Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E21
         (817 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   4.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   4.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   7.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 282 KWFFPRWAQAL 314
           K+FFP+W Q L
Sbjct: 648 KFFFPKWLQVL 658


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 71  GSLRLKIIFTYHITDTTP 18
           G L    +FTY+IT++TP
Sbjct: 202 GELFDATVFTYNITNSTP 219


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 71  GSLRLKIIFTYHITDTTP 18
           G L    +FTY+IT++TP
Sbjct: 217 GELFDATVFTYNITNSTP 234


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 71  GSLRLKIIFTYHITDTTP 18
           G L    +FTY+IT++TP
Sbjct: 105 GELFDATVFTYNITNSTP 122


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = +3

Query: 492 VVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQ 671
           V+T QGV LS Y    +     L  G GR       G      ++L  +A    + +   
Sbjct: 359 VITPQGVFLSLYQPQGMNILGDLIEGTGRSVNPRYYGSLQAAARKLLGNA-PEVENIWDY 417

Query: 672 TKKSID 689
           T  S++
Sbjct: 418 TPSSLE 423


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 628 LQVQPVKVQMNYYHKQRSQL 687
           +Q+ P+ ++   YHKQ+ +L
Sbjct: 127 IQICPIYIESFSYHKQKLRL 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,393
Number of Sequences: 438
Number of extensions: 4967
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)