Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E12
         (809 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical ...    29   3.0  
AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl...    29   3.0  
U41547-4|AAA83194.3|  376|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    29   5.2  
U80441-1|AAB37651.1|  647|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8b protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 34  HNLNYLNRFAXTYPIVIFFN*TKHFYFDYVF*SV*K-LYVEFYSNKLISIYCQYSNTRFH 210
           H +N LN F  T  +   F   K     Y+   V + LYV   ++ L   YC Y+ + FH
Sbjct: 289 HTINMLNNFGATLVLKNRFELAKK----YLAIGVDRILYVNECAHMLPGYYCNYAESLFH 344

Query: 211 TYNVSEK*KLSICRKS 258
           T   +E   L   RK+
Sbjct: 345 TGQKNE--ALEFARKA 358


>AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8a protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 34  HNLNYLNRFAXTYPIVIFFN*TKHFYFDYVF*SV*K-LYVEFYSNKLISIYCQYSNTRFH 210
           H +N LN F  T  +   F   K     Y+   V + LYV   ++ L   YC Y+ + FH
Sbjct: 290 HTINMLNNFGATLVLKNRFELAKK----YLAIGVDRILYVNECAHMLPGYYCNYAESLFH 345

Query: 211 TYNVSEK*KLSICRKS 258
           T   +E   L   RK+
Sbjct: 346 TGQKNE--ALEFARKA 359


>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
           protein 17 protein.
          Length = 1146

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 456 NICCLLKDETIYCELVQWSEDCVSNECTILAQYLGALNDVLF 581
           N+  ++KDE   C      EDCV  E + +A+Y G L D  +
Sbjct: 282 NVIEMMKDEPFNCV-----EDCVGEEYSSVAKYAGQLADAFY 318


>U41547-4|AAA83194.3|  376|Caenorhabditis elegans Hypothetical
           protein F22A3.1 protein.
          Length = 376

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 576 LFPPNMCSNDGVDLLMRRSKDFPGIL 653
           L PP  CS  G+DLL    KDF  IL
Sbjct: 105 LQPPRNCSITGIDLLGMSQKDFEMIL 130


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 492 CELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSN 602
           CE+V  S+  +   CT L  +   ++  L  PN+C N
Sbjct: 645 CEIVSESDGILEARCTHLTDFAIIVDAALNDPNVCDN 681


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 492 CELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSN 602
           CE+V  S+  +   CT L  +   ++  L  PN+C N
Sbjct: 627 CEIVSESDGILEARCTHLTDFAIIVDAALNDPNVCDN 663


>U80441-1|AAB37651.1|  647|Caenorhabditis elegans Hypothetical
           protein F27C1.6 protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +3

Query: 558 GALNDVLFPPNMCSNDGVDLLMRRSKDFPGILSPKIEIATKVRIDEVWN 704
           G  N V+   NM + DG+  +  RS  FP       E   K  +   WN
Sbjct: 567 GERNGVIIAENMTAKDGIGKIQPRSLPFPYSRVEDYEAVLKQPLGLEWN 615


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,891,742
Number of Sequences: 27780
Number of extensions: 427080
Number of successful extensions: 1151
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)