Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E15
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058701-1|AAL13930.1|  579|Drosophila melanogaster LD42301p pro...    33   0.29 
AE014298-2733|AAF48854.2|  579|Drosophila melanogaster CG6461-PA...    33   0.29 
AE014298-2490|AAN09427.1|  777|Drosophila melanogaster CG4829-PC...    32   0.67 
AE014298-2489|AAF48672.1|  777|Drosophila melanogaster CG4829-PA...    32   0.67 
AE014298-2488|AAN09426.2|  822|Drosophila melanogaster CG4829-PB...    32   0.67 
AL031884-1|CAA21412.2|  571|Drosophila melanogaster EG:23E12.1 p...    31   1.6  
AY075582-1|AAL68387.1|  841|Drosophila melanogaster SD08161p pro...    30   2.7  
AJ312282-1|CAC41644.1|  841|Drosophila melanogaster nuclear RNA ...    30   2.7  
AE014296-2758|AAF49447.3|  841|Drosophila melanogaster CG4118-PB...    30   2.7  
AE014296-2757|AAF49448.3|  841|Drosophila melanogaster CG4118-PA...    30   2.7  

>AY058701-1|AAL13930.1|  579|Drosophila melanogaster LD42301p
           protein.
          Length = 579

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 467 LTASVSSXAKSCSGAGTETLNAGGRSMDAAVAAALC 574
           ++ +V S    C+  G E L  GG ++DAA+A  LC
Sbjct: 39  ISGAVVSNGIGCAAVGGEMLTDGGSAVDAAIATLLC 74


>AE014298-2733|AAF48854.2|  579|Drosophila melanogaster CG6461-PA
           protein.
          Length = 579

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 467 LTASVSSXAKSCSGAGTETLNAGGRSMDAAVAAALC 574
           ++ +V S    C+  G E L  GG ++DAA+A  LC
Sbjct: 39  ISGAVVSNGIGCAAVGGEMLTDGGSAVDAAIATLLC 74


>AE014298-2490|AAN09427.1|  777|Drosophila melanogaster CG4829-PC,
           isoform C protein.
          Length = 777

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 476 SVSSXAKSCSGAGTETLNAGGRSMDAAVAAALC 574
           +VSS    CS  G+  L   G ++DAA+AA LC
Sbjct: 246 AVSSDNLECSKIGSGILQKNGSAVDAAIAALLC 278


>AE014298-2489|AAF48672.1|  777|Drosophila melanogaster CG4829-PA,
           isoform A protein.
          Length = 777

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 476 SVSSXAKSCSGAGTETLNAGGRSMDAAVAAALC 574
           +VSS    CS  G+  L   G ++DAA+AA LC
Sbjct: 246 AVSSDNLECSKIGSGILQKNGSAVDAAIAALLC 278


>AE014298-2488|AAN09426.2|  822|Drosophila melanogaster CG4829-PB,
           isoform B protein.
          Length = 822

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 476 SVSSXAKSCSGAGTETLNAGGRSMDAAVAAALC 574
           +VSS    CS  G+  L   G ++DAA+AA LC
Sbjct: 291 AVSSDNLECSKIGSGILQKNGSAVDAAIAALLC 323


>AL031884-1|CAA21412.2|  571|Drosophila melanogaster EG:23E12.1
           protein.
          Length = 571

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 476 SVSSXAKSCSGAGTETLNAGGRSMDAAVAAALC 574
           +V+S    C+  G   L+ GG + DAA+A  LC
Sbjct: 41  AVASNGVGCAEVGGSILDIGGSAADAAIATMLC 73


>AY075582-1|AAL68387.1|  841|Drosophila melanogaster SD08161p
           protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 531 AFSVSVPAPEHDFAXEDTLAVRDHLII 451
           AFSV+ P P    A ED+L V+DH ++
Sbjct: 769 AFSVNFPDPSERQAEEDSLDVKDHKLL 795


>AJ312282-1|CAC41644.1|  841|Drosophila melanogaster nuclear RNA
           export factor 2 (NXF2) protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 531 AFSVSVPAPEHDFAXEDTLAVRDHLII 451
           AFSV+ P P    A ED+L V+DH ++
Sbjct: 769 AFSVNFPDPSERQAEEDSLDVKDHKLL 795


>AE014296-2758|AAF49447.3|  841|Drosophila melanogaster CG4118-PB,
           isoform B protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 531 AFSVSVPAPEHDFAXEDTLAVRDHLII 451
           AFSV+ P P    A ED+L V+DH ++
Sbjct: 769 AFSVNFPDPSERQAEEDSLDVKDHKLL 795


>AE014296-2757|AAF49448.3|  841|Drosophila melanogaster CG4118-PA,
           isoform A protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 531 AFSVSVPAPEHDFAXEDTLAVRDHLII 451
           AFSV+ P P    A ED+L V+DH ++
Sbjct: 769 AFSVNFPDPSERQAEEDSLDVKDHKLL 795


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,575,161
Number of Sequences: 53049
Number of extensions: 332687
Number of successful extensions: 1492
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)