Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E12
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.8  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 622 ISRSTPSLEHMFGGKST 572
           I+ STP L+ ++GG ST
Sbjct: 117 ITNSTPLLKKLYGGNST 133


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 283  YRGSHVLVCGYVKMVEFHYQ 342
            Y G H  VCG   M E  YQ
Sbjct: 1064 YEGGHFYVCGDCTMAEDVYQ 1083


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 411 VFYFRKRFQETCALNNICCLLKDETI 488
           +FYFRK    + A   +C +  DE +
Sbjct: 13  LFYFRKGKNASQAHKKLCAVYGDEAL 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,957
Number of Sequences: 438
Number of extensions: 5767
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)