Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E04
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.5  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   4.6  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   6.1  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 665  VEEHTLQSETVTKFLMFMDPENDKHVDHVFNSFKN 769
            V+E T  S+ +++ L F   +  KH  HV   +K+
Sbjct: 2048 VQEDTQFSQLLSESLDFFGIDEKKHAQHVLVDYKS 2082


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 373 DNL*VEYIIFRSKHYITLENRIFTIVSFWV 284
           DNL + +  F ++HY++  NRI   +  W+
Sbjct: 226 DNLSL-FASFVTQHYVSRRNRIIPSLEHWI 254


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = -2

Query: 454 IFSDELDSVFNGL*IWSDVFKVVGFWQDNL*VEYIIFRSKHYITLENRIFT 302
           IFS++L  +   + ++S +F V+G +  N+ V Y++FR+K   T+ N   T
Sbjct: 88  IFSNKLVQIVFCV-LYSSIF-VLGVF-GNVLVCYVVFRNKAMQTVTNLFIT 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,371
Number of Sequences: 2352
Number of extensions: 17830
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)