Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F01
(771 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.7
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 23 3.6
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 4.7
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 4.7
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 8.2
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 8.2
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 8.2
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 8.2
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/56 (19%), Positives = 27/56 (48%)
Frame = -3
Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
T+ +++G V F + + +++P++ CF+C + ++ Q +G A
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/56 (19%), Positives = 27/56 (48%)
Frame = -3
Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
T+ +++G V F + + +++P++ CF+C + ++ Q +G A
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/56 (19%), Positives = 27/56 (48%)
Frame = -3
Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
T+ +++G V F + + +++P++ CF+C + ++ Q +G A
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/56 (19%), Positives = 27/56 (48%)
Frame = -3
Query: 388 TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFSCTKPLVVVFDQW*DSGAA 221
T+ +++G V F + + +++P++ CF+C + ++ Q +G A
Sbjct: 926 TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYA 981
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 386 RLVRGIGTHRILLQRSPQYSRFPFRSSSSV 297
R V + ILL+ ++ FPFR ++ +
Sbjct: 189 RAVIDFDNNEILLRNGEKHHSFPFRKTTEI 218
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 111 LCLRRRNPASMFSKLTSSPKKHRS 182
+C R RN + + SP+ +RS
Sbjct: 403 VCFRPRNNSILIKNFNDSPESNRS 426
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 60 KKEEPCCVLCLFSPWSQ 110
KK P VLC + WSQ
Sbjct: 517 KKVRPPQVLCYITSWSQ 533
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -2
Query: 149 GKHRCRVSATQTQLRPRREQTQ 84
GK++ R T++RP+R+ ++
Sbjct: 240 GKNQQRTGTELTKMRPKRQSSR 261
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.4 bits (43), Expect = 8.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 15 NFRRNYTVIHRSN*KKKEEPCCVLCLFS 98
N +NYT + + KEEP C FS
Sbjct: 34 NTEQNYTHNNEMYHRVKEEPIYESCRFS 61
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 364 VPIPRTRRSRCICLRIPDSRI 426
V + R++ S +CL IP+S +
Sbjct: 109 VLVHRSQNSNDVCLAIPESLV 129
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.4 bits (43), Expect = 8.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 15 NFRRNYTVIHRSN*KKKEEPCCVLCLFS 98
N +NYT + + KEEP C FS
Sbjct: 34 NTEQNYTHNNEMYHRVKEEPIYESCRFS 61
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,514
Number of Sequences: 336
Number of extensions: 3737
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -