Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_F01
(771 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g03680.1 68416.m00371 C2 domain-containing protein contains I... 31 0.64
At5g45190.1 68418.m05547 cyclin family protein similar to cyclin... 30 1.5
At5g62780.1 68418.m07881 DNAJ heat shock N-terminal domain-conta... 29 3.4
At2g18790.1 68415.m02187 phytochrome B (PHYB) Identical to SP|P1... 29 3.4
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 29 4.5
At1g13710.1 68414.m01611 cytochrome P450 family protein similar ... 28 5.9
At5g11920.1 68418.m01394 glycosyl hydrolase family 32 protein si... 28 7.9
At4g16250.1 68417.m02465 phytochrome D (PHYD) nearly identical t... 28 7.9
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 28 7.9
>At3g03680.1 68416.m00371 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1017
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +2
Query: 365 SQYHGQDGLGAYAYGYQTPES-AKVENRVRSGDVTGSY---IYK--DGKNDLIKVRYWSD 526
SQ G+ GL AY P + A E + + T I K DGK + +
Sbjct: 120 SQIKGEIGLKAYYVDENPPAAPAATEPKPEAAAATEEKPPEIAKAEDGKKETEAAKTEEK 179
Query: 527 RDGFHQEDNLPKVELKPVEEAPD 595
++G +E+ PK E KP E+ PD
Sbjct: 180 KEGDKKEEEKPKEEAKPDEKKPD 202
>At5g45190.1 68418.m05547 cyclin family protein similar to cyclin T1
[Equus caballus] GI:5052355; contains Pfam profile
PF00134: Cyclin, N-terminal domain
Length = 579
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 124 RRRHNCDHGENRHNTQHGSS 65
+RRHN ++GE H T GSS
Sbjct: 543 KRRHNSENGEESHKTSRGSS 562
>At5g62780.1 68418.m07881 DNAJ heat shock N-terminal
domain-containing protein contains Pfam PF00226: DnaJ
domain; similar to dnaJ (GI:144832) [Clostridium
acetobutylicum]
Length = 207
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 300 CPRVGPASAVRNLWSLYLINGKTAVR 223
CP G SA+ N+ S +ING+T +R
Sbjct: 104 CPNCGQNSAMTNISSTEVINGRTFIR 129
>At2g18790.1 68415.m02187 phytochrome B (PHYB) Identical to
SP|P14713 Phytochrome B {Arabidopsis thaliana}
Length = 1172
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 305 SSVQEWGLLQLYETSGRCI*SMVRQRCGQLIE 210
SS++ WGL+ + TS RCI +R C L++
Sbjct: 392 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQ 423
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -3
Query: 730 WKGFVGLXVIILRKSFEGVLRIGL--LCSSGS--SFLPCFFMSYTSSPHIWSLFYWFQLD 563
W+G + L + +GVLR+G LC L FF +Y H+ ++ LD
Sbjct: 404 WEGILRRLENSLDRKIDGVLRVGYDHLCEDDQFLYLLIAFFFNYVDDDHVKAMLVEDNLD 463
Query: 562 LR 557
++
Sbjct: 464 VK 465
>At1g13710.1 68414.m01611 cytochrome P450 family protein similar to
cytochrome P450 78A1 (SP:P48420) GI:349717 from [Zea
mays]
Length = 517
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 134 GIDVFQIDIEPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDQRFRTAEAGPTLGHYWKN 313
G F I EPE A++ L+S F D + + + L+ F A G YW+N
Sbjct: 91 GFSRFVISSEPETAKEILSSSAFADRPV--KESAYELL------FHRAMGFAPYGEYWRN 142
Query: 314 GKEIENT 334
+ I +T
Sbjct: 143 LRRISST 149
>At5g11920.1 68418.m01394 glycosyl hydrolase family 32 protein
similar to fructan 1-exohydrolase IIa GI:13940209 from
[Cichorium intybus]; contains Pfam profile PF00251:
Glycosyl hydrolases family 32
Length = 550
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 395 AYAYGYQTPESAKVENRVRSGDVTGSYIYKDGKNDLI--KVRYWSDRD 532
+Y G +T +++V ++ G+ Y++ DG+N +I + WS R+
Sbjct: 494 SYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAWSMRN 541
>At4g16250.1 68417.m02465 phytochrome D (PHYD) nearly identical to
SP|P42497 Phytochrome D {Arabidopsis thaliana}
Length = 1164
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 305 SSVQEWGLLQLYETSGRCI*SMVRQRCGQLIE 210
+S++ WGL+ + TS RCI +R C L++
Sbjct: 396 NSMRLWGLVVCHHTSARCIPFPLRYACEFLMQ 427
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 83 YAAWFFFFFLIRAMYHSIVPTKIQNY 6
YA+ F L R+M H VP K+++Y
Sbjct: 18 YASLTGFLMLFRSMLHDFVPEKLRSY 43
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,556,888
Number of Sequences: 28952
Number of extensions: 351949
Number of successful extensions: 1099
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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