expect = 8.2 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = +1 Query: 364 VPIPRTRRSRCICLRIPDSRI 426 V + R++ S +CL IP+S + Sbjct: 109 VLVHRSQNSNDVCLAIPESLV 129 >AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain transcription factor Fushitarazu protein. Length = 290 Score = 21.4 bits (43), Expect = 8.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 15 NFRRNYTVIHRSN*KKKEEPCCVLCLFS 98 N +NYT + + KEEP C FS Sbjct: 34 NTEQNYTHNNEMYHRVKEEPIYESCRFS 61 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 177,514 Number of Sequences: 336 Number of extensions: 3737 Number of successful extensions: 15 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 20753800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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