Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E05
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical ...    31   0.73 
Z81531-8|CAB04322.2|  344|Caenorhabditis elegans Hypothetical pr...    27   3.6  
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   6.8  
Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical pr...    28   9.0  
U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.9 protein.
          Length = 263

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -1

Query: 413 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPP 255
           A+PS P  I     +T+KP  S P +I   S +  +  +  F  TL + P  P
Sbjct: 186 ANPSLPVHIQTFRVKTRKPVLSRPTKIRFSSEADRNSFIFSFSKTLRSLPDRP 238


>Z81531-8|CAB04322.2|  344|Caenorhabditis elegans Hypothetical
           protein F36D3.9 protein.
          Length = 344

 Score = 26.6 bits (56), Expect(2) = 3.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 642 TSWRRCGRTGLLRRASVCGSC 704
           T W +C    L+R  S CGSC
Sbjct: 109 TRWPQCKSMKLIREQSNCGSC 129



 Score = 21.0 bits (42), Expect(2) = 3.6
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = +3

Query: 693 CGSCCSRRCHDPX*TRSFSWLRLRSM 770
           CG  C   C      R+F W   R +
Sbjct: 163 CGMSCGEGCDGGFPYRAFQWWARRGV 188


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -3

Query: 417 NSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDALSVSPASNHHLIH 238
           +S  L+S   N +  + P+T+    +  S +F+F+L       P  +L +SP  ++H+IH
Sbjct: 261 SSLLLSSINSNLSHNSIPQTSP-KRISQSSSFSFSL-------PPSSLPLSPKIDNHVIH 312

Query: 237 RIR 229
           +I+
Sbjct: 313 KIK 315


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 452 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 345
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical
           protein F33H1.3 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 778 YHPMERKRSHEKERVXQGSWHLREQHEPHTEALLS-SPVLPQRRQEVLDLLKHQPIYR 608
           Y+PM  +  HE E V   +  +   +EP   A LS +P L   R+E + L+  Q + R
Sbjct: 260 YNPMGFQNHHE-EAVISSAPQINRSNEPAAPATLSAAPELRNLRRETVKLVPAQLLRR 316


>U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical
           protein W03B1.6 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 155 ETGKNWY*RLSSVATSMTLAMIVV 84
           ET + WY +LSS +T+M +A++ V
Sbjct: 15  ETFEKWYLKLSSTSTAMLIAILFV 38


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,877,513
Number of Sequences: 27780
Number of extensions: 388612
Number of successful extensions: 1128
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)