Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_E21
(817 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0533 - 29818276-29818866 67 1e-11
09_04_0567 + 18585556-18586113 57 2e-08
03_05_0040 + 20162923-20163255 34 0.12
07_01_0943 - 7959813-7960113,7960193-7960363,7960446-7961278,796... 32 0.47
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 32 0.63
09_06_0315 - 22246879-22247643,22247722-22247862,22248509-222485... 31 0.83
04_03_0922 + 20834195-20836603 31 0.83
06_03_1348 - 29497084-29497384,29497464-29497634,29497717-294985... 31 1.4
03_04_0008 - 16274158-16274458,16274791-16275623,16275706-162761... 31 1.4
10_05_0091 - 9085506-9085758,9085838-9085992,9086091-9086132,908... 30 2.5
01_06_1389 - 36969414-36969436,36970027-36970394,36970474-369706... 30 2.5
04_03_0574 - 17338777-17339077,17339390-17340222,17340304-173407... 29 3.3
08_02_0778 + 21119812-21119941,21120030-21120463,21120576-211206... 29 4.4
08_01_0223 - 1787078-1787701,1787928-1788016,1788242-1788542 29 4.4
07_01_0809 - 6347986-6348048,6348460-6348571,6348956-6349041 29 5.8
06_03_0106 + 16702019-16702600 29 5.8
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426... 29 5.8
11_06_0576 - 25127807-25128107,25128241-25128357,25128730-251292... 28 7.7
09_06_0032 + 20353789-20353963,20354240-20354340,20354426-203545... 28 7.7
08_02_0942 - 22845270-22845570,22845650-22845820,22845903-228467... 28 7.7
04_03_0421 - 15725045-15725193,15725528-15725599,15725709-157257... 28 7.7
01_03_0214 + 13863123-13863593,13863671-13864132,13864308-138650... 28 7.7
>02_05_0533 - 29818276-29818866
Length = 196
Score = 67.3 bits (157), Expect = 1e-11
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Frame = +3
Query: 114 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIG--TDV--VERKVVD--GVLHTHRLV 275
M ++T EH + HPW+ V AAWRK+ +P + + DV + R+V G L R +
Sbjct: 1 MVVYTQEHVYRHPWDRVTAAAWRKFTDPASRTALSHVADVHTLHRRVDPEAGRLQAARSI 60
Query: 276 SSKW---------FFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVD 428
+ + P A + G A +C+ E S V+ +R M + N++ I V+
Sbjct: 61 TVRSPPLPFILRRLLPAAASSPSGAA-LCHCVETSLVDAPRRAMDVVVRNVSLRGLIEVE 119
Query: 429 ETVRYTPHPSDSSK-TLLKQEAVVTVQGVPLSSY------MEDLLTNKISLNAGKGRQAI 587
E Y PHP + T +QE T++ PLS+ +E + N+ KGR+ +
Sbjct: 120 ERSTYRPHPERPEEWTQFRQE--TTIRCRPLSALAAVAEKVETRCAERFLQNSAKGREVV 177
Query: 588 EWVIGKFDTEIKELASSA 641
E + + E ASSA
Sbjct: 178 ERICRYLEAEAAGAASSA 195
>09_04_0567 + 18585556-18586113
Length = 185
Score = 56.8 bits (131), Expect = 2e-08
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Frame = +3
Query: 123 WTSEHTFNHPWETVAQAAWRKYPNPMNPA-----VIGTDVVERKV--VDGVLHTHRLVSS 281
+T EH + HPW V AAWRK+ + A ++ + R+V G + R ++
Sbjct: 5 YTQEHVYRHPWHRVTAAAWRKFTDADARAAPLSHILEVHTLSRRVDAGSGRIDAVRAIAG 64
Query: 282 KW-FFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
+ P + L+ A + E + V+ R M + + N + V+ET Y PHP
Sbjct: 65 RAPPLPLLLRGLVAAADVVLCVEHTTVDGPARAMRVISRNANLRALVHVEETCSYRPHPE 124
Query: 459 DSSK-TLLKQEAVVTVQGVPLSS-------YMEDLLTNKISLNAGKGRQAIEWV 596
+ TL +QE +++ PL++ +E + NA +GR+ +E +
Sbjct: 125 RPDEWTLFRQE--TSIRCAPLAAVAAWAAEMVERRCAERFRQNASQGREVVETI 176
>03_05_0040 + 20162923-20163255
Length = 110
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = -1
Query: 808 SSFQLLWLALALVNFSISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELA 629
+SF L+ ALA++ SIS +V + I S L+A + +S I + S+V L AE+
Sbjct: 5 TSFVLVLSALAIMTISISVAVTIVISTIVSTILVARLSVSGIVLVLLLPPSAVQLVAEIV 64
Query: 628 SSLI 617
S LI
Sbjct: 65 SILI 68
>07_01_0943 -
7959813-7960113,7960193-7960363,7960446-7961278,
7961360-7961821,7961899-7962606
Length = 824
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 300 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
+A+ I T K ++ + V P MTL T TF + D V+ TP PS
Sbjct: 432 YAKVFIDTVKDTWSGYLLPVPPNDEIMTLGDTRKTFIQWPKEDIVVKMTPRPS 484
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/76 (26%), Positives = 42/76 (55%)
Frame = +3
Query: 507 GVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSI 686
G + + E+L N +S N + ++ E VI D++ L + +S ++ L+ +K S+
Sbjct: 644 GKKIETRKEELKAN-LSTNLMRRQKEFEAVISSADSKTLSLEA---ESKEQELNSSKSSL 699
Query: 687 DDITTSARRSMDDISS 734
DD+T + ++D I++
Sbjct: 700 DDLTAMLKANVDAINN 715
>09_06_0315 -
22246879-22247643,22247722-22247862,22248509-22248561,
22248755-22248919,22249685-22249799,22249937-22250025,
22250578-22250608
Length = 452
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 159 TVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKW-FFPRW 302
TV++A P P++PAV ++ +VV + + + S W FF RW
Sbjct: 47 TVSKAEVLASPPPISPAVNAVIIIRNRVVLSIANIFSVAVSLWPFFVRW 95
>04_03_0922 + 20834195-20836603
Length = 802
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 730 EISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSNFP 599
E+SSI L+ + + + F CDN+S +L+ + + + V FP
Sbjct: 547 EVSSIGLIQHINLIKLIGFCCDNDSKLLVYEHMPNRSLDVHLFP 590
>06_03_1348 -
29497084-29497384,29497464-29497634,29497717-29498549,
29498631-29499092,29499171-29499904,29499993-29500122
Length = 876
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 300 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
+A+ I T K ++ V P MTL TF + D V+ TPHPS
Sbjct: 484 YAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPHPS 536
>03_04_0008 -
16274158-16274458,16274791-16275623,16275706-16276167,
16276245-16276882,16277068-16277197
Length = 787
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 300 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
+A+ I T K ++ V P MTL TF + D V+ TPHPS
Sbjct: 452 YAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPHPS 504
>10_05_0091 -
9085506-9085758,9085838-9085992,9086091-9086132,
9086379-9086921,9087003-9087287,9087332-9087463,
9087542-9087729,9088186-9088240
Length = 550
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 297 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
R+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 261 RYAKVSIDTVKDTWSGYPLPVPPNDELMTLGDARKTFIQWPKEDIVVKMTPRPS 314
>01_06_1389 -
36969414-36969436,36970027-36970394,36970474-36970644,
36970727-36971559,36971642-36972103,36972182-36972915,
36973004-36973133
Length = 906
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 297 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSK 470
R+A+ I T K ++ V P MTL TF + D V+ TP PS ++
Sbjct: 483 RYAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPSQPTE 540
>04_03_0574 -
17338777-17339077,17339390-17340222,17340304-17340765,
17340843-17341030,17341244-17341576,17341665-17341796,
17342604-17342643
Length = 762
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 297 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
R+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 426 RYAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPS 479
>08_02_0778 +
21119812-21119941,21120030-21120463,21120576-21120695,
21121356-21121898,21121988-21122172,21122255-21122425,
21122505-21122805
Length = 627
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 300 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
+A+ I T K ++S V P MTL TF + D V+ TP PS
Sbjct: 270 YAKVSIDTVKDTWSSYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPS 322
>08_01_0223 - 1787078-1787701,1787928-1788016,1788242-1788542
Length = 337
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/82 (19%), Positives = 33/82 (40%)
Frame = +3
Query: 300 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKTLL 479
W + ++ I +++E +P ++ T + FC+ D P +T+
Sbjct: 54 WEEKVVSVLDIVRRYQLTEYDPKLKEFTPTRVSFCFCNMAFFDHDKESKISPGSPIRTIP 113
Query: 480 KQEAVVTVQGVPLSSYMEDLLT 545
+ V+ V + + ED LT
Sbjct: 114 SSKFVMLEGSVNVIAIKEDTLT 135
>07_01_0809 - 6347986-6348048,6348460-6348571,6348956-6349041
Length = 86
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 224 CCGKKSCRWCTSYS*ISQFQMVFSTMGP-GANWYCKNMLC 340
CC +C T ++QF+ FST+ P G C+ M C
Sbjct: 30 CCSYNTCEDSTIKCTMTQFEDQFSTIKPDGIQVRCRKMCC 69
>06_03_0106 + 16702019-16702600
Length = 193
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 221 CPYDGWIHRI-RIFSPCCLSNCFP 153
CP+ GW H + R+ SP +C P
Sbjct: 85 CPHHGWTHHLRRVISPPSSPDCMP 108
>01_06_0319 -
28441082-28441102,28441630-28441701,28442568-28442627,
28442918-28443105,28444300-28444327,28444880-28444907,
28444942-28445163,28445238-28445409,28446224-28447468,
28447573-28447741,28447820-28448045,28449096-28449451,
28449530-28449724,28450655-28450864,28451729-28452004
Length = 1155
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -1
Query: 739 ALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSNFPITHSIACLPLPAF 560
ALD S + AD +M +I+ CD + VL QA + S + S+ +PL
Sbjct: 393 ALDFYSELCSHADQIMETIEKHFCDEETKVLPQARMLFSPEKQRQL-LYKSLCVMPLKLL 451
Query: 559 REIL 548
+L
Sbjct: 452 ERVL 455
>11_06_0576 -
25127807-25128107,25128241-25128357,25128730-25129271,
25129353-25129814,25129893-25130626,25130715-25130742
Length = 727
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 297 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
R+A+ I T K ++ + P MTL TF + D V+ TP PS
Sbjct: 449 RYAKVSIDTVKDTWSGYPLPMPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPS 502
>09_06_0032 +
20353789-20353963,20354240-20354340,20354426-20354560,
20354633-20354714,20354829-20354896,20354984-20355073,
20355133-20355257,20355384-20355717,20355841-20355957,
20356058-20356485,20356564-20356813,20356944-20357194,
20357278-20357587
Length = 821
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 597 IGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKL 770
I + + E+K AS++C S E+L + + I ++ + M+ +S LD+ K+
Sbjct: 339 IARLENELKFPASASCTSHAEILREKDELIKNLEEQLKELMEQ-KDTVQSQLDNFRKV 395
>08_02_0942 -
22845270-22845570,22845650-22845820,22845903-22846735,
22846817-22847278,22847357-22848090,22848179-22848308
Length = 876
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 300 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
+A+ I T K ++ V P + MTL TF + D V+ TP PS
Sbjct: 484 YAKVSIDTVKDTWSGYPLPVPPNDKIMTLGDARKTFIQWPKEDIVVKMTPRPS 536
>04_03_0421 -
15725045-15725193,15725528-15725599,15725709-15725784,
15728607-15728679,15728919-15728983,15729423-15729681,
15729761-15729931,15730014-15730846,15731097-15731390,
15731469-15731939
Length = 820
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 297 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
R+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 296 RYAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDACKTFIQWPKEDIVVKMTPRPS 349
>01_03_0214 +
13863123-13863593,13863671-13864132,13864308-13865038,
13865121-13865291,13865371-13865629,13866069-13866158
Length = 727
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 300 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 458
+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 321 YAKVSIDTVKDTWSGYPLPVPPNDEIMTLSDARKTFIQWPKEDIVVKMTPRPS 373
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,767,147
Number of Sequences: 37544
Number of extensions: 416317
Number of successful extensions: 1142
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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