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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E22
         (803 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|c...   110   3e-25
SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual          41   2e-04
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch...    31   0.14 
SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    30   0.44 
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac...    29   1.0  
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar...    27   2.4  
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|...    27   3.1  
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p...    27   4.1  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    26   7.2  
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo...    25   9.5  
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha...    25   9.5  

>SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 236

 Score =  110 bits (264), Expect = 3e-25
 Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 8/157 (5%)
 Frame = +2

Query: 305 GYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIW---LEKGI-----LASHETMAEI 460
           G A L    P   Y+KY   W    Q+  YL  L  W   L+K +     L S   + +I
Sbjct: 83  GLAELASNFP---YYKYNGVWDRSIQKVVYLYLLASWTGRLDKSLRPTYSLLSLSEVGQI 139

Query: 461 LGVSPVELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGF 640
           L V     +  FHL IE YL  +L++CSEL+R +VNSV  G+Y  P      + ++++ F
Sbjct: 140 LQVPVFPEESTFHLSIEQYLHAVLSLCSELARQSVNSVISGNYHIPFEALNTIQKVHSSF 199

Query: 641 RLLNLKNDHLRKRFDALKYDVKKIEEVVYDLSIRGLL 751
           ++L+LKND LR+ FD LKYD+K+ E+VVYDL I  L+
Sbjct: 200 QVLSLKNDSLRRHFDGLKYDLKRSEDVVYDLRIHKLV 236


>SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 231

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 41/213 (19%), Positives = 86/213 (40%), Gaps = 5/213 (2%)
 Frame = +2

Query: 119 FSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGISPACGKARLLFEKA 298
           F  F+  L ++Q+ RE I  + +E+   S+    +L     ++    P       +FEK 
Sbjct: 5   FLSFKNFLQEDQDKREKIIRLSREITIQSKRMIFLLHQTSSSDGFPLPKDFDRTSIFEKK 64

Query: 299 -HDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSP 475
            H     LK  +   +  K+        Q Y   +    WL+ G L S +  +  + ++ 
Sbjct: 65  IHKELESLKRELAGLNADKFSSACTHGLQEYVEAVTFKFWLQTGTLLSCKDSSFRISINF 124

Query: 476 VELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGF----R 643
           +           DY++G+  M  E+ R  V + ++   ++  +  KF+  L+        
Sbjct: 125 I-----------DYVLGVCDMTGEIMRFLVTNGSKFSVQQLTQQVKFLRGLHKNCSEIEH 173

Query: 644 LLNLKNDHLRKRFDALKYDVKKIEEVVYDLSIR 742
           L +     L+++   ++  + K+E + Y   +R
Sbjct: 174 LPSKVKSELQQKLSVMENSISKVEGICYSKILR 206


>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
            Mok13|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2358

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +2

Query: 527  LLTMCSELSRLAVNSVTRGDYERPLRISKFV-MELNAGFRLLNLKNDHLRKRFDALKYDV 703
            L T+ S   R  +N V R   E  L +   + M LN  F L   +ND       AL Y  
Sbjct: 1766 LETISSVHHRSPINQVVRNLNESQLSLDSVISMNLNKEFALTKTENDFTDDNGRALNYFS 1825

Query: 704  KKIEEV 721
            +K+EE+
Sbjct: 1826 QKLEEL 1831


>SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 244

 Score = 29.9 bits (64), Expect = 0.44
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +2

Query: 323 DAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILAS-HETMAEILGVSPVELKEGFH 499
           DA+     F    H  F+T  Y Y I  T+ + KG   +   TM + L    +   +   
Sbjct: 137 DALLTVSLFGLFHHLMFLTTNYSYTINSTLDISKGFFINVLSTMVQALVTVTIAFTKFVT 196

Query: 500 LDIEDYLIGLLTMCSELSR 556
           +D   Y+   L +   LSR
Sbjct: 197 IDFPIYVFSSLFLYHPLSR 215


>SPAC823.07 |||GPI-phospholipase A2 activity regulator
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 331

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 282 RRALPHAGEMPASL*CITWSTVVASRDIWSTSLHI 178
           RR +P   E PA   C++W+ V  +  +WS+  HI
Sbjct: 128 RRCIPD--EHPAKRLCLSWAIVGMNAWVWSSVFHI 160


>SPBC25H2.08c |mrs2||magnesium ion transporter
           Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 422

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 134 KNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNE 247
           ++LD+  E+   + T CK+VD+I ++   ++  I   E
Sbjct: 280 RDLDKHDEVELLLETYCKQVDEIVQQTDNLVGNIRSTE 317


>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 362

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = +2

Query: 77  KHVKMCXNELINKIFSDFQKNLDQEQEL----RETIRTICKEVDQISREATTVLQVIHYN 244
           K+  +C NE  NK++    K+++ ++++    +  I+ IC ++ Q        L+     
Sbjct: 261 KYKWLCINEKCNKLYGRHSKSINPQKQVCRLCKSQIKQICPKIKQ-PNAFQIFLKENSKR 319

Query: 245 EAGISPACGKARLLFEKAHDGYARLKDA 328
              + P      L+ +K  D Y R KDA
Sbjct: 320 LRKLHPHITHKELM-KKLSDEYHRTKDA 346


>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 704

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = -3

Query: 654 KFNNLKPAFSSITNLEILRGRS*SPRVTEFTARRDNSEHIVNSPIR*SSMSK-WKPSFNS 478
           +F N+  AF ++T   +LR  S     T        S  +VNS     S+S+    S   
Sbjct: 323 RFTNVLSAFDALTRTYLLRQNSKVVHATSQKQEMQTSRRVVNSCYMPESLSRNLSSSLQQ 382

Query: 477 TG 472
           TG
Sbjct: 383 TG 384


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 141 STKNKNYARLFGLYVKRLTKYLGK 212
           STK    A  +G YV++LTK + K
Sbjct: 699 STKTSKAASAYGAYVEQLTKLMDK 722


>SPBC13G1.08c |ash2||Ash2-trithorax family
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 652

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = -3

Query: 579 RVTEFTARRDNSEHIVNSPIR*SSMSKWKPSFNSTGLTPNISAMVSCEARIPFSSHI 409
           R  + T R  NSE+ +N+P      S +   F   G T     +V  E   P SS +
Sbjct: 192 RAKDETMRNQNSEYALNNPNLFDFRSGYIFPFQRVGATVPKKRLVETETPPPSSSKL 248


>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 4196

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 440  HETMAEILGVSPVELKEGFHLDIEDYLIGLLTMCSELSR 556
            H T+AEI   +    KE  + D  D+  G   +C+ L R
Sbjct: 4051 HATLAEIYCFTCSSWKEPCYFDDSDFYFGTKILCNILYR 4089


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,219,005
Number of Sequences: 5004
Number of extensions: 64605
Number of successful extensions: 188
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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