Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_D20
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 388 e-108
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 388 e-108
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 388 e-108
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 388 e-108
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 388 e-108
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 388 e-108
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 388 e-108
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 388 e-108
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 388 e-108
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 386 e-108
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 372 e-103
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 242 2e-64
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 219 2e-57
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 172 3e-43
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 6e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 95 5e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 95 5e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 95 5e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 89 2e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 67 1e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.52
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.69
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.69
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.6
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 1.6
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 1.6
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 1.6
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 2.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 388 bits (955), Expect = e-108
Identities = 182/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 388 bits (955), Expect = e-108
Identities = 182/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAAL++DNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 388 bits (954), Expect = e-108
Identities = 181/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 388 bits (954), Expect = e-108
Identities = 181/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 388 bits (954), Expect = e-108
Identities = 181/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 388 bits (954), Expect = e-108
Identities = 181/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 388 bits (954), Expect = e-108
Identities = 181/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 388 bits (954), Expect = e-108
Identities = 181/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 90 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 149
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 150 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 209
Query: 755 FXQEMA 772
F QEMA
Sbjct: 210 FEQEMA 215
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1
Query: 139 KAGFAGXDAPRAVFPSIVGRPRHQG 213
+AGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 388 bits (954), Expect = e-108
Identities = 181/186 (97%), Positives = 185/186 (99%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 755 FXQEMA 772
F QEMA
Sbjct: 224 FEQEMA 229
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 386 bits (950), Expect = e-108
Identities = 180/185 (97%), Positives = 184/185 (99%)
Frame = +2
Query: 218 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 397
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 398 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 577
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 578 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 757
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 180
Query: 758 XQEMA 772
QEMA
Sbjct: 181 EQEMA 185
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 372 bits (916), Expect = e-103
Identities = 172/186 (92%), Positives = 181/186 (97%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 394
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 574
VLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HT
Sbjct: 103 VLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT 162
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
VPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA D
Sbjct: 163 VPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHD 222
Query: 755 FXQEMA 772
F E+A
Sbjct: 223 FESELA 228
Score = 81.4 bits (192), Expect = 7e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 100 VAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+AALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 242 bits (592), Expect = 2e-64
Identities = 107/181 (59%), Positives = 142/181 (78%), Gaps = 1/181 (0%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 391
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 392 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 571
PVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
Query: 572 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 751
VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+AL
Sbjct: 166 AVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLAL 225
Query: 752 D 754
D
Sbjct: 226 D 226
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRH 207
+V+DNGSG+ KAGFAG P+ F + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 219 bits (535), Expect = 2e-57
Identities = 99/178 (55%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Frame = +2
Query: 236 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 412
KD VG+E R +L + YP+++GI+ NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 413 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 592
PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEG 172
Query: 593 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFXQE 766
+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D QE
Sbjct: 173 FALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQE 230
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGXDAPRAVFPSIVGRP 201
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 172 bits (418), Expect = 3e-43
Identities = 83/193 (43%), Positives = 118/193 (61%), Gaps = 9/193 (4%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 391
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 392 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVL 547
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 548 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 727
DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IK
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIK 235
Query: 728 EKLCYVALDFXQE 766
EK CYV D +E
Sbjct: 236 EKFCYVCPDVMKE 248
Score = 34.3 bits (75), Expect = 0.098
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 106 ALVVDNGSGMCKAGFAGXDAPRAVFPSIV 192
A V+DNG+G K G+AG P+ + PS +
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (283), Expect = 6e-27
Identities = 52/126 (41%), Positives = 85/126 (67%)
Frame = +2
Query: 299 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 478
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 479 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 658
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 659 KILTER 676
++L ++
Sbjct: 214 QMLDQQ 219
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 95.1 bits (226), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 343
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.1 bits (226), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 343
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.1 bits (226), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 343
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 215 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 334
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +1
Query: 85 LCXXXVAALVVDNGSGMCKAGFAGXDAPRAVFPSIVGRPRHQG 213
+C VAALVVDNGSGMCKAGFAG DAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 67.3 bits (157), Expect = 1e-11
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)
Frame = +2
Query: 233 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 406
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 407 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 574
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQN 215
Query: 755 FXQEM 769
F + M
Sbjct: 216 FDESM 220
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 67.3 bits (157), Expect = 1e-11
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)
Frame = +2
Query: 233 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 406
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 407 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 574
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 575 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 754
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQN 215
Query: 755 FXQEM 769
F + M
Sbjct: 216 FDESM 220
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 60.9 bits (141), Expect = 1e-09
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +2
Query: 365 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 544
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 545 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 715
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 716 RDIKEKLCYVALDFXQE 766
R E+ YV D+ +E
Sbjct: 385 RFALEQTTYVPEDYQKE 401
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 564 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 469
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.69
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 251 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 430
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 431 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 583
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 709 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 575
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 263 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASXPAKPALHMP 129
GP P S P +P +P G P G +GAS P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 263 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASXPAKPALHMP 129
GP P S P +P +P G P G +GAS P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 263 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASXPAKPALHMP 129
GP P S P +P +P G P G +GAS P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 263 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASXPAKPALHMP 129
GP P S P +P +P G P G +GAS P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 263 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASXPA 150
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 199 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 318
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -1
Query: 281 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASXPAKPALHMP 129
G C P P P +P P G P G + +GA+ P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 139 KAGFAGXDAPRAVFPSIVGRPRHQG 213
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,281,676
Number of Sequences: 27780
Number of extensions: 313467
Number of successful extensions: 1381
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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