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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_F01
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = -3

Query: 388  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
            T+  +++G  V  F +      + +++P++     CF+C   + ++  Q   +G A
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = -3

Query: 388  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
            T+  +++G  V  F +      + +++P++     CF+C   + ++  Q   +G A
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = -3

Query: 388  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
            T+  +++G  V  F +      + +++P++     CF+C   + ++  Q   +G A
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = -3

Query: 388  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
            T+  +++G  V  F +      + +++P++     CF+C   + ++  Q   +G A
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 386 RLVRGIGTHRILLQRSPQYSRFPFRSSSSV 297
           R V     + ILL+   ++  FPFR ++ +
Sbjct: 189 RAVIDFDNNEILLRNGEKHHSFPFRKTTEI 218


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 111 LCLRRRNPASMFSKLTSSPKKHRS 182
           +C R RN + +      SP+ +RS
Sbjct: 403 VCFRPRNNSILIKNFNDSPESNRS 426


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 60  KKEEPCCVLCLFSPWSQ 110
           KK  P  VLC  + WSQ
Sbjct: 517 KKVRPPQVLCYITSWSQ 533


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 149 GKHRCRVSATQTQLRPRREQTQ 84
           GK++ R     T++RP+R+ ++
Sbjct: 240 GKNQQRTGTELTKMRPKRQSSR 261


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  NFRRNYTVIHRSN*KKKEEPCCVLCLFS 98
           N  +NYT  +    + KEEP    C FS
Sbjct: 34  NTEQNYTHNNEMYHRVKEEPIYESCRFS 61


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 364 VPIPRTRRSRCICLRIPDSRI 426
           V + R++ S  +CL IP+S +
Sbjct: 109 VLVHRSQNSNDVCLAIPESLV 129


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 15  NFRRNYTVIHRSN*KKKEEPCCVLCLFS 98
           N  +NYT  +    + KEEP    C FS
Sbjct: 34  NTEQNYTHNNEMYHRVKEEPIYESCRFS 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,514
Number of Sequences: 336
Number of extensions: 3737
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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