Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F01
(771 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13) 32 0.45
SB_43247| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 0.78
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 31 0.78
SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 30 1.8
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 1.8
SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 28 9.6
SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 33.5 bits (73), Expect = 0.19
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +3
Query: 279 KQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRR-SKIASDP 455
K + DTT E + T + + T P TT K P T P + + P
Sbjct: 1849 KTTVVADTTSVAETAALPKTTAVPETTTPPETTAKPETTGAPETTSAPKTTAVPEATAAP 1908
Query: 456 ETSPARISTRTAKMISSRYVTGQTETVSTRKTTYL 560
ET+ A +T + S+ T ET S +TT L
Sbjct: 1909 ETTSAPETTAAPETTSAPETTSVPETTSAPETTAL 1943
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRR-SKIASDPETSPAR 473
+TTG E S T +++ T P TT + +P T P ++ + P T+ A
Sbjct: 2359 ETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTTAAP 2418
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T + + + TG ET + TT
Sbjct: 2419 KTTASPETTAKPDTTGAAETTAVPVTT 2445
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARI 476
+TTG E S T + + T P TT P T P + S PET+ A
Sbjct: 1885 ETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPETTSAP-----ETTSVPETTSAPE 1939
Query: 477 STRTAKMISSRYVTGQTETVSTRKTTYL 560
+T + +S T + +T +TT++
Sbjct: 1940 TTALPETTASPETTAKPDTTGAPETTFV 1967
Score = 32.3 bits (70), Expect = 0.45
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 285 APLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRR-SKIASDPET 461
A + +TT E S T L K T P TT + P T P K + PET
Sbjct: 2127 AAVPETTSVPETTSAPENTALPKTTALPETTAAPETIAKPETTAPPETTALPKTTTLPET 2186
Query: 462 SPARISTRTAKMISSRYVTGQTETVSTRKTTYLRSS 569
+ A +T + + T ++T + R TT + S
Sbjct: 2187 TAAPETTAKPETTGAPETTSASDTTAVRGTTAVPES 2222
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/72 (33%), Positives = 29/72 (40%)
Frame = +3
Query: 339 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVT 518
T + K T P TT P T LP KI + PET+ +T + S T
Sbjct: 2896 TAVPKTTAAPETTPLPKTTAAPETTTLP-----KITAAPETTAVPKTTAAPETTSVPKTT 2950
Query: 519 GQTETVSTRKTT 554
ET S KTT
Sbjct: 2951 AAPETTSVPKTT 2962
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASD-PETSPAR 473
+TT E S T L K T P T+ P T P + A+ PET+
Sbjct: 2005 ETTAVPETTSAPETTALPKTTGAPETSSVQETTAAPETTAAPETTAAPEATAAPETTAPP 2064
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T + + + +T ET S KTT
Sbjct: 2065 ETTAAPEATAVQGITAAPETTSAPKTT 2091
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +3
Query: 339 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVT 518
T++ K T P TT P T LP K + PET+P +T + + T
Sbjct: 2944 TSVPKTTAAPETTSVPKTTAAPETTPLP-----KTTAAPETTPLPKTTAAPETTTLPKTT 2998
Query: 519 GQTETVSTRKTT 554
ET + KTT
Sbjct: 2999 AAPETTTLPKTT 3010
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/85 (30%), Positives = 33/85 (38%)
Frame = +3
Query: 300 TTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARIS 479
TT E + TTL K T+ P TT P T +P K + PET+ +
Sbjct: 2703 TTAAPEATAVPETTTLPKTTVAPETTTLPKTTAAPETTAVP-----KTTAAPETTSVPKT 2757
Query: 480 TRTAKMISSRYVTGQTETVSTRKTT 554
T + T ET S KTT
Sbjct: 2758 TAAPGTSTVPKTTVAAETTSVPKTT 2782
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLP-NLRRSKIASDPETSPAR 473
+TT E S T L + T P TT K P T +P + + + P T+
Sbjct: 1927 ETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVP 1986
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T ++ +++ T ET + +TT
Sbjct: 1987 GTTAVSETVATPETTAAPETTAVPETT 2013
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/86 (27%), Positives = 33/86 (38%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARI 476
+TT E + T + K T P TT P T +P K + PET+
Sbjct: 2798 ETTAAPETTAAPETTAVPKTTAAPETTAVPKTTAAPETTSVP-----KTTAAPETTSVPK 2852
Query: 477 STRTAKMISSRYVTGQTETVSTRKTT 554
+T + + T ET S KTT
Sbjct: 2853 TTAAPETTTLPKTTAAPETTSVPKTT 2878
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARI 476
+TTG E S T +++ T P TT + +P T P + S ET+
Sbjct: 2902 ETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAP-----ETTSPTETTAVPG 2956
Query: 477 STRTAKMISSRYVTGQTETVSTRKTTYL 560
+T K +S T + +T +TT++
Sbjct: 2957 TTAAPKTTASPETTAKPDTTGAAETTFV 2984
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARI 476
+TTG E S T + + T P TT P T P + S PET+ A
Sbjct: 3040 ETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPETTSAP-----ETTSVPETTSAPE 3094
Query: 477 STRTAKMISSRYVTGQTETVSTRKTTYL 560
+T + +S T + +T +TT++
Sbjct: 3095 TTALPETTASPETTAKPDTTGAPETTFV 3122
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASD-PETSPAR 473
+TT E S T L K T P T+ P T P + A+ PET+
Sbjct: 3160 ETTAVPETTSAPETTALPKTTGAPETSSVQETTAAPETTAAPETTAAPEATAAPETTAPP 3219
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T + + + +T ET S KTT
Sbjct: 3220 ETTAAPEATAVQGITAAPETTSAPKTT 3246
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLP-NLRRSKIASDPETSPAR 473
+TT E S T L + T P TT K P T +P + + + P T+
Sbjct: 3082 ETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVP 3141
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T ++ +++ T ET + +TT
Sbjct: 3142 GTTAVSETVATPETTAAPETTAVPETT 3168
>SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13)
Length = 265
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +3
Query: 219 LAAPLSYH*S-----NTTTRGFVQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDK 383
LA SYH S + T+R K L +TTG E S T+L + T P TT+
Sbjct: 10 LADGCSYHRSFSSSPDETSRNTSLPKTTSLPETTGLPETTSLPETTSLPETTSLPETTNL 69
Query: 384 TV*VHMPTDTRLPNLRR-SKIASDPETS 464
+P T LP + A+ PET+
Sbjct: 70 PETTSLPETTNLPETTSPPETATPPETT 97
>SB_43247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 212 QLAGRTAVLPLIKYNDQRFRTAEAGPTLGHYWKNGKEIENTEDYVEEVY 358
QLA + + ++ + GP LG + KN + N ED V +VY
Sbjct: 281 QLANISQFMMMLSIQTDEMARLKGGPLLGEFVKNMRGFANAEDGVRKVY 329
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 339 TTLKKYTMRPNTTDKTV*VHMP-TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 515
T + T+ P TTD P T T L +K PET+PA +T + ++
Sbjct: 217 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 276
Query: 516 TGQTETVSTRKTT 554
T ET +++TT
Sbjct: 277 TVAPETTVSQETT 289
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSPAR 473
++T TE T ++ T+ P TT T P T P + + + PET+PA
Sbjct: 269 ESTAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPEITFAPETTVVPETTPAL 328
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T + ++ T ET +++TT
Sbjct: 329 ETTSAPESTAATESTVAPETTVSQETT 355
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 339 TTLKKYTMRPNTTDKTV*VHMP-TDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYV 515
T + T+ P TTD P T T L +K PET+PA +T + ++
Sbjct: 2279 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 2338
Query: 516 TGQTETVSTRKTT 554
T ET +++TT
Sbjct: 2339 TVAPETTVSQETT 2351
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +3
Query: 291 LLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSP 467
+L+T+ E T+ TM P TT V P T P + + PET+
Sbjct: 26 VLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTALETTMVPETTA 85
Query: 468 ARISTRTAKMISSRYVTGQTETVSTRKTT 554
A +T ++ + T TET + +TT
Sbjct: 86 ALETTVASETTDAPATTLATETTAAPETT 114
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +3
Query: 291 LLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSP 467
+L+T+ E T+ TM P TT V P T P + + PET+
Sbjct: 1101 VLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTALETTMVPETTA 1160
Query: 468 ARISTRTAKMISSRYVTGQTETVSTRKTT 554
A +T ++ + T TET + +TT
Sbjct: 1161 ALETTVASETTDAPATTLATETTAAPETT 1189
>SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 332 TEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENR 445
TE + + S YHGQDGLG A G + P+ ++++
Sbjct: 151 TEGLTGDFVELSAYHGQDGLGD-AQGLREPDRTPLKDK 187
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +3
Query: 291 LLDTTGRTERKSRILRTTLKKYTMRPNT-TDKTV*VHMPTDTRLPNLRRSKIASDPETSP 467
+++TT TE + I TT K T P T T+ T PT + + ++ T+
Sbjct: 12 IIETTTTTEEPTTITETTTTKTTEEPTTITETTTTTEEPT-----TITETTTTTEEPTTI 66
Query: 468 ARISTRTAKMISSRYVTGQTETVSTR 545
I+T T + ++ +T T R
Sbjct: 67 TEITTTTEEPTTTTTTAAETPTTIMR 92
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASD-PETSPAR 473
+TT E S T L K T P T+ P T P + A+ PET+
Sbjct: 73 ETTAVPETTSAPETTALPKTTGAPETSSVQETTAAPETTAAPETTAAPEATAAPETTAPP 132
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T + + + +T ET S KTT
Sbjct: 133 ETTAAPEATAVQGITAAPETTSAPKTT 159
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Frame = +3
Query: 393 VH-MPTDTRLPNLRRSKIAS-DPETSPARISTRTAKMISSRYVTGQTETVSTRKTTYLRS 566
VH +P+ +R P+L + ++ P T+ I R+ + SR GQ T+ST KTT +
Sbjct: 1701 VHSIPSPSR-PSLNIAPSSTLTPSTAGHTIDIRSTNRVHSRAQEGQIPTLSTLKTTSTST 1759
Query: 567 S*NQ*KRXXXXXXXXXXXXXXXXXXXXXXXNSPILNTPSKLFLRIITXRPTKP 725
S + +P TP R T TKP
Sbjct: 1760 STTKYIPPPHSPPTTTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPETTKP 1812
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARI 476
DTT E + + T + T P+TT +P T P + + P+T+ A
Sbjct: 890 DTTAAPETTAALETTAAPETTAAPDTTAAPDTTAVPETTAAP-----ETTATPDTTAATE 944
Query: 477 STRTAKMISSRYVTGQTETVSTRKTT 554
+T + + T ET ST +TT
Sbjct: 945 TTAAPETTAVPETTAAPETTSTPETT 970
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSPAR 473
+TT E + T + T+ P TT P T P + + PET+ A
Sbjct: 494 ETTKEPETTAAPDTTAAPETTVAPETTIAPETTATPETTAAPETTVAPETTMTPETTAAP 553
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T + ++ T +ET + KTT
Sbjct: 554 ETTTAPETTAASETTAASETTAAPKTT 580
>SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 363 RPNTTDKTV*VHMPTDTRLPNLRRSKIASDPETSPARISTRTAKMISS 506
RP+ T T H P D R P + D +TS R S+ + + S
Sbjct: 544 RPSQTPPTSLKHFPGDERTPPTSLKHVPGDEQTSQVRFSSEPSSTLRS 591
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 297 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRSKIAS-DPETSPAR 473
+TT E T + TM P TT P T P + + + PET+ A
Sbjct: 514 ETTAAPETTMAPETTAAPETTMAPETTIAPEATVAPETTMAPETTAAPVTTMAPETTAAL 573
Query: 474 ISTRTAKMISSRYVTGQTETVSTRKTT 554
+T + ++R T ET KTT
Sbjct: 574 ETTMAPETTAARETTVAPETTLAPKTT 600
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +3
Query: 291 LLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSP 467
+L+T+ E T+ TM P TT V P T P + + PET+
Sbjct: 2353 VLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTALETTMVPETTA 2412
Query: 468 ARISTRTAKMISSRYVTGQTETVSTRKTT 554
A +T ++ + T TET + +TT
Sbjct: 2413 ALETTVASETTDAPATTLATETTAAPETT 2441
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 339 TTLKKYTMRPNTTDKTV*VHMPTDTRLPNLRRS-KIASDPETSPARISTRTAKMISSRYV 515
T+ TM P TT V P T P + + PET+ A +T + ++
Sbjct: 3316 TSAPATTMAPETTAAPVTTMAPETTAAPATTAALETTMVPETTAASETTVAPETTDAQAT 3375
Query: 516 TGQTETVSTRKTT 554
T ET + +KTT
Sbjct: 3376 TLAPETTAAQKTT 3388
>SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 660 SPILNTPSKLFLRIITXRPTKPFQVIITNHKHP 758
S I+ TPS+ LRIIT TK Q+I T + P
Sbjct: 91 SQIITTPSRTPLRIITDPITKISQIITTLSRTP 123
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 666 ILNTPSKLFLRIITXRPTKPFQVIITNHKHP 758
I+ TPS+ LRIIT TK Q+I T + P
Sbjct: 71 IITTPSRTPLRIITDPITKISQIITTPSRTP 101
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -1
Query: 507 LMRSFLPSL*IYEPVTSPDLTRFSTF----ADSGVWYP*AYAPRPSCPWYWD 364
L R+FLP +Y + +PDLT+ T D + Y + C WYWD
Sbjct: 1550 LRRTFLPYQGLYYVLITPDLTKQQTLLWRSGDLNISYGLGFY-ESGC-WYWD 1599
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 402 PTDTRLPNLRRSKIASDPETSPARISTRTAKMISSRYVTGQTET 533
PT T L+ ++ +S P TSPA T T + + +T T T
Sbjct: 773 PTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSITPTTVT 816
>SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 118 RHNCDHGENRHNTQHGSS 65
RHNC H RHN+ H ++
Sbjct: 100 RHNCLHNTTRHNSLHNTT 117
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,822,808
Number of Sequences: 59808
Number of extensions: 517299
Number of successful extensions: 1646
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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