Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_E02
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051641-1|AAK93065.1|  585|Drosophila melanogaster GM14014p pro...    33   0.35 
AE014298-739|AAN09138.1|  585|Drosophila melanogaster CG3249-PB,...    33   0.35 
AE014298-738|AAF46032.2|  585|Drosophila melanogaster CG3249-PA,...    33   0.35 
AE014298-737|AAN09139.2|  607|Drosophila melanogaster CG3249-PC,...    33   0.35 

>AY051641-1|AAK93065.1|  585|Drosophila melanogaster GM14014p
           protein.
          Length = 585

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 189 MAPCRQLLMWSVPSIAVLLGIFWFKKKREYAKSDP 293
           M   R LL  S+P +A +LG+FWF+++ +     P
Sbjct: 1   MVSGRPLLYLSLPGVAFILGVFWFRRRYKNCLDKP 35


>AE014298-739|AAN09138.1|  585|Drosophila melanogaster CG3249-PB,
           isoform B protein.
          Length = 585

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 189 MAPCRQLLMWSVPSIAVLLGIFWFKKKREYAKSDP 293
           M   R LL  S+P +A +LG+FWF+++ +     P
Sbjct: 1   MVSGRPLLYLSLPGVAFILGVFWFRRRYKNCLDKP 35


>AE014298-738|AAF46032.2|  585|Drosophila melanogaster CG3249-PA,
           isoform A protein.
          Length = 585

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 189 MAPCRQLLMWSVPSIAVLLGIFWFKKKREYAKSDP 293
           M   R LL  S+P +A +LG+FWF+++ +     P
Sbjct: 1   MVSGRPLLYLSLPGVAFILGVFWFRRRYKNCLDKP 35


>AE014298-737|AAN09139.2|  607|Drosophila melanogaster CG3249-PC,
           isoform C protein.
          Length = 607

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 189 MAPCRQLLMWSVPSIAVLLGIFWFKKKREYAKSDP 293
           M   R LL  S+P +A +LG+FWF+++ +     P
Sbjct: 23  MVSGRPLLYLSLPGVAFILGVFWFRRRYKNCLDKP 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,185,474
Number of Sequences: 53049
Number of extensions: 565415
Number of successful extensions: 1075
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)