Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E15
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    27   0.35 
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    25   1.8  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            25   1.8  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   5.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   7.4  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   7.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   9.8  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 579 SRHSAAATAASMERPPAFSVSVPAPEHDFAXEDTLAVRDHL 457
           S  +AAA  AS   PP    + P+P        T A+ D L
Sbjct: 154 SNVAAAAAGASASTPPTIPSASPSPTRSTDLSQTYAIDDEL 194


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 582 WSRHSAAATAASMERPPAFSVSVPAPEHDFAXEDTLAVRDHLIIS 448
           W + S  +T  S +   +  + VP P + F  +D   +   L IS
Sbjct: 10  WQQRSFPSTGTSSQSVVSIVLRVPFPANRFQPDDIFTMEQFLKIS 54


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 582 WSRHSAAATAASMERPPAFSVSVPAPEHDFAXEDTLAVRDHLIIS 448
           W + S  +T  S +   +  + VP P + F  +D   +   L IS
Sbjct: 10  WQQRSFPSTGTSSQSVVSIVLRVPFPANRFQPDDIFTMEQFLKIS 54


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -3

Query: 582 WSRHSAAATAASMERPPAFSVSVPAPEHDFAXEDTLAVRD 463
           W R         +  P    ++VPA E+    E+T+ VRD
Sbjct: 432 WLREHKHLFQGKIYEPMILELNVPALENVQFLENTIGVRD 471


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 206 RNGHVHEITGYCTVQCTYCNYKHTQL 129
           R     + TG  T  C YCNY   +L
Sbjct: 115 RGKRTQQSTG-STYMCNYCNYTSNKL 139


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -2

Query: 574 AQRGGDGGVHGAPARVQRLRARTGTRLR 491
           A  GG G V G   R  R +A TGT  R
Sbjct: 291 ALAGGSGTVGGRSKRSVRRKAGTGTGKR 318


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 565 GGDGGVHGAPARVQRLRARTGTRLRV 488
           GGD    G+  RV R RAR+ +  RV
Sbjct: 23  GGDAHPQGSSGRVLRPRARSVSLNRV 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,902
Number of Sequences: 2352
Number of extensions: 7478
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)