Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_E03
(783 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 47 2e-05
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 44 9e-05
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 44 2e-04
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 40 0.002
At1g67230.1 68414.m07652 expressed protein 31 1.1
At5g17220.1 68418.m02018 glutathione S-transferase, putative 30 1.5
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr... 29 2.6
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 28 6.1
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 28 6.1
At2g06200.1 68415.m00682 expressed protein 28 6.1
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/122 (26%), Positives = 59/122 (48%)
Frame = +1
Query: 418 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 597
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ S +
Sbjct: 112 SYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS---IVM 168
Query: 598 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 777
V+ G + + AL +K + E++ +H +KN+D+ + +IE EF++
Sbjct: 169 PLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDV----HLADFIESEFLT 224
Query: 778 XQ 783
Q
Sbjct: 225 EQ 226
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 44.4 bits (100), Expect = 9e-05
Identities = 31/122 (25%), Positives = 58/122 (47%)
Frame = +1
Query: 418 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 597
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ +
Sbjct: 110 SYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQS 169
Query: 598 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 777
+ E G + A+ AL +K + E++ +H +KN D+ ++ +IE F++
Sbjct: 170 EFDH---PEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDV----QLADFIESVFLN 222
Query: 778 XQ 783
Q
Sbjct: 223 EQ 224
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 43.6 bits (98), Expect = 2e-04
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Frame = +1
Query: 286 YQNVDQGCRRTLSLP---HCSAYYGQFKD-NHVVANELKALASLYLKRSYHYLLSASYFN 453
+Q ++ + L++P H S +F D + V NE ++ SY Y +YF+
Sbjct: 64 FQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQ---INVEYNVSYVYHSMYAYFD 120
Query: 454 NYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGH 633
+G AK F++ S++ +++ +RGG++ H + + E G
Sbjct: 121 RDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKL--HPIVSPISEFEH-AEKGD 177
Query: 634 EIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSXQ 783
+ A+ AL +K E++ +H+ ++N +D ++ ++E EF+ Q
Sbjct: 178 ALYAMELALSLEKLTNEKLLNVHKVASEN----NDPQLADFVESEFLGEQ 223
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/122 (24%), Positives = 53/122 (43%)
Frame = +1
Query: 418 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 597
SY Y +YF+ +GFAK F S + +++ KRGG++ S
Sbjct: 104 SYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVS 163
Query: 598 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 777
+ E G + A+ AL +K E++ + KN+D+ ++ ++E EF+
Sbjct: 164 EFDHE---EKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDV----QLVDFVESEFLG 216
Query: 778 XQ 783
Q
Sbjct: 217 EQ 218
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +1
Query: 460 QTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTT---LKGDK-GSNYTVEV 627
+ RE F K + +L D+ K +K++T + K++ H LK +K +N +E
Sbjct: 515 KAQRESFEKEWEEL-DERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMER 573
Query: 628 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEI 747
E +AKA + ER + ++ S LLHD E+
Sbjct: 574 ELETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEM 613
>At5g17220.1 68418.m02018 glutathione S-transferase, putative
Length = 214
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 343 YYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSD-DSWE 519
Y + N +A E +A L + YL+S + N R F + + ++SD SW+
Sbjct: 147 YNNRLSSNRFLAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWK 206
Query: 520 KTIGLIKH 543
K + L H
Sbjct: 207 KLMVLAGH 214
>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF00646: F-box domain, PF01344: Kelch motif
Length = 372
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 379 NELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKT 525
NE AS+ L R + L S Y N+Y T R+G + + + +D+W KT
Sbjct: 218 NEWFTHASVSLDRKVYALNSREYMNSYDT-RDGSYQRY-TIPEDNWWKT 264
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 508 DSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTQKQ 675
+ WEK L + K +++ T + G +TV+ GH AL+KA+ T K+
Sbjct: 173 EKWEKPKDLDEVYVKYEARLE--DGTIVGKSDGVEFTVKEGHFCPALSKAVKTMKR 226
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 448 FNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRG 558
+N + NR G K + WEK IG ++H KRG
Sbjct: 1729 WNKWIYNRGGIGVPPEKSWESWWEKEIGHLRHSGKRG 1765
>At2g06200.1 68415.m00682 expressed protein
Length = 244
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 560 PPLLVTCFMRPMVFSHESSDNFLKSFANPSL 468
PP L+ RP +FS SS + SF +P+L
Sbjct: 32 PPHLLFLIKRPFLFSSSSSSSSSSSFFSPTL 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,388
Number of Sequences: 28952
Number of extensions: 325813
Number of successful extensions: 924
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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