Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E15
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92838-5|CAB07404.2|  578|Caenorhabditis elegans Hypothetical pr...    35   0.038
U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical pr...    35   0.050
AF068719-3|AAM45352.1|  603|Caenorhabditis elegans Hypothetical ...    32   0.35 
AF068719-2|AAC17783.1|  633|Caenorhabditis elegans Hypothetical ...    32   0.35 
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z92838-5|CAB07404.2|  578|Caenorhabditis elegans Hypothetical
           protein T03D8.6 protein.
          Length = 578

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +2

Query: 473 ASVSSXAKSCSGAGTETLNAGGRSMDAAVAAALCL 577
           A+++S   +CS  G E L  GG S+DA++A+  CL
Sbjct: 38  AALTSDNAACSKIGGEILRKGGNSIDASIASMFCL 72


>U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical
           protein T19H12.6 protein.
          Length = 619

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 464 SLTASVSSXAKSCSGAGTETLNAGGRSMDAAVAAALCL 577
           +L A+V + +  CS  G   L  GG +++AA+AA+ CL
Sbjct: 219 NLRAAVFTSSAECSAIGKSILVRGGNAVEAAIAASFCL 256


>AF068719-3|AAM45352.1|  603|Caenorhabditis elegans Hypothetical
           protein H14N18.4b protein.
          Length = 603

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 473 ASVSSXAKSCSGAGTETLNAGGRSMDAAVAAALCL 577
           A+V+S    CS  G + L  GG ++DA +A+ LC+
Sbjct: 75  AAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCI 109


>AF068719-2|AAC17783.1|  633|Caenorhabditis elegans Hypothetical
           protein H14N18.4a protein.
          Length = 633

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 473 ASVSSXAKSCSGAGTETLNAGGRSMDAAVAAALCL 577
           A+V+S    CS  G + L  GG ++DA +A+ LC+
Sbjct: 105 AAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCI 139


>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 579 SRHSAAATAASMERPPAFSVSVPAPEHDFAXEDTLAV 469
           SR   +  AASM+ P  F+       HD   +DT+AV
Sbjct: 849 SRMRISPVAASMDEPMRFATIREITPHDAFVDDTIAV 885


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 579 SRHSAAATAASMERPPAFSVSVPAPEHDFAXEDTLAV 469
           SR   +  AASM+ P  F+       HD   +DT+AV
Sbjct: 640 SRMRISPVAASMDEPMRFATIREITPHDAFVDDTIAV 676


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,003,832
Number of Sequences: 27780
Number of extensions: 161952
Number of successful extensions: 522
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)