Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E18
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical pr...   128   5e-30
Z81491-7|CAI46570.1|  184|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z70267-7|CAA94215.1|  303|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z68003-7|CAA91980.1|  303|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U39678-10|AAV28360.1|  436|Caenorhabditis elegans Hypothetical p...    27   9.6  

>Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical
           protein W09C5.8 protein.
          Length = 175

 Score =  128 bits (308), Expect = 5e-30
 Identities = 63/147 (42%), Positives = 87/147 (59%)
 Frame = +1

Query: 139 KLGXREWVGYGFNGQPNYVXRPDFPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTL 318
           K   RE VGYG NG   Y  R D+  PAIRFR++   I  +R KE+ DW+ L+ EEKK L
Sbjct: 29  KAAGRELVGYGANGDNIYQDRLDYWYPAIRFRKEDSVIAPIRAKEQADWKNLSAEEKKLL 88

Query: 319 YRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQ 498
           YR SF QT +EF+APTG WK +    L +  L  +  + + V VY  +P +   E ++AQ
Sbjct: 89  YRYSFRQTLSEFEAPTGYWKVISAVILSVLGLCTYYAVLLNVCVYPELPPTFQNEYKEAQ 148

Query: 499 LQRMLDLKVNPIDGLASKWDYENNRWK 579
           ++R L L+     G  + +DYEN +WK
Sbjct: 149 VERALVLEKGQFLGAPTHYDYENKKWK 175


>Z81491-7|CAI46570.1|  184|Caenorhabditis elegans Hypothetical
           protein D1086.11 protein.
          Length = 184

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 397 LVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKW---DYEN 567
           ++   L   + ++  V+  SP+  S  EE QK      LD++ NP D    KW   DY++
Sbjct: 1   MIWQVLITLVVLSATVYSESPLTPSKIEECQKT-CGVPLDIRTNPDDTKCKKWNNCDYDD 59

Query: 568 NR 573
            +
Sbjct: 60  RK 61


>Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical
           protein C54E10.4 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -1

Query: 689 IGITFIILHRCLFS*IHNFFXTLQPRSVYSPVQYQIYFQRLFS*SHLEASPSMGFT 522
           IG  F++   CL+  +H      + R+  SP  YQ++   L S +     P M  T
Sbjct: 201 IGWVFVVASYCLYLGVHTMMILQRLRAHMSPQTYQMHRTALISLTMQMVIPGMLLT 256


>Z70267-7|CAA94215.1|  303|Caenorhabditis elegans Hypothetical
           protein E02H4.6 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/37 (43%), Positives = 16/37 (43%)
 Frame = +1

Query: 172 FNGQPNYVXRPDFPLPAIRFREDTPDIKALREKEKGD 282
           FNG P     PD   P I FR  T    AL E  K D
Sbjct: 168 FNGTPPRALAPDAKSPEIMFRGHTHVSPALEEGLKAD 204


>Z68003-7|CAA91980.1|  303|Caenorhabditis elegans Hypothetical
           protein E02H4.6 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/37 (43%), Positives = 16/37 (43%)
 Frame = +1

Query: 172 FNGQPNYVXRPDFPLPAIRFREDTPDIKALREKEKGD 282
           FNG P     PD   P I FR  T    AL E  K D
Sbjct: 168 FNGTPPRALAPDAKSPEIMFRGHTHVSPALEEGLKAD 204


>Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical
           protein F35H8.3 protein.
          Length = 422

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 492 GSAPENVGP*GESHRWTCLQVGLRKQPLEVNLILHWRVNT 611
           G  PE++ P G+S R++C    LR    + ++++H R++T
Sbjct: 285 GPPPEDLLPNGKSARYSCSYCNLRFH-FKKDMLVHERIHT 323


>U39678-10|AAV28360.1|  436|Caenorhabditis elegans Hypothetical
           protein C39D10.11 protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 411 FGCLDLHGHESLCVQSYS*LIE*REAEGSAPE 506
           FGC D HG + LC+     L+   + +G+  E
Sbjct: 10  FGCFDYHGAKLLCIDEAKNLVLISQTDGTDVE 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,066,905
Number of Sequences: 27780
Number of extensions: 339071
Number of successful extensions: 923
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)