Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_E22
(803 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|c... 110 3e-25
SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual 41 2e-04
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 31 0.14
SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 30 0.44
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 29 1.0
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar... 27 2.4
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 27 3.1
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 4.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.2
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 25 9.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 9.5
>SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 110 bits (264), Expect = 3e-25
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 8/157 (5%)
Frame = +2
Query: 305 GYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIW---LEKGI-----LASHETMAEI 460
G A L P Y+KY W Q+ YL L W L+K + L S + +I
Sbjct: 83 GLAELASNFP---YYKYNGVWDRSIQKVVYLYLLASWTGRLDKSLRPTYSLLSLSEVGQI 139
Query: 461 LGVSPVELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGF 640
L V + FHL IE YL +L++CSEL+R +VNSV G+Y P + ++++ F
Sbjct: 140 LQVPVFPEESTFHLSIEQYLHAVLSLCSELARQSVNSVISGNYHIPFEALNTIQKVHSSF 199
Query: 641 RLLNLKNDHLRKRFDALKYDVKKIEEVVYDLSIRGLL 751
++L+LKND LR+ FD LKYD+K+ E+VVYDL I L+
Sbjct: 200 QVLSLKNDSLRRHFDGLKYDLKRSEDVVYDLRIHKLV 236
>SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual
Length = 231
Score = 40.7 bits (91), Expect = 2e-04
Identities = 41/213 (19%), Positives = 86/213 (40%), Gaps = 5/213 (2%)
Frame = +2
Query: 119 FSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGISPACGKARLLFEKA 298
F F+ L ++Q+ RE I + +E+ S+ +L ++ P +FEK
Sbjct: 5 FLSFKNFLQEDQDKREKIIRLSREITIQSKRMIFLLHQTSSSDGFPLPKDFDRTSIFEKK 64
Query: 299 -HDGYARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSP 475
H LK + + K+ Q Y + WL+ G L S + + + ++
Sbjct: 65 IHKELESLKRELAGLNADKFSSACTHGLQEYVEAVTFKFWLQTGTLLSCKDSSFRISINF 124
Query: 476 VELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGF----R 643
+ DY++G+ M E+ R V + ++ ++ + KF+ L+
Sbjct: 125 I-----------DYVLGVCDMTGEIMRFLVTNGSKFSVQQLTQQVKFLRGLHKNCSEIEH 173
Query: 644 LLNLKNDHLRKRFDALKYDVKKIEEVVYDLSIR 742
L + L+++ ++ + K+E + Y +R
Sbjct: 174 LPSKVKSELQQKLSVMENSISKVEGICYSKILR 206
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 31.5 bits (68), Expect = 0.14
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 527 LLTMCSELSRLAVNSVTRGDYERPLRISKFV-MELNAGFRLLNLKNDHLRKRFDALKYDV 703
L T+ S R +N V R E L + + M LN F L +ND AL Y
Sbjct: 1766 LETISSVHHRSPINQVVRNLNESQLSLDSVISMNLNKEFALTKTENDFTDDNGRALNYFS 1825
Query: 704 KKIEEV 721
+K+EE+
Sbjct: 1826 QKLEEL 1831
>SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 29.9 bits (64), Expect = 0.44
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +2
Query: 323 DAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILAS-HETMAEILGVSPVELKEGFH 499
DA+ F H F+T Y Y I T+ + KG + TM + L + +
Sbjct: 137 DALLTVSLFGLFHHLMFLTTNYSYTINSTLDISKGFFINVLSTMVQALVTVTIAFTKFVT 196
Query: 500 LDIEDYLIGLLTMCSELSR 556
+D Y+ L + LSR
Sbjct: 197 IDFPIYVFSSLFLYHPLSR 215
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 282 RRALPHAGEMPASL*CITWSTVVASRDIWSTSLHI 178
RR +P E PA C++W+ V + +WS+ HI
Sbjct: 128 RRCIPD--EHPAKRLCLSWAIVGMNAWVWSSVFHI 160
>SPBC25H2.08c |mrs2||magnesium ion transporter
Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 134 KNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNE 247
++LD+ E+ + T CK+VD+I ++ ++ I E
Sbjct: 280 RDLDKHDEVELLLETYCKQVDEIVQQTDNLVGNIRSTE 317
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +2
Query: 77 KHVKMCXNELINKIFSDFQKNLDQEQEL----RETIRTICKEVDQISREATTVLQVIHYN 244
K+ +C NE NK++ K+++ ++++ + I+ IC ++ Q L+
Sbjct: 261 KYKWLCINEKCNKLYGRHSKSINPQKQVCRLCKSQIKQICPKIKQ-PNAFQIFLKENSKR 319
Query: 245 EAGISPACGKARLLFEKAHDGYARLKDA 328
+ P L+ +K D Y R KDA
Sbjct: 320 LRKLHPHITHKELM-KKLSDEYHRTKDA 346
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -3
Query: 654 KFNNLKPAFSSITNLEILRGRS*SPRVTEFTARRDNSEHIVNSPIR*SSMSK-WKPSFNS 478
+F N+ AF ++T +LR S T S +VNS S+S+ S
Sbjct: 323 RFTNVLSAFDALTRTYLLRQNSKVVHATSQKQEMQTSRRVVNSCYMPESLSRNLSSSLQQ 382
Query: 477 TG 472
TG
Sbjct: 383 TG 384
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 141 STKNKNYARLFGLYVKRLTKYLGK 212
STK A +G YV++LTK + K
Sbjct: 699 STKTSKAASAYGAYVEQLTKLMDK 722
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -3
Query: 579 RVTEFTARRDNSEHIVNSPIR*SSMSKWKPSFNSTGLTPNISAMVSCEARIPFSSHI 409
R + T R NSE+ +N+P S + F G T +V E P SS +
Sbjct: 192 RAKDETMRNQNSEYALNNPNLFDFRSGYIFPFQRVGATVPKKRLVETETPPPSSSKL 248
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 440 HETMAEILGVSPVELKEGFHLDIEDYLIGLLTMCSELSR 556
H T+AEI + KE + D D+ G +C+ L R
Sbjct: 4051 HATLAEIYCFTCSSWKEPCYFDDSDFYFGTKILCNILYR 4089
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,219,005
Number of Sequences: 5004
Number of extensions: 64605
Number of successful extensions: 188
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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