Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E22
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical p...    28   6.8  
Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical p...    28   6.8  
U10401-10|AAA19062.2|  476|Caenorhabditis elegans Hypothetical p...    28   9.0  

>Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical
           protein F25H2.12b protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 626 LNAGFRLLNLKNDHLRKRFDALK-YDVKKIEEVVYDLSI 739
           LNA FR ++  N  +RKR  A K +++ +I E++  + I
Sbjct: 68  LNASFRTISSANGLVRKRIKAKKQHEIDRIVELISQIQI 106


>Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical
           protein F25H2.12a protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 626 LNAGFRLLNLKNDHLRKRFDALK-YDVKKIEEVVYDLSI 739
           LNA FR ++  N  +RKR  A K +++ +I E++  + I
Sbjct: 106 LNASFRTISSANGLVRKRIKAKKQHEIDRIVELISQIQI 144


>U10401-10|AAA19062.2|  476|Caenorhabditis elegans Hypothetical
           protein T20B12.9 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 56  KEPRLLIKHVKMCXNELINKIFSDFQKNL 142
           ++PRL  KH+ +C   +  K+ SDF+K +
Sbjct: 70  QDPRLSFKHLNVCATNITLKV-SDFRKKI 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,870,494
Number of Sequences: 27780
Number of extensions: 361398
Number of successful extensions: 1132
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)