Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_E08
(500 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 31 0.13
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.17
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 0.30
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.39
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 27 1.2
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 2.1
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 3.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 6.4
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 8.4
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 30.7 bits (66), Expect = 0.13
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +3
Query: 108 TLKFSSR-TETATNLLTTAR-TSLILPKTTTLMETATNL--STTVHITWTVP 251
T FSS TET+T+ +T+ TS++ P +T+ T T + +T+++ T TVP
Sbjct: 46 TTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVP 97
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.17
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 325 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 209
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 29.5 bits (63), Expect = 0.30
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 125 SNRNGYEPIDNRPYIVNPPKD-YNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 289
+NR Y+ +++ Y P +D YN N N Y PI N Y+++ G PYF PG
Sbjct: 100 NNRTYYK--NSQGYRRKPKRDDYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.39
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 138 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 287
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.5 bits (58), Expect = 1.2
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 132 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 284
ET T + T + +TTT+ + T + T T P + T+ LP++
Sbjct: 105 ETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 211 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 318
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 3.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 182 KDYNPNGNGYEPIDNGAYYVDRPQGRP 262
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 6.4
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 105 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 284
PT SS ++ N TTA ++ P ++ TAT+ S+T + A SS PL+
Sbjct: 416 PTSSVSSTPLSSANS-TTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLT 474
Query: 285 LV 290
V
Sbjct: 475 SV 476
Score = 24.6 bits (51), Expect = 8.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 108 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 284
T +S T ++ TTA ++ P T+ TAT+ S+T + A SS PL+
Sbjct: 334 TATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLT 392
Score = 24.6 bits (51), Expect = 8.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 108 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 284
T +S T ++ TTA ++ P T+ TAT+ S+T + A SS PL+
Sbjct: 448 TATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLT 506
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 193 VVVFGRINDVRAVVNRFVAVSVRDENL 113
V++ R+ +R +VNR V +DE L
Sbjct: 1315 VIIRNRLTSIRFIVNRKFFVCFKDETL 1341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,737,550
Number of Sequences: 5004
Number of extensions: 37387
Number of successful extensions: 120
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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