Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D24
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 208 3e-54
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 208 4e-54
05_01_0043 - 295041-295173,296252-296537,296616-296697 208 6e-54
01_07_0267 + 42410174-42410252,42410679-42411097 198 3e-51
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 157 1e-38
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 94 1e-19
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 38 0.013
04_01_0244 - 3194141-3195091,3195301-3195312 33 0.29
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382... 32 0.67
06_03_0363 + 19904002-19905792 32 0.67
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 31 0.89
07_01_0469 - 3552409-3553368 31 1.5
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 30 2.0
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 30 2.0
09_01_0019 + 403078-404211 30 2.7
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 30 2.7
09_06_0081 + 20745627-20748144,20748211-20748308 29 3.6
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 3.6
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 29 3.6
10_08_0401 + 17629912-17630376 29 4.7
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 4.7
08_02_0341 + 15994817-15994852,15995371-15995439,15995667-159959... 29 4.7
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 29 4.7
10_07_0029 + 12031711-12032464,12044289-12044386 29 6.2
04_04_1125 + 31085106-31085714 29 6.2
09_06_0223 + 21659549-21659729,21659888-21659979 28 8.3
05_03_0591 + 15892772-15893412,15893478-15893910 28 8.3
03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826 28 8.3
03_01_0570 - 4205739-4205776,4205846-4205897,4205939-4206067,420... 28 8.3
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 208 bits (509), Expect = 3e-54
Identities = 100/144 (69%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
Frame = +1
Query: 223 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 402
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 403 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 579
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+LF
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131
Query: 580 VGMILILIFAEVLGLYGLIVAIYL 651
VGMILILIFAE L LYGLIV I L
Sbjct: 132 VGMILILIFAEALALYGLIVGIIL 155
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 217 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 390
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 391 YGLVVAVLIA 420
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 208 bits (508), Expect = 4e-54
Identities = 99/144 (68%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
Frame = +1
Query: 223 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 402
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 403 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 579
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+LF
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131
Query: 580 VGMILILIFAEVLGLYGLIVAIYL 651
VGMILILIFAE L LYGLIV I L
Sbjct: 132 VGMILILIFAEALALYGLIVGIIL 155
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 217 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 390
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 391 YGLVVAVLIA 420
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 208 bits (507), Expect = 6e-54
Identities = 99/144 (68%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
Frame = +1
Query: 223 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 402
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 403 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 579
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+LF
Sbjct: 73 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 132
Query: 580 VGMILILIFAEVLGLYGLIVAIYL 651
VGMILILIFAE L LYGLIV I L
Sbjct: 133 VGMILILIFAEALALYGLIVGIIL 156
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +1
Query: 208 NPIYGPFF---GVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVM 372
NP P+F G +S + G A G A G A + + +P+L + I+ ++
Sbjct: 82 NPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIF 141
Query: 373 AGIIAIYGLVVAVLIA 420
A +A+YGL+V ++++
Sbjct: 142 AEALALYGLIVGIILS 157
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 198 bits (484), Expect = 3e-51
Identities = 96/150 (64%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Frame = +1
Query: 205 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 384
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 385 AIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 561
IYGL++AV+I + A Y + G +HL AGLA G LAAG AIG+VGDAGVR A
Sbjct: 66 GIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGVVGDAGVRANA 125
Query: 562 QQPRLFVGMILILIFAEVLGLYGLIVAIYL 651
QQP+LFVGMILILIFAE LGLYGLIV I L
Sbjct: 126 QQPKLFVGMILILIFAEALGLYGLIVGIIL 155
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 241 GAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 420
G A+ + A G A G G+ A + +P+L + I+ ++ A + +YGL+V ++++
Sbjct: 99 GLATGLCALAAGLAIGVV-GDAGVRA-NAQQPKLFVGMILILIFAEALGLYGLIVGIILS 156
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 157 bits (381), Expect = 1e-38
Identities = 72/111 (64%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
Frame = +1
Query: 223 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 402
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 403 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 552
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 74 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 124
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 463 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 642
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 16 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 75
Query: 643 IYL 651
+ +
Sbjct: 76 VII 78
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +1
Query: 322 SVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 420
+ +P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 158 NAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 93.9 bits (223), Expect = 1e-19
Identities = 50/147 (34%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Frame = +1
Query: 229 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 408
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 409 VLIAGALQEP----ANYP--LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 570
+++ L+ ++P L G+ +GL VGF+ L G +GI+G + AQ
Sbjct: 80 IILQTKLESVPTALVHHPESLRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSDAQNS 139
Query: 571 RLFVGMILILIFAEVLGLYGLIVAIYL 651
LFV +++I IF LGL+G+IV I +
Sbjct: 140 SLFVKILVIEIFGSALGLFGVIVGIIM 166
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 37.5 bits (83), Expect = 0.013
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = -3
Query: 606 ENKNKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLE 427
E +KN DE P LS+T C H+ YG+ G + + ++ VD P+V G+V +
Sbjct: 880 EKCSKNEHDEAPLGLSNT---CKEHE-YGDKGPENLTKPGEPASSVDVPYVNGIVD-NSD 934
Query: 426 GTSNQDSHDQTVDGNNTRHDD 364
+ S + TV T + D
Sbjct: 935 SVQEEPSVEATVSATETSNVD 955
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 623 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 474
R T+A +RI++ P N P PA+P +P A PAA P AP
Sbjct: 196 RKTTTAPVRIQLAPRNP----PPPAAPAAPPVPPAVPAAPAPAPVHMSAP 241
>07_03_1215 +
24937016-24937229,24937418-24937623,24938135-24938207,
24938619-24938812
Length = 228
Score = 31.9 bits (69), Expect = 0.67
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 527 PMAKPAARPENPTAKPAPKWM 465
P AKPAA+P+ P KP P+ M
Sbjct: 91 PAAKPAAKPKKPPVKPLPEMM 111
>06_03_0363 + 19904002-19905792
Length = 596
Score = 31.9 bits (69), Expect = 0.67
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +1
Query: 211 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTG-----IAAMSVMRPELIMKSIIPVVMA 375
PIY +GAA +FS+L + T +A ++R + + P +
Sbjct: 400 PIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLR 459
Query: 376 GIIAIYGLVVAVLIAGALQEPANYPL-YKGFIHLGAGLAVGFSGLAA 513
+A LVV I + + Y + G+ G G A G +GLAA
Sbjct: 460 TFLAFLALVVLSSIGVSAYYNSRYARRWPGYAAFGCGWAAGAAGLAA 506
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 31.5 bits (68), Expect = 0.89
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = -3
Query: 708 EARSTGDGSGVCSGRLFCVQVDGDDKSVKTQYFSENKNKNHSDE*PRLLSSTT--HACIS 535
E+ T G+ + + +Q+DG KS Y S++ S + +L++S + +
Sbjct: 2967 ESEDTVIGAEQGTVEVEAMQIDGISKS----YSSDSHATLQSSDSNQLVNSDSKFESSKK 3022
Query: 534 HDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNN 379
HD ET +++R S D+ K +VG N+D+ Q DG++
Sbjct: 3023 HDKTDETSNESRGDNPTHSCTNDDSHDKNLVGCSPSEDLNEDNSAQLADGDD 3074
>07_01_0469 - 3552409-3553368
Length = 319
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 623 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 474
R +T+A +RI++ P N PA+P +P A PA P P P P
Sbjct: 192 RKSTTAPVRIQLAPRNP----PPSAAPAAPPVPPAAPAV-PAAPALAPVP 236
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 424 ALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILI 597
AL+ P P+ +G + LG + V +GL +V A VRG GM+L+
Sbjct: 333 ALEAP---PMPRGSVGLGMAVRVAMAGLGTNRVAAVVSAAAVRGHNAGGGALEGMVLV 387
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 489 SQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDR 361
S+ ++ E KG+VG SNQ HD T D +T D++
Sbjct: 190 SRLDNKIAEVDTKGIVG-TKPSASNQHQHDGTTDSRHTVEDEK 231
>09_01_0019 + 403078-404211
Length = 377
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -3
Query: 402 DQTVDGNNTRHDDRNDRLHDQLRPHHRHXXXXXXXXXXXXXXXXGAEDDSRRRPHNSKEG 223
D T D + + +DR R H + + HHR + SRRR H E
Sbjct: 293 DDTSDEDESGGEDRRRRRHRKRQHHHRKGASDGDSGSGASDSADDRKRSSRRRRHRKSES 352
Query: 222 S 220
S
Sbjct: 353 S 353
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 315 RHVGDEA*ADHEVDHSCRHGGYYCHLRSGRGCPDCWCPP 431
R V + AD D CR G SG + +CPP
Sbjct: 16 REVSEALTADSSADEECRRGSSSSSASSGDASSESYCPP 54
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 602 IRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPA 477
+R R PT+ A PR P P A PAA P P+ P+
Sbjct: 701 LRARRAPTSPPAA-ATPRAPTPPAAAAAAPAAPPALPSGLPS 741
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 554 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 456
P PA MP P P PT P P W PL
Sbjct: 132 PPPPARTPMPTPTPTPTP-TPTRPPVPVWAAPL 163
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 420 WCPPGASQLPPLQRVHPLG 476
W PPG +LPPL +H G
Sbjct: 44 WAPPGEPRLPPLLLIHGFG 62
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 235 VMGAASAIIFSALGAAYGTAKSGTGIAA 318
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 560 AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 456
A P P P P PAA P P PAP+ P+
Sbjct: 219 APPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPM 253
>08_02_0341 +
15994817-15994852,15995371-15995439,15995667-15995973,
15996231-15996253
Length = 144
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 426 GTSNQDSHDQTVDGNNTRHDDRNDRL 349
G + + HD ++DG N +DD D L
Sbjct: 98 GAEDDNGHDVSIDGLNANNDDNGDEL 123
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 418 AGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 552
+GA EP P+ + G A+ F G AG A+G+VG++G R
Sbjct: 9 SGAAAEPPPTPVAR----YDRGGALIFGGRFAGVAVGVVGESGSR 49
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 623 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTA 486
R T+A +RI++ P N PA+P +P A PAA+ P +
Sbjct: 192 RKTTTAPVRIQLAPRNP----PPAAAPAAPPVPPAVPAAQAPAPAS 233
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 554 PRTPASPTMPMAKPAARPENPTAK 483
P TPA+PT P PA P PT K
Sbjct: 89 PATPATPTTP-PTPAPAPSTPTGK 111
>09_06_0223 + 21659549-21659729,21659888-21659979
Length = 90
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 760 YRRRPSLCAXSDSDNEHRGSEHGRRE 683
++RR S DNE +G +HGRRE
Sbjct: 35 WQRRKRDTNGSGKDNEGKGGQHGRRE 60
>05_03_0591 + 15892772-15893412,15893478-15893910
Length = 357
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 679 CVFRAFILCTGRWRR*VRKDPILQRK 602
C RA ++C RWRR + DP QR+
Sbjct: 28 CAVRASLVCK-RWRRLLTDDPCFQRR 52
>03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826
Length = 196
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 466 IHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 570
+HL G+AVG GL G + GD R A+ P
Sbjct: 160 VHLDVGVAVGDQGLEVGLL--VAGDEAERAQARAP 192
>03_01_0570 -
4205739-4205776,4205846-4205897,4205939-4206067,
4206183-4206258,4206360-4206412,4206494-4206555,
4206624-4206734,4206813-4206979,4207089-4207268,
4207598-4207687,4207773-4207921,4208367-4208501,
4208575-4208630,4208790-4208823,4209409-4209519
Length = 480
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +1
Query: 688 VARAPSLYAHYLSLXTRTGM---VVAGXGSTLH-RVSEHPSTLVYYICSLLVSHI 840
+ R+P + H LSL + GM +VA GS H + E+PS ++ + S+ ++ I
Sbjct: 21 IGRSPRMQYHSLSLANQAGMEVDIVANGGSDPHLLLRENPSIHIHEMKSVQLTGI 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,598,703
Number of Sequences: 37544
Number of extensions: 651250
Number of successful extensions: 2330
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2311
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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