Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_E17
(861 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 169 3e-42
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 169 3e-42
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 153 1e-37
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 62 6e-10
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 60 2e-09
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 56 2e-08
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 56 2e-08
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 56 3e-08
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 56 3e-08
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 56 4e-08
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 55 5e-08
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 55 5e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 55 5e-08
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 54 1e-07
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 54 1e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 52 4e-07
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 52 5e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 5e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 52 5e-07
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 51 9e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 51 1e-06
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 50 2e-06
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 50 2e-06
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 50 2e-06
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 50 3e-06
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 49 5e-06
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 49 5e-06
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 48 6e-06
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 48 8e-06
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 47 1e-05
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 47 1e-05
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 46 2e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 46 2e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 46 2e-05
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 46 3e-05
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 46 3e-05
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 46 3e-05
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 46 3e-05
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 46 4e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 45 6e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 45 6e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 45 6e-05
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 45 6e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 45 6e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 45 7e-05
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 44 1e-04
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 44 1e-04
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 44 1e-04
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 44 2e-04
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 43 2e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 43 2e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 43 2e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 43 2e-04
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 43 2e-04
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 43 3e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 42 4e-04
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 42 4e-04
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 42 7e-04
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 42 7e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 41 0.001
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 41 0.001
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 41 0.001
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 41 0.001
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 41 0.001
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 41 0.001
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 40 0.002
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 40 0.002
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 40 0.002
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 40 0.002
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 40 0.002
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 40 0.002
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 40 0.002
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 40 0.003
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 40 0.003
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 39 0.004
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 39 0.004
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 39 0.004
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 39 0.004
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 39 0.004
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 39 0.004
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 39 0.005
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 39 0.005
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 39 0.005
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 38 0.009
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 38 0.011
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 38 0.011
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.011
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 38 0.011
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 38 0.011
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 37 0.020
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 37 0.020
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 37 0.020
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 37 0.020
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 37 0.020
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 37 0.020
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 36 0.026
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 36 0.026
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 36 0.026
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 36 0.026
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 36 0.026
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 36 0.035
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 36 0.035
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 36 0.046
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 36 0.046
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 36 0.046
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 35 0.061
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 35 0.080
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 34 0.11
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 34 0.11
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 34 0.14
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 34 0.14
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 34 0.14
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 34 0.14
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 34 0.14
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 34 0.14
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 34 0.14
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 34 0.14
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 33 0.18
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 33 0.18
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 33 0.18
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 33 0.18
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 33 0.24
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 33 0.24
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 33 0.32
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 33 0.32
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 32 0.43
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.43
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.43
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 32 0.43
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 32 0.43
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 32 0.43
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.56
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 32 0.56
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 32 0.56
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 31 0.75
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 31 0.75
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 31 0.75
At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein ... 31 0.75
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.99
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 31 1.3
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 1.3
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 30 1.7
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 30 1.7
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 30 1.7
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 30 1.7
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 30 2.3
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 2.3
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 29 3.0
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 3.0
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 3.0
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 3.0
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 3.0
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 3.0
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 29 3.0
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 29 4.0
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 4.0
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 29 4.0
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 29 4.0
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 5.3
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 28 7.0
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 28 7.0
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 7.0
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 9.2
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 28 9.2
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 169 bits (410), Expect = 3e-42
Identities = 79/181 (43%), Positives = 117/181 (64%), Gaps = 9/181 (4%)
Frame = +1
Query: 268 QEAETLKNAIRDARKAACDTSLAQATS----NLEPIGRIQMRTRRTLRGHLAKIYAMHWG 435
+ L++ +R R DT +A+ ++ G + RTL+GH K+Y++ W
Sbjct: 15 ETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWT 74
Query: 436 SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 615
+ +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G VACGGLD++CSI+
Sbjct: 75 PERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIF 134
Query: 616 SLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCALWDIXTGQQCGQ 780
SL + ++G V VSR L GH GY+SCC+++ +D ++TSSGD TC LWD+ TG +
Sbjct: 135 SLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSV 194
Query: 781 F 783
F
Sbjct: 195 F 195
Score = 41.1 bits (92), Expect = 0.001
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAI-----PLRSSWVMT 549
R L GH + + ++ +L+++S D I+WD T K ++ V++
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 550 CAYAPSG-SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN-QILTS 723
+ + S ++ G D+ ++ TR + R R GH G ++ +F D + T
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWD--TRAAS-RAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Query: 724 SGDMTCALWDIXTGQQ 771
S D TC L+DI TG Q
Sbjct: 267 SDDGTCRLYDIRTGHQ 282
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 169 bits (410), Expect = 3e-42
Identities = 79/181 (43%), Positives = 117/181 (64%), Gaps = 9/181 (4%)
Frame = +1
Query: 268 QEAETLKNAIRDARKAACDTSLAQATS----NLEPIGRIQMRTRRTLRGHLAKIYAMHWG 435
+ L++ +R R DT +A+ ++ G + RTL+GH K+Y++ W
Sbjct: 15 ETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWT 74
Query: 436 SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 615
+ +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G VACGGLD++CSI+
Sbjct: 75 PERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIF 134
Query: 616 SLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCALWDIXTGQQCGQ 780
SL + ++G V VSR L GH GY+SCC+++ +D ++TSSGD TC LWD+ TG +
Sbjct: 135 SLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSV 194
Query: 781 F 783
F
Sbjct: 195 F 195
Score = 41.1 bits (92), Expect = 0.001
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAI-----PLRSSWVMT 549
R L GH + + ++ +L+++S D I+WD T K ++ V++
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 550 CAYAPSG-SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN-QILTS 723
+ + S ++ G D+ ++ TR + R R GH G ++ +F D + T
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWD--TRAAS-RAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Query: 724 SGDMTCALWDIXTGQQ 771
S D TC L+DI TG Q
Sbjct: 267 SDDGTCRLYDIRTGHQ 282
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 6/134 (4%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW-- 540
R R RT GH + + + D + S DG ++D T +++
Sbjct: 235 RAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGEN 294
Query: 541 --VMTCAYAPSGSYVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDN 708
V + A++ SG + G +N C ++ E + + + H +SC D +
Sbjct: 295 GPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 354
Query: 709 QILTSSGDMTCALW 750
+ T S D +W
Sbjct: 355 ALCTGSWDSNLKIW 368
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 153 bits (371), Expect = 1e-37
Identities = 66/129 (51%), Positives = 95/129 (73%), Gaps = 5/129 (3%)
Frame = +1
Query: 412 KIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGG 591
++Y++ W + +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G VACGG
Sbjct: 5 QVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGG 64
Query: 592 LDNICSIYSLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCALWDI 756
LD++CSI+SL + ++G V VSR L GH GY+SCC+++ +D ++TSSGD TC LWD+
Sbjct: 65 LDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDV 124
Query: 757 XTGQQCGQF 783
TG + F
Sbjct: 125 TTGLKTSVF 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAI-----PLRSSWVMT 549
R L GH + + ++ +L+++S D I+WD T K ++ V++
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 147
Query: 550 CAYAPSG-SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN-QILTS 723
+ + S ++ G D+ ++ TR + R R GH G ++ +F D + T
Sbjct: 148 VSISGSNPNWFISGSCDSTARLWD--TRAAS-RAVRTFHGHEGDVNTVKFFPDGYRFGTG 204
Query: 724 SGDMTCALWDIXTGQQ 771
S D TC L+DI TG Q
Sbjct: 205 SDDGTCRLYDIRTGHQ 220
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 6/134 (4%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW-- 540
R R RT GH + + + D + S DG ++D T +++
Sbjct: 173 RAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGEN 232
Query: 541 --VMTCAYAPSGSYVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDN 708
V + A++ SG + G +N C ++ E + + + H +SC D +
Sbjct: 233 GPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 292
Query: 709 QILTSSGDMTCALW 750
+ T S D +W
Sbjct: 293 ALCTGSWDSNLKIW 306
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 61.7 bits (143), Expect = 6e-10
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Frame = +1
Query: 334 AQATSNLEPIGRIQM----RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT 501
A +T N G + + R +TL GH A I + + +D L SAS D +I+W +
Sbjct: 15 ANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATN 74
Query: 502 TNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL 681
+ +H SS + A++ S S+ C D+ C++ R + L GH+ ++
Sbjct: 75 YSLIHRYEGHSSGISDLAWS-SDSHYTCSASDD-CTLRIWDAR-SPYECLKVLRGHTNFV 131
Query: 682 SCCRF-LDDNQILTSSGDMTCALWDIXTGQ 768
C F N I++ S D T +W++ TG+
Sbjct: 132 FCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
+ LRGH ++ +++ S +VS S D + +W+ T V I S + + +
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCA 744
GS + D C I+ K EG + + S +S +F + + IL ++ D T
Sbjct: 182 GSLIVSASHDGSCKIWDAK--EGTC-LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK 238
Query: 745 LWDIXTGQ 768
L + TG+
Sbjct: 239 LSNYATGK 246
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +1
Query: 370 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 549
+Q + + H + + + DS L S SQDGK+ +W T + S V +
Sbjct: 251 LQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTS 310
Query: 550 CAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQILTSS 726
+++ GS + D I+ LK+ ++ +E GH+ Y++ F D ++I+T+S
Sbjct: 311 LSFSRDGSQLLSTSFDQTARIHGLKSG----KLLKEFRGHTSYVNHAIFTSDGSRIITAS 366
Query: 727 GDMTCALWDIXT 762
D T +WD T
Sbjct: 367 SDCTVKVWDSKT 378
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 507
+ RGH + + + SD +++AS D + VWDS TT+
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 380
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 1/178 (0%)
Frame = +1
Query: 247 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 426
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 143 NAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLE--EAKVVRTLTGHRSNCVSV 200
Query: 427 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 606
++ S S D L +WD +H + V + P G ++ GG DN+
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVV 260
Query: 607 SIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIXTGQQCG 777
++ L ++ E H G + F +L T S D T WD+ T + G
Sbjct: 261 KVWDLTAG----KLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIG 314
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +1
Query: 397 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 576
+ H KI ++ + L + S D + WD T + + ++ V + P G
Sbjct: 275 KSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKS 334
Query: 577 VACGGLDNICSIYS 618
V C GL I+S
Sbjct: 335 VLC-GLQESLKIFS 347
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 579
GH I + + SD+R +VSAS D L +WD T + + + +++ + P + +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 580 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDNQILTSSGDMTCALWDI 756
G D I+ + T + + LP HS ++ F D + I++SS D C +WD
Sbjct: 129 VSGSFDETVRIWDVTTG----KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 757 XTG 765
TG
Sbjct: 185 GTG 187
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
+TL GH + +++ S +VS S D + +WD T + +P S V +
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSGDMTCA 744
GS + D +C I+ T G+ V + + +S RF + + IL + D T
Sbjct: 167 GSLIVSSSYDGLCRIWDSGT--GHC-VKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLR 223
Query: 745 LWDIXTGQQCGQFT 786
LW+I + + +T
Sbjct: 224 LWNISSAKFLKTYT 237
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWG---SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 558
+T GH+ Y + ++ + +VS S+D + +W+ ++ + + + VM A
Sbjct: 234 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 293
Query: 559 APSGSYVACGGLDNICSIYSLK 624
P+ + +A G LD I++ K
Sbjct: 294 HPTENLIASGSLDKTVRIWTQK 315
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 1/178 (0%)
Frame = +1
Query: 247 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 426
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE--EAKIVRTLTGHRSNCISV 107
Query: 427 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 606
+ S S D L +WD +H + V + P G +V GG DNI
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 607 SIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIXTGQQCG 777
++ L ++ E H G + F +L T S D T WD+ T + G
Sbjct: 168 KVWDLTAG----KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIG 221
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 1/178 (0%)
Frame = +1
Query: 247 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 426
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE--EAKIVRTLTGHRSNCISV 107
Query: 427 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 606
+ S S D L +WD +H + V + P G +V GG DNI
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 607 SIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIXTGQQCG 777
++ L ++ E H G + F +L T S D T WD+ T + G
Sbjct: 168 KVWDLTAG----KLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIG 221
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 55.6 bits (128), Expect = 4e-08
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 2/151 (1%)
Frame = +1
Query: 331 LAQATSNLEPIGRIQ-MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 507
LA A+S + + ++ + R GH + A+ + L S S D L +WD
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKG 133
Query: 508 KVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSC 687
+ S + T + P G +V GGLDN+ ++ L ++ E H G +
Sbjct: 134 CIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG----KLLHEFKFHEGPIRS 189
Query: 688 CRFLDDNQIL-TSSGDMTCALWDIXTGQQCG 777
F +L T S D T WD+ T + G
Sbjct: 190 LDFHPLEFLLATGSADRTVKFWDLETFELIG 220
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
+L GH + + ++ + S +++ + G + +WD V A S + P G
Sbjct: 53 SLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG 112
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCAL 747
++A G D I+ ++ ++G ++ + GHS +S RF D + + S G D +
Sbjct: 113 EFLASGSSDANLKIWDIR-KKGCIQTYK---GHSRGISTIRFTPDGRWVVSGGLDNVVKV 168
Query: 748 WDIXTGQQCGQF 783
WD+ G+ +F
Sbjct: 169 WDLTAGKLLHEF 180
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 397 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 576
RGH+ +Y + W +DSR L+S S+D L +W+ T +P + V ++P G
Sbjct: 399 RGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEK 458
Query: 577 VACGGLDNICSIY 615
V GG D + ++
Sbjct: 459 VVSGGKDRVLKLW 471
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Frame = +1
Query: 337 QATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 516
QA + P+ R +T+ GH + + + D + L S S D + +WD +T +
Sbjct: 90 QAVFRIRPVNRCS----QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF 145
Query: 517 AIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 696
+WV+T A++P G ++ G I ++G + S L GH +++ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSG--EICCWNPKKGELEGS-PLTGHKKWITGISW 202
Query: 697 ----LDD--NQILTSSGDMTCALWDI 756
L + +TSS D +WDI
Sbjct: 203 EPVHLSSPCRRFVTSSKDGDARIWDI 228
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL--RSSWVMTCAYAP 564
T +GH + + W D ++LVS S+ G++ W+ ++ PL W+ ++ P
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKK-GELEGSPLTGHKKWITGISWEP 204
Query: 565 SGSYVAC-----GGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 729
C D I+ + ++ + +S GH+ ++C ++ D I T S
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLS----GHTLAVTCVKWGGDGIIYTGSQ 260
Query: 730 DMTCALWDIXTGQ 768
D T +W+ G+
Sbjct: 261 DCTIKMWETTQGK 273
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +1
Query: 370 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 549
+ + ++ L GH + +++ D + + SAS D + +W+ T V V
Sbjct: 348 VSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQ 407
Query: 550 CAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 729
+++ + G D+ I+ ++T+ ++ ++LPGH+ + + D + + S G
Sbjct: 408 VSWSADSRLLLSGSKDSTLKIWEIRTK----KLKQDLPGHADEVFAVDWSPDGEKVVSGG 463
Query: 730 -DMTCALW 750
D LW
Sbjct: 464 KDRVLKLW 471
Score = 34.7 bits (76), Expect = 0.080
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 643 RVSRELPGHSGYLSCCRFLDDN-QILTSSGDMTCALWDIXT 762
R S+ + GH+ + C F D Q+ + SGD T LWD+ T
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT 140
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/124 (26%), Positives = 64/124 (51%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
L+GH +++ + S R +++A+ DG + +WD T V + SS +++ Y S
Sbjct: 935 LKGHDSQVSCVKMLSGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 574 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWD 753
+A G D + +I+ + R G + +L GH+ ++ R ++D ++T S D T +W
Sbjct: 994 ILAAAGRDTVANIWDI--RSG--KQMHKLKGHTKWIRSIRMVEDT-LITGSDDWTARVWS 1048
Query: 754 IXTG 765
+ G
Sbjct: 1049 VSRG 1052
Score = 41.9 bits (94), Expect = 5e-04
Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 12/170 (7%)
Frame = +1
Query: 289 NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGS---------- 438
N+ RK D + + T+ + +IQ R L+GH + A+H +
Sbjct: 807 NSFSRVRKWVSDNASSDITAAAQK--KIQTNVR-VLKGHGGAVTALHSVTRREVCDLVGD 863
Query: 439 --DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSI 612
D+ +S S D + +WD L+ A + + G D +
Sbjct: 864 REDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIV 923
Query: 613 YSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIXT 762
+ +T + + EL GH +SC + L ++LT++ D T +WD+ T
Sbjct: 924 WDKQTTQ----LLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVRT 969
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
R GH + A+ + L S S D L VWD+ + + + T ++P
Sbjct: 43 RAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPD 102
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCA 744
G +V GGLDN+ ++ L ++ E H G + F +L T S D T
Sbjct: 103 GRWVVSGGLDNVVKVWDLTAG----KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVK 158
Query: 745 LWDIXTGQQCG 777
WD+ T + G
Sbjct: 159 FWDLETFELIG 169
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
+L GH + + ++ + S+ +++ + G + +WD + V A S + P G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCAL 747
++A G D ++ + ++G ++ + GH+ +S F D + + S G D +
Sbjct: 62 EFLASGSSDTNLRVWDTR-KKGCIQTYK---GHTRGISTIEFSPDGRWVVSGGLDNVVKV 117
Query: 748 WDIXTGQQCGQF 783
WD+ G+ +F
Sbjct: 118 WDLTAGKLLHEF 129
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
L + S D + WD T + ++ V A+ P G + C GLD+ +YS
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC-GLDDGLKVYS 202
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTCAYAP 564
T H + A+H+ +D+ +L+SAS DG + WD + K + P +V A P
Sbjct: 386 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA-DP 444
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTC 741
SG V G LD+ I+ + G ++ L GH + F Q+L SS D T
Sbjct: 445 SGDVVCAGTLDSF-EIFVWSKKTGQIK--DILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 742 ALWDI 756
LWD+
Sbjct: 502 RLWDV 506
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTCAYAP 564
T H + A+H+ +D+ +L+SAS DG + WD + K + P +V A P
Sbjct: 426 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA-DP 484
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTC 741
SG V G LD+ I+ + G ++ L GH + F Q+L SS D T
Sbjct: 485 SGDVVCAGTLDSF-EIFVWSKKTGQIK--DILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 742 ALWDI 756
LWD+
Sbjct: 542 RLWDV 546
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 52.4 bits (120), Expect = 4e-07
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +1
Query: 343 TSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 522
T+ + + RIQ R + GHL+ + W + + + S D + +WD T V
Sbjct: 483 TARIWSMDRIQ--PLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 537
Query: 523 PLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 702
S V++ A +P G Y+A G D ++ L T R L GH+ + +
Sbjct: 538 IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST----ARCITPLMGHNSCVWSLSYSG 593
Query: 703 DNQILTS-SGDMTCALWDI 756
+ +L S S D T LWD+
Sbjct: 594 EGSLLASGSADCTVKLWDV 612
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/145 (24%), Positives = 61/145 (42%)
Frame = +1
Query: 334 AQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 513
A+ S+ + IG R+ L GH +Y+ + ++S+S D + +W + +
Sbjct: 394 AENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANL 453
Query: 514 HAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCR 693
+ V ++P G Y A D I+S+ ++ R + GH +
Sbjct: 454 VCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMD----RIQPLRIMAGHLSDVDW-- 507
Query: 694 FLDDNQILTSSGDMTCALWDIXTGQ 768
+ N I T S D T LWD+ TG+
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGE 532
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/102 (24%), Positives = 47/102 (46%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
R GH + + ++ D R + S +DG +++WD T + + +S V + +Y+
Sbjct: 535 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGE 594
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCR 693
GS +A G D ++ + T + + E G+S L R
Sbjct: 595 GSLLASGSADCTVKLWDV-TSSTKLTKAEEKNGNSNRLRSLR 635
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Frame = +1
Query: 382 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK--VHAIPLRSSWVMTCA 555
T R GH + ++ + +D+R +VSAS+D + +W++ K + WV
Sbjct: 97 TTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVR 156
Query: 556 YAPSG--SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 729
++P+ + D +++L+ N ++ L GHSGYL+ D + S G
Sbjct: 157 FSPNTLVPTIVSASWDKTVKVWNLQ----NCKLRNSLVGHSGYLNTVAVSPDGSLCASGG 212
Query: 730 -DMTCALWDIXTGQQ 771
D LWD+ G++
Sbjct: 213 KDGVILLWDLAEGKK 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Frame = +1
Query: 385 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
+R L GH + + SD + +S S DG+L +WD T + V++ A++
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST 115
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN---QILTSSGDM 735
+ D +++ E +S E GH ++SC RF + I+++S D
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTIS-EGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 736 TCALWDI 756
T +W++
Sbjct: 174 TVKVWNL 180
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/102 (28%), Positives = 48/102 (47%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
+VSAS D + VW+ +++ S ++ T A +P GS A GG D + ++ L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL--A 223
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDI 756
EG S L S S C F + L ++ + + +WD+
Sbjct: 224 EGKKLYS--LEAGSIIHSLC-FSPNRYWLCAATENSIRIWDL 262
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/84 (21%), Positives = 40/84 (47%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 558
+ R +L GH + + D S +DG +++WD K++++ S + + +
Sbjct: 184 KLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-AGSIIHSLCF 242
Query: 559 APSGSYVACGGLDNICSIYSLKTR 630
+P+ Y C +N I+ L+++
Sbjct: 243 SPN-RYWLCAATENSIRIWDLESK 265
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 652 RELPGHSGYLSCCRFLDDNQI-LTSSGDMTCALWDIXTGQQCGQF 783
R L GHS ++ D Q L+ S D LWD+ TG+ +F
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRF 101
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/132 (25%), Positives = 56/132 (42%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TL GH+ ++ + + + SA D ++ WD + + V A P+
Sbjct: 207 TLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTL 266
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 750
V GG D++C ++ ++T+ + V LP S S D Q++T S D T W
Sbjct: 267 DVVLTGGRDSVCRVWDIRTKM-QIFV---LPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Query: 751 DIXTGQQCGQFT 786
D+ G+ T
Sbjct: 323 DLRYGKSMATIT 334
Score = 36.3 bits (80), Expect = 0.026
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
R L+GHL + ++ + + + S D + +WD T + V A +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCA 744
+Y+ G D + L+ +V R GH + C + +LT D C
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQN----KVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 745 LWDIXTGQQ 771
+WDI T Q
Sbjct: 280 VWDIRTKMQ 288
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +1
Query: 373 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 552
Q + R+ GHL +Y + +++ +D VWD T ++ +P S V +
Sbjct: 243 QNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSV 301
Query: 553 AYAPSGSYVACGGLDNICSIYSLK 624
P+ V G D+ + L+
Sbjct: 302 LARPTDPQVITGSHDSTIKFWDLR 325
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 52.0 bits (119), Expect = 5e-07
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Frame = +1
Query: 322 DTSLAQATSNLEPIGRI-QMRTRRTL---RGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 489
D +LA A+ L+ + R+ +RT R++ +GH+ ++++++ + +L S +D + +W
Sbjct: 392 DGALA-ASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Query: 490 DSHTTNKVHAIPLRSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKTREGNVRVSRELPG 666
D ++ IP ++ V Y P G ++A D +I+S + + + + L G
Sbjct: 451 DLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR----DFSLVKSLAG 506
Query: 667 HSGYLSCCRFLDDNQ-ILTSSGDMTCALW 750
H ++ D+ I T S D T LW
Sbjct: 507 HESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 48.0 bits (109), Expect = 8e-06
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 579
GH +Y + + D S D VWD T + V + ++P+G ++
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 580 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LDDNQILTSSGDMTCALW 750
A GG DN C I+ L+ R+ ++ + +P H+ +S ++ + + T+S DM +W
Sbjct: 439 ASGGEDNQCRIWDLRMRK-SLYI---IPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Score = 41.5 bits (93), Expect = 7e-04
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 2/179 (1%)
Frame = +1
Query: 226 VTRVLIMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSN-LEPIGRIQMRTRRTLRG 402
VT++ M ++ + + K D + D LA A+++ + + +T G
Sbjct: 278 VTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEG 337
Query: 403 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 582
HL ++ + + + L + S D +WD +T ++ S V A+ G+ A
Sbjct: 338 HLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAA 397
Query: 583 CGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWDI 756
GLD++ ++ L+T R GH + F + L S G D C +WD+
Sbjct: 398 SCGLDSLARVWDLRTG----RSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 51.2 bits (117), Expect = 9e-07
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKT 627
LVS S D K+ VW + V I ++++ + Y P S +Y+A G D+ Y L+
Sbjct: 479 LVSGSDDCKVKVWCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRN 537
Query: 628 REGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDI 756
+ V GH +S +FL +N++ ++S D T LWD+
Sbjct: 538 ISQPLHV---FSGHKKAVSYVKFLSNNELASASTDSTLRLWDV 577
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Frame = +1
Query: 394 LRGHLAKIYAMHW-----GSDSRN----LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 546
LR H +IY + W G+++ N L SAS D + +WD+ + + V
Sbjct: 486 LREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVY 545
Query: 547 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 726
+ A++P+G Y+A G LD I+S+K EG ++ + G+ G C + N+I
Sbjct: 546 SLAFSPNGEYIASGSLDKSIHIWSIK--EG--KIVKTYTGNGGIFEVCWNKEGNKIAACF 601
Query: 727 GDMTCALWD 753
D + + D
Sbjct: 602 ADNSVCVLD 610
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TL H I+++ W L++ S D +VWD S + + +
Sbjct: 360 TLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNV 419
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS-SGDMTCAL 747
S+ A D++ IY K G R ++ GH G ++C ++ +L S S D T +
Sbjct: 420 SF-ATSSTDSM--IYLCKI--GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKI 474
Query: 748 WDI 756
W+I
Sbjct: 475 WNI 477
Score = 37.5 bits (83), Expect = 0.011
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 18/150 (12%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--------SHTTNKVHAIPL----- 528
R L GH +++ A W + L S S D +W HT ++A+ L
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKG 318
Query: 529 ----RSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 696
+S V T + G+ +A G D I++L N + L H G + ++
Sbjct: 319 KSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-----NGELISTLSKHKGPIFSLKW 373
Query: 697 -LDDNQILTSSGDMTCALWDIXTGQQCGQF 783
+ +LT S D T +WD+ + QF
Sbjct: 374 NKKGDYLLTGSVDRTAVVWDVKAEEWKQQF 403
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +1
Query: 373 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 552
+ R +T GH ++ + W L S S D +W+ + VH + + + T
Sbjct: 437 ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Query: 553 AYAPSG 570
++P+G
Sbjct: 497 RWSPTG 502
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TL GH+ ++ + + + SA D ++ WD + + S V A P+
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL--DDNQILTSSGDMTCA 744
+ GG D++C ++ ++T+ +++ L GH + C F D Q++T S D T
Sbjct: 273 DVLLTGGRDSVCRVWDIRTK---MQIF-ALSGHDNTV-CSVFTRPTDPQVVTGSHDTTIK 327
Query: 745 LWDIXTGQQCGQFT 786
WD+ G+ T
Sbjct: 328 FWDLRYGKTMSTLT 341
Score = 36.7 bits (81), Expect = 0.020
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
R ++GHL + ++ + + + S D + +WD T + V A +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCA 744
+Y+ G D + L+ +V R GH + C +L + G D C
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQN----KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 745 LWDIXTGQQ 771
+WDI T Q
Sbjct: 286 VWDIRTKMQ 294
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +1
Query: 373 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 552
Q + R+ GHL+ +Y + L++ +D VWD T ++ A+ + V +
Sbjct: 249 QNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV 308
Query: 553 AYAPSGSYVACGGLDNICSIYSLK 624
P+ V G D + L+
Sbjct: 309 FTRPTDPQVVTGSHDTTIKFWDLR 332
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-- 567
L+GH ++I + W SD+R L S D KL VW+ H+T V ++ V A++P
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 568 GSYVACGGLDNIC 606
G + GG + C
Sbjct: 348 GLLASGGGTADRC 360
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 370 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT-TNKVHAIPLRSSWVM 546
++ + RT+ GH ++ A+ W S L S S+D ++ D T + V + S +
Sbjct: 239 LRCKNIRTMEGHRLRVGALAWSSSV--LSSGSRDKSILQRDIRTQEDHVSKLKGHKSEIC 296
Query: 547 TCAYAPSGSYVACGGLDN 600
++ +A GG DN
Sbjct: 297 GLKWSSDNRELASGGNDN 314
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 430 WGSDSRNLVSAS--QDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNI 603
W + LVS ++IVW T +K+ + S V+ A +P G + G D
Sbjct: 386 WSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDET 445
Query: 604 CSIYSL 621
+++
Sbjct: 446 LRFWNV 451
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG- 570
L+GH I +HW SD +VSAS D + WD T ++ + SS+V +C G
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD-DNQILTSSGDMTCAL 747
+ G D ++ ++ R G ++ + ++ F D ++I T D +
Sbjct: 152 PLIISGSDDGTAKLWDMRQR-GAIQTFPD----KYQITAVSFSDAADKIFTGGVDNDVKV 206
Query: 748 WDIXTGQ 768
WD+ G+
Sbjct: 207 WDLRKGE 213
Score = 45.6 bits (103), Expect = 4e-05
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT---TNKV------HAIPLRSSWV 543
TL GH I M D L++ D KL VWD N+ H + +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKN-L 275
Query: 544 MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS 723
+ C+++P G+ V G D + I+ +R R +LPGH+G ++ C F I+ S
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSR----RTIYKLPGHTGSVNECVFHPTEPIIGS 331
Query: 724 -SGDMTCALWDI 756
S D L +I
Sbjct: 332 CSSDKNIYLGEI 343
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 535 SWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQ 711
S V T + P+G+ +A G D ++ + G+ + L GH + + D +Q
Sbjct: 54 SAVYTMKFNPAGTLIASGSHDREIFLWRV---HGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 712 ILTSSGDMTCALWDIXTGQQ 771
I+++S D T WD+ TG+Q
Sbjct: 111 IVSASPDKTVRAWDVETGKQ 130
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Frame = +1
Query: 412 KIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGG 591
+I A+ + + + + D + VWD + + + +P GSY+ G
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 592 LDNICSIYSLKTREGNVRVSRELPGH-----SGYLSCCRFLDDNQILTSSGDMTCALWD 753
+DN ++ ++ R + GH L C D ++ S D +WD
Sbjct: 242 MDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Score = 36.3 bits (80), Expect = 0.026
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK-VHAIPLRSSWVMTCAYAPSG 570
L GH + +Y M + + S S D ++ +W H K + + ++ + G
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCC-RFLDDNQILTSSGDMTCA 744
S + D + ++T + +++ HS ++ SCC I++ S D T
Sbjct: 109 SQIVSASPDKTVRAWDVETG----KQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 745 LWDI 756
LWD+
Sbjct: 165 LWDM 168
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SGSY 576
G+ I+++ + +D R +V+ S D + V+D +S V T +A SG+
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 577 VACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWD 753
+ G DN+C ++ + G + + L GH ++ D + S+G D T LWD
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 754 I 756
I
Sbjct: 347 I 347
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 48.8 bits (111), Expect = 5e-06
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCA 555
R R TL GH K+ A+ SR++VSA+ D + +WD H + + S+ C
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC- 364
Query: 556 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 732
+ G V G +D ++ ++T ++ E+ GHS + S + N+ILTS D
Sbjct: 365 LSIDGLTVFSGHMDGNLRLWDIQTG----KLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Query: 733 MTCALWDIXTGQQCG 777
++D T + CG
Sbjct: 421 NVHNVFDTRTLEICG 435
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D + S DG L +WD T + + SS V + + + +G+ + G DN+ +++
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 619 LKTRE--GNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIXTG 765
+T E G +R S S + C DD+ + S D + +W + G
Sbjct: 428 TRTLEICGTLRASGNRLA-SNWSRSCISPDDDYVAAGSADGSVHVWSLSKG 477
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Frame = +1
Query: 364 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN-KVHAIPLRSSW 540
G ++ L H + + + D S + + +VWD T K++ + ++
Sbjct: 342 GDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTAR 401
Query: 541 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILT 720
+ + A++P+ VA G +D +Y + + +R H G ++ F+DD + +
Sbjct: 402 INSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARN--AHLGGVNAVAFIDDCTVAS 459
Query: 721 SSGDMTCALWDI 756
S D + LW I
Sbjct: 460 SGEDASVRLWHI 471
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 492
GH IYA+ W DS+ +++ S D VW+
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 532 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ 711
S++V Y+P G+ D IY KT + ++ E GH G + + D++
Sbjct: 51 SNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASE-DGHKGSIYAVSWSPDSK 109
Query: 712 -ILTSSGDMTCALWDI 756
+LT S D + +W++
Sbjct: 110 RVLTVSADKSAKVWEV 125
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 576
GH + I + W + NL SA +DG+L++WD+ T H + + V ++ P +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEW 274
Query: 577 V-ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTSSG-DMTCAL 747
V A D+ +++ L+ + V + H G + + +++ +L SSG D +
Sbjct: 275 VLATASSDSTVALFDLRKLNAPLHV---MSSHEGEVFQVEWDPNHETVLASSGEDRRLMV 331
Query: 748 WDI 756
WD+
Sbjct: 332 WDL 334
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = +1
Query: 208 VPRELCVTRVLIMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTR 387
+P+ R+ + E++ R + K + A+ + C+ L + +
Sbjct: 104 IPKVEIRQRIRVDGEVNRARCMPQ--KPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPD 161
Query: 388 RTLRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTT 504
L GH + Y + W L+S SQD K+ +WD T
Sbjct: 162 LRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSAT 201
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 48.0 bits (109), Expect = 8e-06
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNK-------VHAIPLRSSWVMTCAYAPSGSYVACGGLD 597
D +V+A+ G VW S + +H + +S ++ C +P Y+A D
Sbjct: 179 DGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSD 238
Query: 598 NICSIYSLKTREGNVRVSRELPGHSGYLSCCRF-LDDNQILTSSGDMTCALWDIXTGQQ 771
I++L ++ + L GH ++ C F +D ++T+S D T LW + G++
Sbjct: 239 KTVKIWNLD----GFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKE 293
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/104 (21%), Positives = 39/104 (37%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
L+ H + I ++ L +AS D + +W+ + WV C ++ G
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 574 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 705
Y+ D ++S+ R G + + H CC L D
Sbjct: 273 YLVTASSDTTARLWSM--RAGKEEMVYQ--AHRKATVCCTLLRD 312
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHT-TNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY-SLK 624
L+S Q+G + VWD +P + + + G+ V C ++ SL
Sbjct: 140 LISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLC 199
Query: 625 TREGNVRVS--RELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDI 756
R+ +L H+ ++ C N+ L T+S D T +W++
Sbjct: 200 ERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNL 246
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Frame = +1
Query: 340 ATSNLEPIGRIQMRTRRTL----RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTT 504
A+SN E + ++ R L + H +++++ + S D L S S DG + +W +
Sbjct: 550 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 505 NKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 678
+ I +++ + C PS G +A G D+ +Y R + + + GH
Sbjct: 610 VSIGTIKTKAN--ICCVQFPSETGRSLAFGSADH--KVYYYDLRNPKLPLCTMI-GHHKT 664
Query: 679 LSCCRFLDDNQILTSSGDMTCALWDI 756
+S RF+D + +++SS D T LWD+
Sbjct: 665 VSYVRFVDSSTLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Frame = +1
Query: 340 ATSNLEPIGRIQMRTRRTL----RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTT 504
A+SN E + ++ R L + H +++++ + S D L S S DG + +W +
Sbjct: 550 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 505 NKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 678
+ I +++ + C PS G +A G D+ +Y R + + + GH
Sbjct: 610 VSIGTIKTKAN--ICCVQFPSETGRSLAFGSADH--KVYYYDLRNPKLPLCTMI-GHHKT 664
Query: 679 LSCCRFLDDNQILTSSGDMTCALWDI 756
+S RF+D + +++SS D T LWD+
Sbjct: 665 VSYVRFVDSSTLVSSSTDNTLKLWDL 690
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDT 114
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDM-TCAL 747
Y+ GG + I ++ L + + PG L+ D IL+S D+ L
Sbjct: 115 KYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLH--GDQTILSSCTDIGGVRL 172
Query: 748 WDIXTGQ 768
WD+ +G+
Sbjct: 173 WDVRSGK 179
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/119 (27%), Positives = 49/119 (41%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
LRGH + + S R +S S D + +WD +H + + V A PS S
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 574 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 750
+V GG D + L TRE + ++E P L DN I ++ D + W
Sbjct: 311 HVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQ------LALQDNSIWVATTDSSVERW 363
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +1
Query: 397 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 576
+GH +YA+ LVS + L VWD T +K + + V +G +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 577 VACGGLDNICSIYSL 621
G D++ ++ L
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/119 (27%), Positives = 49/119 (41%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
LRGH + + S R +S S D + +WD +H + + V A PS S
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 574 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 750
+V GG D + L TRE + ++E P L DN I ++ D + W
Sbjct: 311 HVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQ------LALQDNSIWVATTDSSVERW 363
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +1
Query: 397 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 576
+GH +YA+ LVS + L VWD T +K + + V +G +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 577 VACGGLDNICSIYSL 621
G D++ ++ L
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +1
Query: 241 IMNELDSLRQEAETLK---NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLA 411
I+N DS+R+ L+ N A+ D S T L + I M R GH
Sbjct: 208 IINFADSVRRRCSVLQWNPNVTTQIMVASDDDS--SPTLKLWDMRNI-MSPVREFTGHQR 264
Query: 412 KIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-GSYVAC 585
+ AM W SDS L++ ++D + I WD++T V +P ++W + P ++
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISA 324
Query: 586 GGLDNICSIYSLK 624
D IY+++
Sbjct: 325 SSFDGKIGIYNIE 337
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +1
Query: 241 IMNELDSLRQEAETLK---NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLA 411
I+N DS+R+ L+ N A+ D S T L + I M R GH
Sbjct: 208 IINFADSVRRRCSVLQWNPNVTTQIMVASDDDS--SPTLKLWDMRNI-MSPVREFTGHQR 264
Query: 412 KIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-GSYVAC 585
+ AM W SDS L++ ++D + I WD++T V +P ++W + P ++
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISA 324
Query: 586 GGLDNICSIYSLK 624
D IY+++
Sbjct: 325 SSFDGKIGIYNIE 337
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Frame = +1
Query: 364 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWD-SHTTNKVHAIPLRSS 537
G + +R + +GH+ + W ++ V ++S+DG L +WD ++ ++ I + +
Sbjct: 264 GDMYIRDLKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLA 323
Query: 538 W-----VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 702
V TCA+ G +A G D I+SLK G+ H+ ++ +F
Sbjct: 324 RPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSS 383
Query: 703 DNQILTS-SGDMTCALWDI 756
D +IL S S D + +WD+
Sbjct: 384 DGRILLSRSFDGSLKVWDL 402
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Frame = +1
Query: 382 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTC 552
TRR + GH + ++ + D+R +VSAS+D + +W++ K WV
Sbjct: 98 TRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 156
Query: 553 AYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 726
++P+ + D +++L N ++ L GH+GY+S D + S
Sbjct: 157 RFSPNTLQPTIVSASWDKTVKVWNL----SNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 212
Query: 727 G-DMTCALWDIXTGQQ 771
G D LWD+ G++
Sbjct: 213 GKDGVVLLWDLAEGKK 228
Score = 42.7 bits (96), Expect = 3e-04
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSHTTNKVHAIPLR-----SSWVMTC 552
T+R H + A+ D+ ++ VSAS+D +I+W +K + + R S +V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 553 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHS-GYLSCCRFLDDNQILTSSG 729
+ G + G D ++ L +R GH+ LS LD+ QI+++S
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGVS----TRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 730 DMTCALWD 753
D T LW+
Sbjct: 126 DRTIKLWN 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = +1
Query: 385 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
+R L GH + + SD + +S S DG+L +WD + V++ A++
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN---QILTSSGDM 735
+ D +++ E +S GH ++SC RF + I+++S D
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Query: 736 TCALWDI 756
T +W++
Sbjct: 175 TVKVWNL 181
Score = 35.5 bits (78), Expect = 0.046
Identities = 28/102 (27%), Positives = 46/102 (45%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
+VSAS D + VW+ + + +V T A +P GS A GG D + ++ L
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL--A 224
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDI 756
EG S L +S + C F + L ++ + +WD+
Sbjct: 225 EGKKLYS--LEANSVIHALC-FSPNRYWLCAATEHGIKIWDL 263
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 558
+ R TL GH + + D S +DG +++WD K++++ S C +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC-F 243
Query: 559 APSGSYVACGGLDNICSIYSLKTR 630
+P+ Y C ++ I+ L+++
Sbjct: 244 SPN-RYWLCAATEHGIKIWDLESK 266
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVW----DSHTTNK---VHAIPLRSSWVMTCAYAPSGSYVACGGLD 597
D +V+A+ G VW T + +H + + ++ C +P+ Y+A D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 598 NICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDIXTGQQ 771
I+++ ++ + L GH ++ C F D + L T+S DMT LW + G++
Sbjct: 233 KTVKIWNVD----GFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKE 287
Score = 31.1 bits (67), Expect = 0.99
Identities = 23/127 (18%), Positives = 52/127 (40%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
T H + A+ + D++ + S S+DG + +WD ++ V T P+
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAA-VNTVVLHPNQ 131
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 750
+ + G + ++ L+ + + E+ + S D ++ ++ TC +W
Sbjct: 132 TELISGDQNGNIRVWDLRANSCSCELVPEV--DTAVRSLTVMWDGTMVVAANNRGTCYVW 189
Query: 751 DIXTGQQ 771
+ G+Q
Sbjct: 190 RLLRGKQ 196
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 558
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 559 APSGSYVACGGLDNICSIYSLK 624
P YVA D C IY+ K
Sbjct: 104 DPLAKYVASLSSDRTCRIYANK 125
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 558
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 559 APSGSYVACGGLDNICSIYSLK 624
P YVA D C IY+ K
Sbjct: 163 DPLAKYVASLSSDRTCRIYANK 184
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 558
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 559 APSGSYVACGGLDNICSIYSLK 624
P YVA D C IY+ K
Sbjct: 163 DPLAKYVASLSSDRTCRIYANK 184
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 546
R+Q L GH +++ + W D R L S D +L+VW++H+ + + ++ V
Sbjct: 285 RVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVK 344
Query: 547 TCAYAP-SGSYVACGG 591
++P S +A GG
Sbjct: 345 AITWSPHQSSLLASGG 360
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP--S 567
L GH +++ + W D+R L S D +L VW+ H+T V ++ V A++P
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 568 GSYVACGGLDNIC 606
G + GG + C
Sbjct: 391 GLLASGGGTADRC 403
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCAYAP 564
RT+ GH ++ A+ WGS L S S+D ++ D + V + S V ++
Sbjct: 288 RTMEGHRLRVGALAWGSSV--LSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSY 345
Query: 565 SGSYVACGGLDN 600
+A GG DN
Sbjct: 346 DNRELASGGNDN 357
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 409 AKIYAMHWGSDSRNLVSAS--QDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 582
+++ + W + LVS ++IVW T +K+ + + V+ A +P G +
Sbjct: 422 SQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIV 481
Query: 583 CGGLDNICSIYSL 621
G D +++
Sbjct: 482 TGAGDETLRFWNV 494
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
++R K+ H+ SD + L SA D K ++W + T + ++ + ++PS
Sbjct: 646 SVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQ 705
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LDDNQILTSSGDMTCA 744
+A D ++ + ++R GHS ++ F + D+ I + D
Sbjct: 706 LRLATSSFDKTVRVWDADNKGYSLRT---FMGHSSMVTSLDFHPIKDDLICSCDNDNEIR 762
Query: 745 LWDIXTG 765
W I G
Sbjct: 763 YWSINNG 769
Score = 33.1 bits (72), Expect = 0.24
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +1
Query: 331 LAQATSNLEPIGRIQMRT-RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 507
LA +++NL + ++ + R +L+GH I ++ W L S S+D + VW T +
Sbjct: 792 LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGS 850
Query: 508 K---VHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 678
+ VH + + +C + P+ + G ++++ + + LP H G
Sbjct: 851 EGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENK-----TMTLPAHEGL 905
Query: 679 LSCCRFLDDNQILTS-SGDMTCALW 750
++ ++ S S D LW
Sbjct: 906 ITSLAVSTATGLVASASHDKLVKLW 930
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Frame = +1
Query: 385 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
+R + GH + + SD + +S S DG+L +WD T + V++ A++
Sbjct: 56 QRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN---QILTSSGDM 735
+ D +++ E +S E GH ++SC RF + I+++S D
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTIS-EADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 736 TCALWDI 756
T +W++
Sbjct: 174 TVKVWNL 180
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/102 (28%), Positives = 47/102 (46%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
+VSAS D + VW+ + + S ++ T A +P GS A GG D + ++ L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL--A 223
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDI 756
EG S L S S C F + L ++ + + +WD+
Sbjct: 224 EGKKLYS--LEAGSIIHSLC-FSPNRYWLCAATENSIRIWDL 262
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 558
+ R TL GH + + D S +DG +++WD K++++ S + + +
Sbjct: 184 KLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-AGSIIHSLCF 242
Query: 559 APSGSYVACGGLDNICSIYSLKTR 630
+P+ Y C +N I+ L+++
Sbjct: 243 SPN-RYWLCAATENSIRIWDLESK 265
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 652 RELPGHSGYLSCCRFLDDNQI-LTSSGDMTCALWDIXTGQQCGQF 783
R + GHS ++ D Q L+ S D LWD+ TG+ +F
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRF 101
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-----TTNKVHAIPLRSSWVMTCAY 558
L+GH + A + D ++ +D + +W+ H T K H +R V
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVT---- 69
Query: 559 APSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DM 735
+ + + +CGG D +Y G RV R+ GH G ++ +F D + ++ S+G D
Sbjct: 70 SDNAKFCSCGG-DR--QVYYWDVSTG--RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDR 124
Query: 736 TCALWD 753
+ +WD
Sbjct: 125 SLRVWD 130
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTC 552
R R RGH ++ A+ + S +VSA D L VWD SH+ V I VM+
Sbjct: 93 RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSV 152
Query: 553 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY-LSCCRFLDD-NQILTSS 726
+ + + G +D R ++R+ RE+ + G ++C +D N +L
Sbjct: 153 VL--TKTEIIGGSVDG-------TVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGC 203
Query: 727 GDMTCALWDIXTGQ 768
D T L D TG+
Sbjct: 204 LDSTLRLLDRTTGE 217
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/80 (20%), Positives = 30/80 (37%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
+T + H ++ +H SD+ S D ++ WD T + V + S
Sbjct: 54 KTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS 113
Query: 568 GSYVACGGLDNICSIYSLKT 627
S V G D ++ ++
Sbjct: 114 SSVVVSAGFDRSLRVWDCRS 133
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Frame = +1
Query: 424 MHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLR-------SSWVMTCAYAPSGSYVA 582
MHW VS+ + K I W S K H + LR S + A + G Y+A
Sbjct: 186 MHWD------VSSGKTDKYI-WPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLA 238
Query: 583 CGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSC-CRFLDDNQILTSSGDMTCALWDI 756
GG+D I+ ++TRE +V+ PGH +SC C +++ + S D T +W++
Sbjct: 239 TGGVDRHVHIWDVRTRE-HVQA---FPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNV 293
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 682 SCCRFLDDNQILTSSGDMTCALW 750
SCC F+ DN+ L+ S + T ALW
Sbjct: 351 SCC-FISDNEYLSGSDNGTVALW 372
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM-TCAYAPSGSYV 579
HL + + + ++R V++S D L VW+ + I M + + P+G+++
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 470
Query: 580 ACGGLDNICSIYSLKTREGNVRVSRELPGH--SGYLSCCRFLDDNQ-ILTSSGDMTCALW 750
A LDN IYS + R + + GH +GY F D + +++ G+ C W
Sbjct: 471 AAQSLDNQILIYSTRER-FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 529
Query: 751 D 753
D
Sbjct: 530 D 530
Score = 35.1 bits (77), Expect = 0.061
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +1
Query: 370 IQMRTRRTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWV 543
I R T GH + A+ + L+SA D K+ +WD + + K + + V
Sbjct: 270 IPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAV 329
Query: 544 MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ--IL 717
++ GS G D + +T G V +S G Y+ DD Q +L
Sbjct: 330 RDICFSNDGSKFLTAGYDKNIKYWDTET--GQV-ISTFSTGKIPYVVKLNPDDDKQNILL 386
Query: 718 TSSGDMTCALWDIXTGQ 768
D WDI TG+
Sbjct: 387 AGMSDKKIVQWDINTGE 403
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAP 564
RT GH + + + +D ++A D + WD+ T + + +V+
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 565 SGSYVACGGL-DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN-QILTSSGDMT 738
+ G+ D + + T E V++E H G ++ F+D+N + +TSS D +
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGE----VTQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 435
Query: 739 CALWD 753
+W+
Sbjct: 436 LRVWE 440
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +1
Query: 457 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCA--YAP-SGSYVACGGLDNICSIYSLKT 627
S S DG + +WD + C+ + P GS +A G D +Y ++
Sbjct: 185 SGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRR 244
Query: 628 REGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIXTGQQ 771
+ V L GH+ ++ RF+D + I+T S D + WDI G++
Sbjct: 245 LVDPLIV---LDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGRR 289
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Frame = +1
Query: 355 EPIGRIQ-MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLR 531
+P +Q M+ + LRGH +Y R +++ S D + VW T + +
Sbjct: 227 KPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Query: 532 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL---- 699
+ A + + ++A D + ++ L + VS L GH+G ++ F
Sbjct: 287 EGDITDLAVSSNNIFIASASNDCVIRVWRL---PDGLPVS-VLRGHTGAVTAIAFSPRPG 342
Query: 700 DDNQILTSSGDMTCALWDIXTGQ 768
Q+L+SS D TC +WD Q
Sbjct: 343 SPYQLLSSSDDGTCRIWDARGAQ 365
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
+L GH A Y M + R +SA DGK IVWD + + ++ ++P
Sbjct: 581 SLTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPD 640
Query: 568 GSYVACGGLDNICSIYSLKTREGN 639
G+ + D++ +Y L T +G+
Sbjct: 641 GTSIILS--DDVGQLYILSTGQGD 662
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = +1
Query: 373 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 552
+M+ + LRGH +Y + R +++ S D + +W T + + +
Sbjct: 294 KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDL 353
Query: 553 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN----QILT 720
A + + + VA D + ++ L + +S L GH+G ++ F Q+L+
Sbjct: 354 AVSSNNALVASASNDFVIRVWRL---PDGMPIS-VLRGHTGAVTAIAFSPRQASVYQLLS 409
Query: 721 SSGDMTCALWDIXTGQ 768
SS D TC +WD Q
Sbjct: 410 SSDDGTCRIWDARYSQ 425
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
L GH Y + + R +SA DGK I+WD + + ++ ++ G
Sbjct: 635 LTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDG 694
Query: 571 SYVACGGLDNICSIYSLKTREG 636
+ + D++ IY L T +G
Sbjct: 695 TSIVLS--DDVGQIYFLNTGQG 714
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 457 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREG 636
S+ D VWD T + V++ ++P+G ++A GG DN C I+ L+ R
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR-- 204
Query: 637 NVRVSRELPGHSGYLSCCRFLDDNQ--ILTSSGDMTCALW 750
++ +P H +S ++ + + T+S DM +W
Sbjct: 205 --KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIW 242
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +1
Query: 337 QATSNLEPIGRI-QMRTRRTL---RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 504
+A+S + + R+ +RT R + +GH+ ++ ++ + + +L S +D + +WD
Sbjct: 145 KASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR 204
Query: 505 NKVHAIPLRSSWVMTCAYAPSGSY-VACGGLDNICSIYS 618
++ IP + V Y P Y +A D +I+S
Sbjct: 205 KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
T GH +++ ++ SAS D +W++ T +++H+ V CA++
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDT 109
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL-DDNQILTSSGDM-TCA 744
+ GG++ I I+ L + +E+ G + +L DN IL+S D
Sbjct: 110 HRLLTGGMEKILRIFDLNRPDA---PPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIR 166
Query: 745 LWDI 756
LWDI
Sbjct: 167 LWDI 170
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 42.7 bits (96), Expect = 3e-04
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +1
Query: 418 YAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNKVHAIPLRSSWVMTCAYAPSGS-YV 579
Y H G+ + S S DG + VWD + V + S V + PSG V
Sbjct: 27 YTRHGGASTVG-ASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAV 85
Query: 580 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIX 759
A G D +Y ++ V + L GH+ +S RFLD ++T+ D LW +
Sbjct: 86 AVGCADRKGYVYDIRKL---VDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVE 142
Query: 760 TGQ 768
G+
Sbjct: 143 DGR 145
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDM-TCAL 747
+ GG + I ++ + + + PG L+ D IL+S D+ L
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLH--SDQTILSSCTDIGGVRL 172
Query: 748 WDIXTGQ 768
WD+ +G+
Sbjct: 173 WDVRSGK 179
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDM-TCAL 747
+ GG + I ++ + + + PG L+ D IL+S D+ L
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLH--SDQTILSSCTDIGGVRL 172
Query: 748 WDIXTGQ 768
WD+ +G+
Sbjct: 173 WDVRSGK 179
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN-KVHAIPLRSSWVMTCAYAPSG 570
L H I + + D SA + + +VWD + K+ + S+ + A++P+
Sbjct: 487 LERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNS 546
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 750
+ VA G LD +Y + + + R++ + H G + F DD+ +++S D +W
Sbjct: 547 TMVATGSLDTCVIVYEVD-KPASSRMTIK-GAHLGGVYGLGFADDSHVVSSGEDACIRVW 604
Score = 34.7 bits (76), Expect = 0.080
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 532 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN- 708
S++V +AP GS D IY KT E +S + GH G + + D
Sbjct: 187 SNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSD-DGHKGSIYAVSWSPDGK 245
Query: 709 QILTSSGDMTCALWDI 756
Q+LT S D + +WDI
Sbjct: 246 QVLTVSADKSAKIWDI 261
Score = 32.7 bits (71), Expect = 0.32
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 492
GH IYA+ W D + +++ S D +WD
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
RT GH + AM W SDS L++ +D + I W++ T V +P +W + P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 565 S-GSYVACGGLDNICSIYSLK 624
++ +D IY+L+
Sbjct: 306 KMPGVISASSVDGKIGIYNLE 326
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
++++ G + +W+ T + + V + + P +V G D +Y+ T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIXTGQQCGQ 780
+ V+V HS Y+ C +L+SS DM LWD G C Q
Sbjct: 90 D-KVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQ 136
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
++++ G + +W+ T + + V + + P +V G D +Y+ T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIXTGQQCGQ 780
+ V+V HS Y+ C +L+SS DM LWD G C Q
Sbjct: 90 D-KVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQ 136
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
++++ G + +W+ T + + V + + P +V G D +Y+ T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIXTGQQCGQ 780
+ V+V HS Y+ C +L+SS DM LWD G C Q
Sbjct: 90 D-KVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQ 136
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TLRGH A + ++W D L S S D + +W+ T + S V + P G
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 571 SYVACGGLDNICSIY 615
S++A D I+
Sbjct: 173 SFIASQSDDKTVIIW 187
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPLRSSWVMTCA 555
LRGHL+ + + W + S S D +I+W +H T+ A L S++
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLG 215
Query: 556 YAPSGSYV 579
++P G ++
Sbjct: 216 WSPCGHFL 223
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWV--MTCAYAP 564
TL H A++ A+ ++ VSAS DG +D + + + + S V A+ P
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 744
G + G ++ I+ +K+ + NV + GH+G ++ F ++ L ++ +
Sbjct: 364 DGLILGTGTSQSVVKIWDVKS-QANVA---KFDGHTGEVTAISFSENGYFLATAAEDGVR 419
Query: 745 LWDI 756
LWD+
Sbjct: 420 LWDL 423
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYA 561
TL GH K+ ++ + DS +++AS D + +W + + + S+ V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 562 PSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMT 738
P+ Y LD Y L + +VS + + + F D IL T +
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD--SKNVDYTAAAFHPDGLILGTGTSQSV 376
Query: 739 CALWDIXTGQQCGQF 783
+WD+ + +F
Sbjct: 377 VKIWDVKSQANVAKF 391
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWV--MTCAYAP 564
TL H A++ A+ ++ VSAS DG +D + + + + S V A+ P
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 744
G + G ++ I+ +K+ + NV + GH+G ++ F ++ L ++ +
Sbjct: 364 DGLILGTGTSQSVVKIWDVKS-QANVA---KFDGHTGEVTAISFSENGYFLATAAEDGVR 419
Query: 745 LWDI 756
LWD+
Sbjct: 420 LWDL 423
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYA 561
TL GH K+ ++ + DS +++AS D + +W + + + S+ V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 562 PSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMT 738
P+ Y LD Y L + +VS + + + F D IL T +
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD--SKNVDYTAAAFHPDGLILGTGTSQSV 376
Query: 739 CALWDIXTGQQCGQF 783
+WD+ + +F
Sbjct: 377 VKIWDVKSQANVAKF 391
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 732
+ P + GG D + I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK-LLKQSDEEVGHKKDITSLCKAADDSHFLTGSLD 214
Query: 733 MTCALWDIXT 762
T LWD+ T
Sbjct: 215 KTAKLWDMRT 224
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 732
+ P + GG D + I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK-LLKQSDEEVGHKKDITSLCKAADDSHFLTGSLD 214
Query: 733 MTCALWDIXT 762
T LWD+ T
Sbjct: 215 KTAKLWDMRT 224
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 732
+ P + GG D + I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK-LLKQSDEEVGHKKDITSLCKAADDSHFLTGSLD 214
Query: 733 MTCALWDIXT 762
T LWD+ T
Sbjct: 215 KTAKLWDMRT 224
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 397 RGHLAK--IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
R H+ + I ++ + +D L + +DG L ++D T V + ++ CA++ G
Sbjct: 298 RWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDG 357
Query: 571 SYVACGGLDNICSIYSLKTRE 633
Y+ GG D++ ++S++ R+
Sbjct: 358 KYLLTGGEDDLVQVWSMEDRK 378
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
LRGH ++ + + + LVS+S+D L VWD T + + + S V + P
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 574 YVACGGLDNICSIYSLKTREGN 639
YV G D Y++K N
Sbjct: 204 YVVTGSADQELRFYAVKEYSSN 225
Score = 33.9 bits (74), Expect = 0.14
Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 2/177 (1%)
Frame = +1
Query: 229 TRVLIMNELDSLRQEAETLKNAIR-DARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGH 405
T+ L ++ + S++ + L AI DA+ A +A S ++ ++ +L GH
Sbjct: 526 TKKLTVSNVKSMKMNDDVLAVAISPDAKHIA----VALLDSTVKVFYMDSLKFYLSLYGH 581
Query: 406 LAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVAC 585
+ + SD +V+ SQD L +W + +I VM + + Y+
Sbjct: 582 KLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFS 641
Query: 586 GGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWD 753
G D + + E + L GH + C + L T S D + WD
Sbjct: 642 IGKDRLVKYWDADKFEHLL----TLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 550 CAYAPSGSY--VACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTS 723
C AP S +A +N YSLK+ E V+ E GH + +DN +L S
Sbjct: 364 CPTAPKESLGTLALSLNNNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMS 423
Query: 724 SGDMTCALWDIXTG 765
+ +W+ TG
Sbjct: 424 TSHSEVKIWNPSTG 437
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +1
Query: 436 SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 615
S S L++A+ D K+ V+D+ + +V L S V + +P G +A G C I
Sbjct: 217 SGSLRLITANNDCKIRVFDAQSFTRVSEFALDWS-VNNTSVSPDGKLLAVVGDSTECLIS 275
Query: 616 SLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDI 756
+ G V S L GH Y + + IL T + D C LWDI
Sbjct: 276 D--SHSGKVISS--LRGHKDYSFASAWHPNGLILATGNQDTACRLWDI 319
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Frame = +1
Query: 418 YAMHWGSDSRNLVSASQDGKLI----------VWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
+A+ W S N S S DGKL+ + DSH+ + ++ + A+ P+
Sbjct: 245 FALDW---SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPN 301
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 717
G +A G D C ++ ++ + V L G+ G + +F + + L
Sbjct: 302 GLILATGNQDTACRLWDIRNPSESFAV---LKGNMGAIRGLKFTPEGRFL 348
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Frame = +1
Query: 535 SWVMTCAYAPSGSYVACGGLD-NI-CSIYSLKTREGNVRVSRELPGHSGYLSCCRF---- 696
S + + ++P G Y+ D I +++ K EG + GHS +++C F
Sbjct: 156 SIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTP 215
Query: 697 -LDDNQILTSSGDMTCALWDIXTG 765
L +++ SGD T LWDI +G
Sbjct: 216 ELTQGYLMSGSGDSTVRLWDITSG 239
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +1
Query: 385 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
+ TL GH + A+ W D R +++ + + WD + + VH ++C + P
Sbjct: 312 KHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYP 371
Query: 565 SGSYVACGGLDNICSIYSLKTRE 633
G + G D ++ L RE
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGRE 394
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW----DSHTTNKVHAIPLRS 534
+I +T + L H +++ + + + + L S+S+D I+W D H + K H +
Sbjct: 261 QIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLK-HTLVGHH 319
Query: 535 SWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQI 714
V+ ++P V G + + + + + G+ E G S +SC + D I
Sbjct: 320 KPVIAILWSPDDRQVLTCGAEEVIRRWDVDS--GDCVHMYEKGGISP-ISCGWYPDGQGI 376
Query: 715 LTSSGDMTCALWDI 756
+ D + +WD+
Sbjct: 377 IAGMTDRSICMWDL 390
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Frame = +1
Query: 469 DGKLIVWDSHTTNKVHAIPLRSSWVMTC--------AYAPSGSYVACGGLDNICSIYSLK 624
D L ++ H K H IP +++ ++ ++ +G Y+A D I+ +
Sbjct: 246 DSDLSLYSDHQCGK-HQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEIS 304
Query: 625 TREGNVRVSRELPGH-SGYLSCCRFLDDNQILTSSGDMTCALWDIXTG 765
+G++ + L GH ++ DD Q+LT + WD+ +G
Sbjct: 305 A-DGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG 351
Score = 31.1 bits (67), Expect = 0.99
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 541 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN--QI 714
+ +C +++A G D+ I+ T G + V ELPGH+G ++C + N +
Sbjct: 492 IRSCFGGYKQAFIASGSEDSQVYIWHRST--GKLIV--ELPGHAGAVNCVSWSPTNLHML 547
Query: 715 LTSSGDMTCALWDIXTGQQCGQ 780
++S D T +W + Q Q
Sbjct: 548 ASASDDGTIRIWGLDRINQQNQ 569
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
++++ G L +W+ T V + + V + + +V G D +Y+ T
Sbjct: 30 ILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTM 89
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDD-NQILTSSGDMTCALWDIXTGQQCGQ 780
+ ++V H+ Y+ C +L+SS DM LWD G C Q
Sbjct: 90 D-KIKV---FEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQ 136
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +1
Query: 391 TLRGHLAKIYAMHW--GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
TL HL + + + G D L++ S D VWD T + V + + V ++ P
Sbjct: 180 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Query: 565 SGSYVACGGLDNICSIYSLKT 627
+ G D I+ T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
L GH + ++ + D R L S S DG + + D+ + ++ +SWV++ +P G
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 571 SYVACGGLDNICSIYSLKTR 630
+A G D ++ LK R
Sbjct: 256 GAIATGSSDRTVRLWDLKMR 275
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 538 WVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD-DNQI 714
+V++ A++P+G +ACG +D ++ + ++ +L GH+ + F D ++
Sbjct: 160 FVLSVAWSPNGKRLACGSMDGTICVFDV----DRSKLLHQLEGHNMPVRSLVFSPVDPRV 215
Query: 715 LTSSGD 732
L S D
Sbjct: 216 LFSGSD 221
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV-ACGGLDNICSIYSLKT 627
L S S D + +W+ + N + I ++ V ++P S++ A G D Y L+
Sbjct: 812 LASGSDDCSVKLWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLR- 869
Query: 628 REGNVRVSR-ELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDI 756
N+R L GH+ +S +FLD+ ++T+S D T LWD+
Sbjct: 870 ---NLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDL 910
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRN--LVSASQDGKLIVWDSHTTN---KVHAIPLRSSWVMTCA 555
TL GH ++ + W L S S DG++I+W N + H V + A
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 556 YAPS--GSYVACGGLDNICSIYSLKTREG 636
+AP G +ACG D S++S + G
Sbjct: 111 WAPHELGLSLACGASDGNISVFSARADGG 139
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGD 732
+ P + GG D I+ +T + ++ S E GH + S C+ DD+ LT S D
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGK-LLKQSDEEVGHKEAITSLCKAADDSHFLTGSHD 241
Query: 733 MTCALWDIXT 762
T LWD+ T
Sbjct: 242 KTAKLWDMRT 251
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRN--LVSASQDGKLIVWDSHTTN---KVHAIPLRSSWVMTCA 555
TL GH ++ + W L S S DG++I+W N + H S V + A
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 556 YAPS--GSYVACGGLDNICSIYSLKTREG 636
+AP G +ACG D S+++ + G
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGG 139
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 1/139 (0%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 546
R++++ + R K +H ++++ G L +W+ T + + V
Sbjct: 4 RLEIKRKLAQRSERVKSVDLH--PTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVR 61
Query: 547 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQILTS 723
+ + +V G D +Y+ T + V+V HS Y+ C +L+S
Sbjct: 62 SAKFVARKQWVVAGADDMYIRVYNYNTMD-KVKV---FEAHSDYIRCVAVHPTLPYVLSS 117
Query: 724 SGDMTCALWDIXTGQQCGQ 780
S DM LWD G C Q
Sbjct: 118 SDDMLIKLWDWEKGWACTQ 136
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
+TL GH + A+ + + +++ S+DG + +W + T + + V Y S
Sbjct: 223 QTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKS 282
Query: 568 GSYVACG 588
V G
Sbjct: 283 SRRVVIG 289
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +1
Query: 283 LKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIY--AMHWGSDSRNLV 456
++N + +A +S TS +P G I M+ R ++ A G +
Sbjct: 579 MENTVDNASSGTASSSQNDRTS-YQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIA 637
Query: 457 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYA-PSGSYVACGGLDNICSIYS 618
S S DG+ +W+ T ++ + + V+ C P S VA G+DN I+S
Sbjct: 638 SGSDDGRWFIWEKQ-TGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWS 691
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 373 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 522
++ + L GH + A+ W S+ L+S S D ++ +W+ + +H+I
Sbjct: 39 RLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSI 88
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 38.7 bits (86), Expect = 0.005
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Frame = +1
Query: 340 ATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA 519
A ++++ + +T T GH A + + D+ LV+ S+D +++W H K
Sbjct: 2646 ADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH---KAFT 2702
Query: 520 IPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR-EGNVRVSRELPGHSGYLSCCRF 696
S T + APS + + L N + K R EG ++V R GH L CC
Sbjct: 2703 SRTSVSEPSTGSGAPSST--SNTNLANTLANKGKKCRLEGPIQVLR---GHRRELVCCCV 2757
Query: 697 LDDNQILTSSGDMTCAL 747
D ++ SS + + L
Sbjct: 2758 SSDQGVVVSSSESSDVL 2774
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQ-DGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
T GH ++YA+ LV+ D K +W + +P V A++
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 568 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCAL 747
G +A GGLD + I+ + G ++ + PG + R+ I+ +G C+L
Sbjct: 125 GQLLASGGLDGVVQIFDASS--GTLKCVLDGPGAG--IEWVRWHPRGHIVL-AGSEDCSL 179
Query: 748 W 750
W
Sbjct: 180 W 180
Score = 38.3 bits (85), Expect = 0.007
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +1
Query: 505 NKVHAIPLRSSWVMTCAYAPS-GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL 681
+ VH + A +P+ + VA GG D+ ++ + GN + ELPGH +
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKI----GNGDWAAELPGHKDSV 116
Query: 682 SCCRFLDDNQILTSSG-DMTCALWDIXTG 765
SC F D Q+L S G D ++D +G
Sbjct: 117 SCLAFSYDGQLLASGGLDGVVQIFDASSG 145
Score = 35.9 bits (79), Expect = 0.035
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI---PLRSSWVMTCAYAPSG 570
GH + + D + + + S D LIVW+ T +H + P + +TC S
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEG-LTCLDINSN 253
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL----TSSGDMT 738
S +A G + S++ + G +V L H+ + C +F + + T D
Sbjct: 254 SSLAISGSKD-GSVHIVNIVTG--KVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKK 310
Query: 739 CALWDI 756
+WD+
Sbjct: 311 LIIWDL 316
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/82 (20%), Positives = 35/82 (42%)
Frame = +1
Query: 370 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 549
+Q T R + H + ++ W S+ L + +G + +WDS N VH V
Sbjct: 316 LQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQA 375
Query: 550 CAYAPSGSYVACGGLDNICSIY 615
+ + + ++ +DN ++
Sbjct: 376 ISVSTNTDFIVSVSVDNTARVF 397
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 397 RGHLAK--IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
R H+ + I ++ + +D +L + +DG L ++D T V ++ C+++ G
Sbjct: 298 RWHICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDG 357
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN 708
Y+ GG D++ ++S++ R +V GH+ ++S F D N
Sbjct: 358 KYILTGGEDDLVQVWSMEDR----KVVAWGEGHNSWVSGVAF-DSN 398
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 528
RI+ T RGH ++ + W + L S D + +WD + TT +H +
Sbjct: 253 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 312
Query: 529 RSSWVMTCAYAP-SGSYVACGG 591
+S V A+ P + +A GG
Sbjct: 313 HTSAVKALAWCPFQANLLATGG 334
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +1
Query: 415 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP-LRSSWVMTCAYAPSGSYVACGG 591
+ +++W D R++ + ++ +WDS + ++ + S V + A+ + + GG
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW--NNHILTTGG 242
Query: 592 LDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWD 753
+D + ++ R V R GH+ + ++ Q L S G D +WD
Sbjct: 243 MDGLIINNDVRIRSPIVETYR---GHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 528
RI+ T RGH ++ + W + L S D + +WD + TT +H +
Sbjct: 243 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 302
Query: 529 RSSWVMTCAYAP-SGSYVACGG 591
+S V A+ P + +A GG
Sbjct: 303 HTSAVKALAWCPFQANLLATGG 324
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +1
Query: 415 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP-LRSSWVMTCAYAPSGSYVACGG 591
+ +++W D R++ + ++ +WDS + ++ + S V + A+ + + GG
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW--NNHILTTGG 232
Query: 592 LDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWD 753
+D + ++ R V R GH+ + ++ Q L S G D +WD
Sbjct: 233 MDGLIINNDVRIRSPIVETYR---GHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.5 bits (83), Expect = 0.011
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Frame = +1
Query: 349 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH--AI 522
NL IQ +L G + ++Y++ G+D L + +QDG ++VW ++T A
Sbjct: 204 NLVKAWNIQNNADLSLNGPVGQVYSLVVGTDL--LFAGTQDGSILVWRYNSTTSCFDPAA 261
Query: 523 PLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 702
L + + + + G +DN ++SL N++ + L H+ +
Sbjct: 262 SLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSL----DNLQCIQTLTEHTSVVMSL-ICW 316
Query: 703 DNQILTSSGDMTCALWDIXTG 765
D +L+ S D T +W G
Sbjct: 317 DQFLLSCSLDNTVKIWAATEG 337
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +1
Query: 349 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 528
+L PIG +Q L G +H + ++ SQ+G L +W+ +T ++
Sbjct: 126 HLAPIGNLQ------LTGKFTPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYQFKG 179
Query: 529 RSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN 708
S V +C +P+ VA G D ++++K E V G ++ F D
Sbjct: 180 WGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEH---ASRGAVTALSFSTDG 236
Query: 709 QILTSSGDM--TCALWDI 756
+ L +SG ++W++
Sbjct: 237 RPLLASGGSFGVISIWNL 254
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +1
Query: 415 IYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAI-PLRSSWVMTCAYAPSGSYVACG 588
+ A+ + +D R L+ S G + +W+ + I S +++ + + +
Sbjct: 227 VTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSA 286
Query: 589 GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTCALWDIXTG 765
DN ++ T +G+ R+ R GHS C RF + + + S+G D L+ +
Sbjct: 287 SADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQE 346
Query: 766 QQ 771
QQ
Sbjct: 347 QQ 348
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 370 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 492
+ ++ R RGH +I + + D + ++S+S DG L +WD
Sbjct: 545 VTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 364 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 516
GR+ ++ +L GH +++ M W L S DG + +W S+ + H
Sbjct: 266 GRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWH 316
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 505 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 684
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 499 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 554
Query: 685 CCRFLDDN-QILTSSGDMTCALWD 753
RF ++ Q+ TSS D T +WD
Sbjct: 555 DVRFRPNSTQLATSSFDKTIKIWD 578
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 331 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 504
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 648 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 706
Query: 505 NKVHAIPLRSSWVMTCAYAPS 567
+ +H + + + + PS
Sbjct: 707 DCIHELSNSGNKFHSVVFHPS 727
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 505 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 684
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 685 CCRFLDDN-QILTSSGDMTCALWD 753
RF ++ Q+ TSS D T +WD
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWD 580
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 331 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 504
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 505 NKVHAIPLRSSWVMTCAYAPS 567
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 505 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 684
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 685 CCRFLDDN-QILTSSGDMTCALWD 753
RF ++ Q+ TSS D T +WD
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWD 580
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 331 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 504
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 505 NKVHAIPLRSSWVMTCAYAPS 567
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 505 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 684
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 685 CCRFLDDN-QILTSSGDMTCALWD 753
RF ++ Q+ TSS D T +WD
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWD 580
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 331 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 504
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 505 NKVHAIPLRSSWVMTCAYAPS 567
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.7 bits (81), Expect = 0.020
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 505 NKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 684
N+V I +S V+ C+++ G +A G D I++++T ++V H+ ++
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET----LQVESTPEEHAHIIT 556
Query: 685 CCRFLDDN-QILTSSGDMTCALWD 753
RF ++ Q+ TSS D T +WD
Sbjct: 557 DVRFRPNSTQLATSSFDKTIKIWD 580
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 331 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 504
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 505 NKVHAIPLRSSWVMTCAYAPS 567
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 36.7 bits (81), Expect = 0.020
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRN-------LVSASQDGKLIVWDSHT-----TNKVHAIPLRSS 537
L GH +++++ W S + L S S D + +W+ + T K +
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 538 WVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 717
V +CA++PSG +A D I+ K L GH + + L
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIW--KNYGSEFECISTLEGHENEVKSVSWNASGSCL 133
Query: 718 -TSSGDMTCALWDIXTGQQ 771
T S D + +W++ G +
Sbjct: 134 ATCSRDKSVWIWEVLEGNE 152
Score = 31.5 bits (68), Expect = 0.75
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 8/128 (6%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL---RSSWVMTCAYA 561
TL GH ++ ++ W + L + S+D + +W+ N+ + + V +
Sbjct: 113 TLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Query: 562 PSGSYVACGGLDNICSIYSLKTREGNVRVSREL----PGHSGYLSCCRF-LDDNQILTSS 726
P+ + DN ++ + +G + + L GHS + F ++++T S
Sbjct: 173 PTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCS 232
Query: 727 GDMTCALW 750
D+T +W
Sbjct: 233 DDLTLKIW 240
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 541 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS--CCRFLDDNQI 714
V + A+ +G+ +A G +D I++++ + EL GH+ + C + +
Sbjct: 23 VHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLV 82
Query: 715 LTSSGDMTCALWDIXTGQQCGQ 780
T+SGD + LWD +G +C Q
Sbjct: 83 ATASGDKSVRLWDARSG-KCTQ 103
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW--DSHTTNKVHAIPLR 531
R +GH K++++ W S+ L S S D +W + H +K + L+
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELK 63
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 541 VMTC-AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 717
V+ C A+ GS +A G D C I+ +TR G + R+ + S +++L
Sbjct: 25 VIKCVAFNHRGSLLAAGCADGGCVIWDFETR-GIAKEIRDNDCSAAITSVSWSKYGHRLL 83
Query: 718 TSSGDMTCALWDIXTGQQ 771
S+ D + LWD+ TG++
Sbjct: 84 VSAADKSLTLWDVSTGEK 101
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 36.3 bits (80), Expect = 0.026
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 460 ASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTRE 633
+S D L+ S V +++ + C PS G +A G D+ +Y R
Sbjct: 635 SSADPTLLASGSDDGTGVSIGTIKTKANVCCVQFPSDSGRSLAFGSADH--KVYYYDLRN 692
Query: 634 GNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDI 756
+ + + GHS +S +F+D + +++SS D T LWD+
Sbjct: 693 PKIPLCTMI-GHSKTVSYVKFVDSSTLVSSSTDNTLKLWDL 732
Score = 27.9 bits (59), Expect = 9.2
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMT-----C 552
T+ GH + + + DS LVS+S D L +WD S + + ++ PL S T
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFV 757
Query: 553 AYAPSGSYVACGGLDNICSIY 615
+ S Y+A G N +Y
Sbjct: 758 GLSVSDGYIATGSETNEVFVY 778
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TL GHL I + + ++ +VSAS D + +W+ + + + + +VM ++ P
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
Query: 571 SYVACGGLDNICSIYSL 621
V LD ++ +
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 31.9 bits (69), Expect = 0.56
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TLRGH+ + ++ + + +VS S+D + VWD+ + A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEI 302
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL 699
+ +A G DN ++ L+ RE R + L G S + + RFL
Sbjct: 303 NLLAAGH-DNGMIVFKLE-RE---RPAFALSGDSLFYAKDRFL 340
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 36.3 bits (80), Expect = 0.026
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 382 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT---C 552
+R TL+ H A++ A+ + ++ VSAS D +D + + + S +
Sbjct: 301 SRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAA 360
Query: 553 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGD 732
A+ P G + G +I I+ +K+ + NV + GH+G ++ F ++ L ++
Sbjct: 361 AFHPDGLILGTGTAQSIVKIWDVKS-QANVA---KFGGHNGEITSISFSENGYFLATAAL 416
Query: 733 MTCALWDI 756
LWD+
Sbjct: 417 DGVRLWDL 424
Score = 35.9 bits (79), Expect = 0.035
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 5/136 (3%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW----DSHTTNKVHAIPLRSSWVMTCAY 558
TL GH K+ ++ + D+ +++AS D + +W D + T++ H + S+ V
Sbjct: 259 TLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR-HTLKDHSAEVRAVTV 317
Query: 559 APSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDM 735
+ Y LD+ Y L + +V+ Y + F D IL T +
Sbjct: 318 HATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNY-TAAAFHPDGLILGTGTAQS 376
Query: 736 TCALWDIXTGQQCGQF 783
+WD+ + +F
Sbjct: 377 IVKIWDVKSQANVAKF 392
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 35.9 bits (79), Expect = 0.035
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 579
H + I A W S +L+SAS DGK+++WD T + I + V++ + G V
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWW-KGESV 415
Query: 580 ACGGLDNICSIYS 618
GG D+ I S
Sbjct: 416 VSGGADSNLRISS 428
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW--VMTC 552
+T TL GHL +A W D + +QD VWD +K A+ LR + + +
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAV-LRGNLGAIRSI 366
Query: 553 AYAPSGSYVACGGLDNICSIYSL 621
Y G Y+A + +Y +
Sbjct: 367 RYTSDGKYMAMAEPADFVHVYDV 389
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/82 (21%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TL+GH +I+++ + + + +++AS D + +W + + +S V+ ++ G
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 571 S-YVACGGLDNICSIYSLKTRE 633
+ +V+CG D + ++++ T E
Sbjct: 596 TQFVSCGA-DGLLKLWNVNTSE 616
Score = 34.7 bits (76), Expect = 0.080
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
+T GH + + + +D VS DG L +W+ +T+ + V A
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Query: 568 GSYVACGGLDNICSIY 615
+A GG D + +++
Sbjct: 637 TEMIATGGGDAVINLW 652
Score = 32.7 bits (71), Expect = 0.32
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 567
R+ +GH + M + L +A D K++VWD H V + + P
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 568 G--SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMT 738
+ + G D ++ L + + + H ++ +D L S+G D
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 739 CALWDI 756
LWD+
Sbjct: 216 VNLWDL 221
Score = 32.3 bits (70), Expect = 0.43
Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNL-VSASQDGKLIVW--DSHTTNKVHAIPLRSSWVMTC------ 552
GH I A+ + S + VS S D L VW D + + I L++ V+
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDIN 503
Query: 553 --AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ-ILTS 723
A A + S V G D SI+ L V L GH + F +Q ++T+
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVT----LKGHKRRIFSVEFSTVDQCVMTA 559
Query: 724 SGDMTCALWDIXTG 765
SGD T +W I G
Sbjct: 560 SGDKTVKIWAISDG 573
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TL GHL I + + + +VSAS D + +W+ + V + + +VM ++ P
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE 147
Query: 571 SYVACGGLDNICSIYSL 621
V LD ++ +
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 570
TLRGH+ + ++ + + +VS S+D + VWD+ + A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEM 302
Query: 571 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL 699
+ +A G D+ ++ L+ RE R + L G S + + RFL
Sbjct: 303 NLLAAGH-DSGMIVFKLE-RE---RPAFALSGDSLFYAKDRFL 340
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 35.5 bits (78), Expect = 0.046
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
RT + H +Y W ++ SAS D L +WD IP +++C +
Sbjct: 143 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNK 202
Query: 565 -SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ--ILTSSGDM 735
+A +D ++ +++ + V L GH + +F + I + S DM
Sbjct: 203 YDDCILATSSVDKTVKVWDVRSYRVPLAV---LNGHGYAVRKVKFSPHRRSLIASCSYDM 259
Query: 736 TCALWD 753
+ LWD
Sbjct: 260 SVCLWD 265
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Frame = +1
Query: 388 RTLRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
R+ + H ++ ++ + R+ +++S D + +W V + V + P
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 565 S-GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF--LDDNQILTSSGDM 735
G A D I+ ++ G+ + +P H + C + DD + TSS D
Sbjct: 160 KHGDVFASASGDCTLRIWDVR-EPGSTMI---IPAHDFEILSCDWNKYDDCILATSSVDK 215
Query: 736 TCALWDI 756
T +WD+
Sbjct: 216 TVKVWDV 222
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D +S S DGK+ +WD V +R C Y P G G + C Y
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALC-YRPDGKGAVVGSMTGECRFY- 473
Query: 619 LKTREGNVRVSRELPGH 669
T + +++ R++ H
Sbjct: 474 -HTTDNQLQLDRDISLH 489
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +1
Query: 595 DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIXTGQQC 774
++ C++ K + E GH+G + + + +L+SS D T LW + + +C
Sbjct: 338 ESTCAVLPSKVFSISETPQHEFRGHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDEC 397
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 34.7 bits (76), Expect = 0.080
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTT------NKVHAIPLRSSWVMTC 552
L GH + Y + W S L+S SQD ++ +WD T N +H S +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 553 AYAPSGSYV-ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG 729
A+ + G D I+ L+T + +V + YLS F ++ + T+S
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQV-KVHEREINYLSFNPF-NEWVLATASS 282
Query: 730 DMTCALWDI 756
D T AL+D+
Sbjct: 283 DSTVALFDL 291
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCA 555
+T TL+GHL +A W + + +QD +WD+ + V + V +
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 369
Query: 556 YAPSGSYVACGGLDNICSIYSLKT 627
+ G YVA + IY K+
Sbjct: 370 FTSDGRYVAMAEPADFVHIYDTKS 393
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
+V DG L+ D+ + + + A+ P+G A G D C I+ +
Sbjct: 294 VVGDDPDGLLV--DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKL 351
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDDNQ 711
+V V L G+ G + RF D +
Sbjct: 352 SESVAV---LKGNLGAVRSIRFTSDGR 375
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCA 555
+T TL+GHL +A W + + +QD +WD+ + V + V +
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 363
Query: 556 YAPSGSYVACGGLDNICSIYSLKT 627
+ G YVA + IY K+
Sbjct: 364 FTSDGRYVAMAEPADFVHIYDTKS 387
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 630
+V DG L+ D+ + + + A+ P+G A G D C I+ +
Sbjct: 288 VVGDDPDGLLV--DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKL 345
Query: 631 EGNVRVSRELPGHSGYLSCCRFLDDNQ 711
+V V L G+ G + RF D +
Sbjct: 346 SESVAV---LKGNLGAVRSIRFTSDGR 369
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSHT---TNKVHAIPL 528
H + I A W S +L+SAS DGK+++WD T T H+ PL
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAVMTKHTHSFPL 402
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/76 (19%), Positives = 38/76 (50%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 579
GH + ++ W LVS +D + +WD+ + ++ ++ + V++ + +G+++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 580 ACGGLDNICSIYSLKT 627
D I +Y ++T
Sbjct: 326 LTASKDQIIKLYDIRT 341
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Frame = +1
Query: 487 WDSHTTNKVHAIPLRSSWV-------MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVR 645
W S K H + + SW + A + G Y+A GG+D ++ ++TRE +V+
Sbjct: 184 WPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTRE-HVQ 242
Query: 646 VSR------------ELPGHSGYLSCCRFLDDN-QILTSSGDMTCALWD 753
V++ GH G +S F + ++ + S D T ++W+
Sbjct: 243 VNKLKNNQVKDSVHCAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWN 291
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 579
GH + ++ + + L S S DG L +W++ + + S +++ A V
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 580 ACGGLDNICSIYS--LKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWD 753
G D +Y + E + R + CC F++ ++ L+ S + + ALW
Sbjct: 320 LSVGRDRTMQLYKVGIVVPESTRLIYRASESN---FECCCFVNSDEFLSGSDNGSIALWS 376
Query: 754 I 756
I
Sbjct: 377 I 377
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMTCA 555
+T TL GHL +A W D + +QD VWD + + V + + +
Sbjct: 310 KTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 369
Query: 556 YAPSGSYVACGGLDNICSIYSL 621
Y G Y+A + +Y +
Sbjct: 370 YTSDGKYMAMAEPADFVHVYDV 391
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 436 SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIY 615
S S +++A+ D + ++D+ ++ S V + +P G VA G C
Sbjct: 246 SGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNISTSPDGKLVAVLGDSPEC--- 301
Query: 616 SLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL-TSSGDMTCALWDI 756
L G+ +V L GH Y + + QIL T + D TC LWD+
Sbjct: 302 -LLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDV 348
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/98 (23%), Positives = 36/98 (36%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D +S S DGK+ +WD V +R C Y P G + C Y
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYH 432
Query: 619 LKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGD 732
+ E +++ +E+ H + + Q L S D
Sbjct: 433 I--FENQLQMDQEINVHGKKKVASKRISGLQYLPSDSD 468
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/98 (23%), Positives = 36/98 (36%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D +S S DGK+ +WD V +R C Y P G + C Y
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYH 432
Query: 619 LKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGD 732
+ E +++ +E+ H + + Q L S D
Sbjct: 433 I--FENQLQMDQEINVHGKKKVASKRISGLQYLPSDSD 468
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +1
Query: 247 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 426
+ELD L ++ E L + AACD + E R+ + G + ++
Sbjct: 152 SELDELDEKVEALDRHLA----AACDDGCVRIYYISESDKLTYYRSLPRVTG---RALSV 204
Query: 427 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 522
W +D++ + S S DG + WD++ ++V+ I
Sbjct: 205 TWSADAQRIFSGSSDGLIRCWDANLCHEVYRI 236
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D + +S S DGK+ +W + V R C Y P G V G L + C Y+
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVC-YQPDGQAVIIGTLTSDCRFYN 466
Query: 619 L 621
+
Sbjct: 467 V 467
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 489
++ H I AM + D R L SA +DG L VW
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D + +S S DGK+ +W + V R C Y P G V G L + C Y+
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVC-YQPDGQAVIIGTLTSDCRFYN 466
Query: 619 L 621
+
Sbjct: 467 V 467
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 489
++ H I AM + D R L SA +DG L VW
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 358 PIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 525
P G ++R ++L H AK+ + + S+S D +I+WD + + V +P
Sbjct: 3308 PRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLP 3363
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 33.5 bits (73), Expect = 0.18
Identities = 28/119 (23%), Positives = 49/119 (41%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
+ GH KI+ + + D + L + +DG + +W ++ + A LR P
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQ-------EPINQ 246
Query: 574 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALW 750
A ++ K +EL GH+G + + D N +L++S D T LW
Sbjct: 247 QAA-------LVLFPQKAFHIEETPFQELYGHTGDVLDLAWSDSNLLLSASKDKTVRLW 298
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SG 570
L GH + + W SDS L+SAS+D + +W + +H +++V + P +
Sbjct: 268 LYGHTGDVLDLAW-SDSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNK 325
Query: 571 SYVACGGLDNICSIYSL 621
+ A G +D I+ L
Sbjct: 326 NNFASGSIDGKARIWGL 342
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 582
H + A+ + + + S DG + D H+ N + + V + +P G +
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKIL- 173
Query: 583 CGGLDNICSIYSLKTRE-GNVRVSRELPGHSGYLSCCRFLDDNQILTSS--GDMTCALW 750
+ + LKT +++ ++ GH G + C F +D + + SS G+ A+W
Sbjct: 174 ------VTASTQLKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 430 WGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY---APSGSYVACGGLDN 600
W D R L ++++D T K+ A LR + Y AP+G Y+A GLD
Sbjct: 203 WSPDGRTLAVPGLRNDVVMYDRFTGEKLFA--LRGDHLEAICYLTWAPNGKYIATSGLDK 260
Query: 601 ICSIYSLKTRE 633
++ + ++
Sbjct: 261 QVLLWDVDKKQ 271
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 32.7 bits (71), Expect = 0.32
Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 5/134 (3%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSS 537
+I T + L H +++ + + + + L +AS D I+W NKV H + +
Sbjct: 211 QIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQN 270
Query: 538 WVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQIL 717
V +++P + + G + ++ + T G + SC F D +++
Sbjct: 271 PVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFT-VSSCAWFPDSTRLV 329
Query: 718 TSSGD--MTCALWD 753
S D +WD
Sbjct: 330 CGSSDPERGIVMWD 343
Score = 32.3 bits (70), Expect = 0.43
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Frame = +1
Query: 490 DSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGN-VRVSRELPG 666
D + V + + V ++ SG Y+A D C+ K + N V + L
Sbjct: 210 DQIPSETVQILVAHKNEVWFVQFSNSGKYLATASSD--CTAIIWKVLDDNKVELKHTLES 267
Query: 667 HSGYLSCCRFL-DDNQILTSSGDMTCALWDIXTG 765
H +S + DD ++LT LWD+ TG
Sbjct: 268 HQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTG 301
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 553 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL--DDNQILTSS 726
A++P+ + C D+ C I R G V++ H L C + DDN ILT S
Sbjct: 299 AFSPTSAQEFCSVGDDSCLIL-WDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGS 357
Query: 727 GDMTCALWD 753
D T L+D
Sbjct: 358 ADNTVRLFD 366
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNK 510
GH A + + W D ++ S+++DG L +WD +K
Sbjct: 384 GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSK 421
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 595 DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIXTGQQC 774
D+ C ++ K + E GH+G + + DN +L++S D T LW + +
Sbjct: 303 DSACVVFPPKVFRIMEKPLYEFRGHTGEVLDISWSKDNYLLSASMDKTVRLWKVGSNDCL 362
Query: 775 GQF 783
G F
Sbjct: 363 GVF 365
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAPSG 570
L GH I+ + W D +VS S D +W+ + V + S V C S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SD 288
Query: 571 SYVACGGLDNICSIYSL 621
S + G D C ++ +
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 541 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQIL 717
+ ++ GS + D I+ + ++E V L GHS + CC + D+ I+
Sbjct: 238 IFRIVWSLDGSKIVSVSDDRSARIWEIDSQEV---VGPVLFGHSVRVWDCC--ISDSLIV 292
Query: 718 TSSGDMTCALWDI 756
T+ D TC +W +
Sbjct: 293 TAGEDCTCRVWGV 305
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAPSG 570
L GH I+ + W D +VS S D +W+ + V + S V C S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SD 288
Query: 571 SYVACGGLDNICSIYSL 621
S + G D C ++ +
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 541 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQIL 717
+ ++ GS + D I+ + ++E V L GHS + CC + D+ I+
Sbjct: 238 IFRIVWSLDGSKIVSVSDDRSARIWEIDSQEV---VGPVLFGHSVRVWDCC--ISDSLIV 292
Query: 718 TSSGDMTCALWDI 756
T+ D TC +W +
Sbjct: 293 TAGEDCTCRVWGV 305
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D R +S S D K+ VW V L C Y P G V G C +YS
Sbjct: 565 DDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSAC-YTPDGQGVLVGSYKGSCRMYS 623
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQILTSSGDMTC 741
SGS G + C+ Y G ++++ GHS YL + +QILT S D T
Sbjct: 171 SGSVFTAAG--DSCA-YCWDVESGKIKMT--FKGHSDYLHTVVSRSSASQILTGSEDGTA 225
Query: 742 ALWDIXTGQ 768
+WD TG+
Sbjct: 226 RIWDCKTGK 234
Score = 31.5 bits (68), Expect = 0.75
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSS----WVM 546
+ + T +GH ++ + S + +++ S+DG +WD T V I + V
Sbjct: 192 KIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVS 251
Query: 547 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 726
+ A S S++ CG N+ ++++L E + +P H + D+ QILT
Sbjct: 252 SMALDGSESWLVCGQGKNL-ALWNLPASECVQTI--PIPAHVQDV----MFDEKQILTVG 304
Query: 727 GDMTCALWDI 756
+ +D+
Sbjct: 305 AEPLLRRFDL 314
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 358 PIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 525
P G ++R + L H AK+ + + S S D +I+WD + + V +P
Sbjct: 3364 PRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLP 3419
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 313 AACDTSLAQA--TSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIV 486
AACD + SNLE ++ R+L + ++ W D++ + S S DG +
Sbjct: 170 AACDDGCVRLYRISNLE-----KLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRC 224
Query: 487 WDSHTTNKVHAI 522
WD+ + ++V+ I
Sbjct: 225 WDATSCHEVYRI 236
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +1
Query: 451 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 621
LVS G + WDS + A V T A APS + V G D +Y L
Sbjct: 262 LVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKL 318
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.9 bits (69), Expect = 0.56
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 4/130 (3%)
Frame = +1
Query: 388 RTLRGHLAKI-YAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 564
RTLR H A + + D +LVS DG + WD + + +V +P
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 565 -SGSYVACGGLDNICSIYSLKTREGN--VRVSRELPGHSGYLSCCRFLDDNQILTSSGDM 735
+ S + G D+ ++ + N ++ LP + +L ++ ++G
Sbjct: 189 VNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLP-----VEDVVYLPSGGLIATAGGN 243
Query: 736 TCALWDIXTG 765
+ +WD+ G
Sbjct: 244 SVKVWDLIGG 253
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 31.9 bits (69), Expect = 0.56
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = +1
Query: 436 SDSRNLVSASQDGKLIVWDSHTTNKVHAI--PLRSSWVMTCAYAPSGSYVACGGLDNICS 609
SD VS S D + +W + + I P V +Y S +A G D
Sbjct: 819 SDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPANVCCVQFSSY--SNHLLAFGSADYKVY 876
Query: 610 IYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCALWDIXTGQQCG 777
Y L+ + L GH +S +F+D I+++S D + LW++ G
Sbjct: 877 CYDLRYVKTPWCT---LAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSG 929
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 528
+L GH ++ + S L S S DG L VWD ++ VH+I L
Sbjct: 126 SLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL 171
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 31.5 bits (68), Expect = 0.75
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNK-VHAIP 525
RI+ T GH ++ + W + L S D + +WD S+ T + +H
Sbjct: 205 RIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFE 264
Query: 526 LRSSWVMTCAYAP-SGSYVACGG 591
++ V A+ P S +A GG
Sbjct: 265 EHTAAVRALAWCPFQASLLATGG 287
Score = 28.7 bits (61), Expect = 5.3
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRNLVSASQ---DGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
H A + A+ W +L++ DGK+ W++HT ++++ S V + ++ S
Sbjct: 266 HTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVE-TGSQVCSLLWSKSER 324
Query: 574 YV--ACGGLDNICSIYSLKTREGNVRVSRELPGH-SGYLSCCRFLDDNQILTSSGDMTCA 744
+ + G N +++ + V+++ EL GH S L + D + +++GD T
Sbjct: 325 ELLSSHGFTQNQLTLWKYPSM---VKMA-ELNGHTSRVLFMAQSPDGCTVASAAGDETLR 380
Query: 745 LWDI 756
LW++
Sbjct: 381 LWNV 384
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 439 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 618
D +S S D K+ +W+ V L+ C Y P G G ++ C +YS
Sbjct: 571 DEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVC-YTPDGQAAFVGSINGHCRLYS 629
>At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 310
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 217 ELCVTRVL-IMNELDSLRQEAETLKNAIRDARK-AACDTSLAQATSNLEPIGRIQMR 381
ELC+ R+ +M ELDSLR E ++L+ D K TS + + S PI Q R
Sbjct: 97 ELCLNRLQSLMTELDSLRHENDSLRFENSDLLKLIRISTSSSSSVSPPAPIHNRQFR 153
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.1 bits (67), Expect = 0.99
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNK-VHAIPL 528
RI+ T GH ++ + W + L S D + +WD S+ T + +H
Sbjct: 223 RIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEE 282
Query: 529 RSSWVMTCAYAP-SGSYVACGG 591
++ V A+ P S +A GG
Sbjct: 283 HTAAVRALAWCPFQASLLATGG 304
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRNLVSASQ---DGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 573
H A + A+ W +L++ DGK+ W++HT ++++ S V + ++ S
Sbjct: 283 HTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVE-TGSQVCSLLWSKSER 341
Query: 574 YV--ACGGLDNICSIYSLKTREGNVRVSRELPGH-SGYLSCCRFLDDNQILTSSGDMTCA 744
+ A G N +++ + V+++ EL GH S L + D + +++GD T
Sbjct: 342 ELLSAHGFTQNQLTLWKYPSM---VKMA-ELNGHTSRVLFMAQSPDGCTVASAAGDETLR 397
Query: 745 LWDI 756
LW++
Sbjct: 398 LWNV 401
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRS 534
L GH I + S L S S DG L++WD ++ V +I L++
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQA 229
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW-----DSHTTNKVHAIPLRSSWVMTCAY 558
LRGH +++ ++ W + L + +D + +W + + + + S V +
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 559 APSGSYVACGGLDNICSIYSLKTREGN---VRVSREL-PGHSGYLSCCRF-LDDNQILTS 723
P+ + DN I+ + +G+ V+ EL GHS + F ++++T
Sbjct: 148 HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTC 207
Query: 724 SGDMTCALW 750
S D+ +W
Sbjct: 208 SDDLAVKIW 216
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 484 VWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTRE 633
V+D T K+ L T A + G Y+A GG D S+ +KT E
Sbjct: 238 VYDISTWKKLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTME 287
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCA-YAPS 567
L+ H + + W S S +V+ S D VW V + LR + C ++P
Sbjct: 51 LQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
Query: 568 GSYVACG-GLDNICSIYSLKTREGNVRVSREL-PGHSGYLSCCRFLDDNQIL-TSSGDMT 738
+ A G G +C Y +E N VS+ + H ++ + +N +L T+S D
Sbjct: 111 ENKFAVGSGAKTVCICY--YEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGK 168
Query: 739 CALW 750
C ++
Sbjct: 169 CRVF 172
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCA-YAPS 567
L+ H + + W S S +V+ S D VW V + LR + C ++P
Sbjct: 51 LQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
Query: 568 GSYVACG-GLDNICSIYSLKTREGNVRVSREL-PGHSGYLSCCRFLDDNQIL-TSSGDMT 738
+ A G G +C Y +E N VS+ + H ++ + +N +L T+S D
Sbjct: 111 ENKFAVGSGAKTVCICY--YEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGK 168
Query: 739 CALW 750
C ++
Sbjct: 169 CRVF 172
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCA-YAPS 567
L+ H + + W S S +V+ S D VW V + LR + C ++P
Sbjct: 51 LQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
Query: 568 GSYVACG-GLDNICSIYSLKTREGNVRVSREL-PGHSGYLSCCRFLDDNQIL-TSSGDMT 738
+ A G G +C Y +E N VS+ + H ++ + +N +L T+S D
Sbjct: 111 ENKFAVGSGAKTVCICY--YEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGK 168
Query: 739 CALW 750
C ++
Sbjct: 169 CRVF 172
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNK 510
GH A + + W D ++ S+++DG L +WD K
Sbjct: 373 GHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGK 410
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +1
Query: 460 ASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGN 639
++ GK+ V+D KV + + + P G +A G D I+ L +R
Sbjct: 446 STSGGKIAVFDLKNFEKVASFGSPTPMATYFIFIP-GDLLAVGLDDGSIFIHCLSSR--- 501
Query: 640 VRVSRELPGHSGYLSCCRFLD-DNQILTSSGDMTCALW 750
+V +L GH ++C F N +++S D LW
Sbjct: 502 -KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLW 538
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 513
+ + L GH KI + + LVS+ DGKL +W + + K+
Sbjct: 502 KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKL 546
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 667 HSGYLSCCRF--LDDNQILTSSGDMTCALWDIXTGQ 768
HS Y++C +F +DDN ++ S D +W I Q
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQ 542
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +1
Query: 415 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH-AIPLRSSWVMTCAYAPSGSYVACGG 591
+ ++ + D ++L+S+ DG++ VWD T ++ + S+ + + +G+ A G
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGT 436
Query: 592 LDNICSIYSLKTREGNVRVS-RELPGHSGYLSCCRFLDDNQIL 717
I +IY G R + + + + +F D QIL
Sbjct: 437 DRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQIL 479
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHT 501
H + + W + RN L SAS D K+ VWD T
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVAT 297
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHT 501
H + + W + RN L SAS D K+ VWD T
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVAT 265
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 582
H I M + SDS LV S DG L V + T+ +++ +G V
Sbjct: 77 HEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVI 136
Query: 583 CGGLDNICSIYS 618
CG + +YS
Sbjct: 137 CGTQNGTLLLYS 148
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +1
Query: 403 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 582
H I M + SDS LV S DG L V + T+ +++ +G V
Sbjct: 134 HEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVI 193
Query: 583 CGGLDNICSIYS 618
CG + +YS
Sbjct: 194 CGTQNGTLLLYS 205
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSG-DMTC 741
S +A G D ++ SL V ++L GHS ++ F +NQ + SS D T
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPS---VLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTI 240
Query: 742 ALWDIXTG 765
+W++ G
Sbjct: 241 RVWELSRG 248
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Frame = +1
Query: 367 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 528
RI+ T GH ++ + W S D + +WD T +H
Sbjct: 239 RIRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEE 298
Query: 529 RSSWVMTCAYAP-SGSYVACGG 591
++ V A+ P S +A GG
Sbjct: 299 HTAAVRALAWCPFQASLLATGG 320
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 394 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 492
L+GH + + + + +S +++AS+DG + VW+
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 400 GHLAKIYAMHWGSDSRNLVSASQDGKLIVW 489
GH + + + D LVS SQDG + VW
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Frame = +1
Query: 457 SASQDGKLIVWD----SHTTNKVHAIPLRSSWVMTCAYA----------PSGSYVACGGL 594
SAS DG + VWD S + + + L S V T A P +A GGL
Sbjct: 139 SASSDGVVNVWDVSFPSQPSEECKVVCLDSICVDTKAIVTLSLAELPQNPGRFALALGGL 198
Query: 595 DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 696
DN +YS R G EL GH+ ++ F
Sbjct: 199 DNKIKLYS-GERTGKFTSVCELKGHTDWIRSLDF 231
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 489
RT LRGH + + S+ + L ++ D ++IVW
Sbjct: 390 RTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 28.3 bits (60), Expect = 7.0
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNKVHAIPLRSSWVMTCA 555
TL GH + + + ++ + ++ D + +WD S +K +R+ T
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKL 216
Query: 556 YAPSGS--YVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSS 726
G+ ++ C LD + +++ L T + L GH G ++ LD I + S
Sbjct: 217 LVAGGTDGFIHCWKSLDGLRNLFDL-TGFQKEKTEFRLWGHEGPITSLA-LDMTSIFSGS 274
Query: 727 GDMTCALWD 753
DM+ +WD
Sbjct: 275 WDMSVRIWD 283
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 565 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQILTSSGDMTCA 744
S S++A G C ++ L+ G + R H GY++ + + +++SS D T
Sbjct: 423 SPSWIAAGFSSGQCRLFDLR-ENGFISSWR---AHDGYVTKLVAPESHLLVSSSLDKTLR 478
Query: 745 LWDI 756
+WD+
Sbjct: 479 IWDL 482
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 379 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 489
RT LRGH + + S+ + L ++ D +++VW
Sbjct: 390 RTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 370 IQMRTRRTLRGHLAKIYAM-HWGSDSRNLVSASQDGKLIVW 489
I R RGH ++ M + D L S S DGK+ VW
Sbjct: 209 INTALRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVW 249
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 391 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 516
T+ H I AM W L + S D L WD+ N VH
Sbjct: 109 TVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVH 150
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,249,756
Number of Sequences: 28952
Number of extensions: 317097
Number of successful extensions: 1478
Number of sequences better than 10.0: 164
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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